New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	= 5696718	85 (1.290)	3 (0.050)	3/260	7.4	3.4%	coding (3/1680 nt)	phaC_1	Poly(3‑hydroxyalkanoate) polymerase subunitPhaC
	?	ACB143	5702993 =	83 (1.260)					coding (3/420 nt)	CJ019_05350	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/5696619‑5696718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGCTGTGTACCTCATGCTCATGAGTGGTGGAAAACCGCCCATGGAGGCTGGGCTTGAGCATTAAGGTAGGGAAGAAAATTAGAAA  >  ACB143/5702993‑5703079                                                                                                                                                                                             TTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAGATGCATGCTGTGTACCTCATGCTCATGAGTGGTGGAAAA                                                     <  6:370595/136‑1                                                         ACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAGATGCATGCTGTGTACCTCATGCTCATGAGTGGTGGAAAACCGCCCATGGAGGCTGGGCTTGAGCATTAAGGTAGGGAAGAAAATTAGAAA  <  1:233538/131‑1                                                         ACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAGATGCATGCTGTGTACCTCATGCTCATGAGTGGTGGAAAACCGCCCATGGAGGCTGGGCTTGAGCATTAAGGTAGGGAAGAAAATTAGAAA  >  2:233538/1‑131                                                                                                                                                                                             TTCCTTATCACTGGTCACCCGAGTAGCAGTACCGGGCTCAGGGCTGTGCACCCGCCACAGCAACCGGTACTCGTCTCAGGACAACGGAGCGTCGTAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/5696619‑5696718 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGCTGTGTACCTCATGCTCATGAGTGGTGGAAAACCGCCCATGGAGGCTGGGCTTGAGCATTAAGGTAGGGAAGAAAATTAGAAA  >  ACB143/5702993‑5703079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.