Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
5 5 5
6 4 4
8 4 4
3 13 13

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 37 56
Multiple Base Substitutions 0 0
Deletions 3 3
Insertions 3 4
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 43 63

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F0 I1 R1 9 0 49.5 2592944 92.4% 2395880 128.7
A5 F2 I1 R1 19 0 387.3 17406066 94.9% 16518356 146.3
A5 F21 I1 R1 19 0 233.2 10443104 95.9% 10014936 147.8
A5 F47 I1 R1 20 0 450.6 20852582 94.3% 19663984 143.5
A5 F85 I1 R1 24 0 413.5 17725300 96.1% 17034013 149.0
A6 F2 I1 R1 17 0 27.3 1221200 93.4% 1140600 148.2
A6 F13 I1 R1 17 0 500.9 23407912 93.4% 21862989 142.9
A6 F39 I1 R1 21 0 428.6 19430814 94.2% 18303826 145.6
A6 F90 I1 R1 26 0 359.5 16395400 94.7% 15526443 143.6
A8 F1 I1 R1 20 0 305.6 14112546 93.7% 13223455 143.8
A8 F38 I1 R1 22 0 383.9 17657484 93.6% 16527405 145.0
A8 F79 I1 R1 25 0 416.7 19229882 94.6% 18191468 142.7
A8 F92 I1 R1 25 0 426.8 18205940 96.3% 17532320 149.0

Mutation Needle Plot

Mutation Targets

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