| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | 1433054 = | NA (NA) | 22 (0.470) | 18/250 | 1.3 | 95.8% | intergenic (‑331/‑328) | yveA/CJ019_01212 | Aspartate‑proton symporter/IS110 family transposase ISPpu9 |
| ? | ACB143 | = 1837507 | 1 (0.020) | coding (343/2754 nt) | barA | Signal transduction histidine‑protein kinaseBarA | |||||
GCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATctcct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/1433166‑1433054‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATCGAGCTGTCGCACGACG < ACB143/1837507‑1837369 GCCCTACCGGGCCAACCCCCTTTTATTTTTAAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTAAACCTAATGTTTGCTGCCCGACCGCGCCGCCCGGAAGGGCGGGGTGATCTCCTTCAGCGCAGTGGCAACGAC > 4:37889/1‑137 AACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACC > 4:194417/1‑137 aaAAAATGTCAGCGTCGCGGCGGAACTGAAGCCGAACACCTCATGTTTGCGGCGCCACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGG < 2:164636/135‑1 ccGCCTTACCCCTCTTGTTTGCTCCGCCACTGCCCCGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCC < 8:113457/135‑1 CCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTG > 7:113457/1‑137 CCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTCGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTG > 4:273266/1‑137 TGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCTGCCACCACCGCGCCCTGGCAACCGACGCCGTGCCGGCCGAAGCCGAGC > 4:172604/1‑137 CGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTG > 7:99345/1‑137 GCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGC > 4:75054/1‑137 ccaccGCGCCGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCT < 5:110343/132‑1 CAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGG > 8:31435/1‑137 CGCAGCCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTAGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTG > 3:91674/1‑137 CCCGGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAG > 1:66121/1‑137 GGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGA < 3:234553/137‑1 GGAAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGA > 7:202033/1‑137 aatggaTGGGTGATCTCCAGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGGTTGCGCCCACCACCGCCACCTGGCCACCGACGCCGTGCGGGCCGAAGCCGAGCGCCTGGTGGGCTGGGTAGAGATC < 1:77966/131‑1 AAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATC > 4:32144/1‑137 AAGGGCTGGGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATC < 3:194417/137‑1 GGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATCGAGCTGTC > 6:61568/1‑137 GGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGG > 7:241573/1‑59 GGTGATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGG < 8:241573/59‑1 GATCTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATCGAGCTGTCGCA < 5:125430/137‑1 CCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGTCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATCGAGCTGTCGCACGACG < 6:298403/137‑1 CCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATCGAGCTGTCGCACGACG > 8:78693/1‑137 GCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATctcct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/1433166‑1433054‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTGCAGCGCAGTGGCAACGACGCCACCCGCTACCTGATGCCAGTTTTCGGCCACCACCGCGACCTGGCCACCGACGCCGTGCCGGCCGAAGCCGAGCGCCTGCTGGGCTGGGTAGAGATCGAGCTGTCGCACGACG < ACB143/1837507‑1837369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |