| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | = 2152216 | 117 (2.050) | 3 (0.050) | 3/256 | 6.5 | 2.5% | coding (141/1245 nt) | fabF_1 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2 |
| ? | ACB143 | 2152220 = | 115 (2.040) | coding (145/1245 nt) | fabF_1 | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase 2 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCTGGCCGCAGTGGCATCGGTCCGATCGAACACACGGACCTGTCTGCCTACTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/2152080‑2152216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGTTTTGGCGGCTCGGTGAAAGGCTTCGAGGTTGAGCAGTACCTGTCGGCCAAAGAGGCCCGCAAGCTCGACCTGTTCATCCAGTACGGCCTGGCGGCTGGTTTCCAGGCCGTGCGTAATGCCGGCCTGGAGGTC > ACB143/2152220‑2152354 CGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCTGGCCGCAGTGGCATCGGTCCGATCGAACACACGGACCTGTCTGCCTACTCC > 2:328027/1‑137CGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCTGGCCGCAGTGGCATCGGTCCGATCGAACACACGGACCTGTCTGCCTACTCC > 3:190463/1‑137CGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCTGGCAGCAGTGGCATCGGTCCGATCGAACACACGGACCTGTCTGCCTACTCC > 4:186140/1‑137 AGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCCACTGGCATGGCATTCTGGCTGGCCGCAGTGGCATCGGTCCGATCGAACACACGGCCCTGTCTGCCTACTCCCcccc > 7:319200/1‑133 AGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCTGGCCGCAGTGGCATCGGTCCGATCGAACCCACGGCCCTGTCTGCCTACTCCaaccc > 8:13981/1‑132 GGCTGGCCGCAGTGGCATCGGTCCGATCGAACACACGGACCTGTCTGCCTACTCCCGTTTTGGCGGCTCGGTGAAAGG < 1:244173/78‑1 GGCTGGCCGCAGTGGCATCGGTCCGATCGAACACACGGACCTGTCTGCCTACTCCCGTTTTGGCGGCTCGGTGAAAGG > 2:244173/1‑78 CCCGTTTTGGCGGCTCGGTGAAAGGCTTCGAGGTTGAGCAGTACCTGTCGGCCAAAGAGGCCCGCAAGCTCGACCTGTTCATCCAGTACGGCCTGGCGGCTGGTTTCCAGGCCGTGCGTAATGCCGGCCTGGAGGTC > 4:79755/1‑137 CCCGTTTTGGCGGCTCGGTGAAAGGCTTCGAGGTTGAGCAGTACCTGTCGGCCAAAGAGGCCCGCAAGCTCGACCTGTTCATCCAGTACGGCCTGGCGGCTGGTTTCCAGGCCGTGCGTAATGCCGGCCTGGAGGTC > 6:63786/1‑137 CCCGTTTTGGCGGCTCGGTGAAAGGCTTCGAGGTTGAGCAGTACCTGTCGGCCAAAGAGGCCCGCAAGCTCGACCTGTTAATCCAGTCCGGCCTGGCGGCTGGTTTCCAGGCCGTGCGTACTGCCGGCCTGGAGGTg > 6:202254/1‑136 CGCGTAGACGCGTCGTGGTCACCGGTATGGGTATGCTGTCGCCACTGGGTACCGATGTACCGAGCACCTGGCAGGGCATTCTGGCTGGCCGCAGTGGCATCGGTCCGATCGAACACACGGACCTGTCTGCCTACTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/2152080‑2152216‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGTTTTGGCGGCTCGGTGAAAGGCTTCGAGGTTGAGCAGTACCTGTCGGCCAAAGAGGCCCGCAAGCTCGACCTGTTCATCCAGTACGGCCTGGCGGCTGGTTTCCAGGCCGTGCGTAATGCCGGCCTGGAGGTC > ACB143/2152220‑2152354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |