New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | ACB143 | = 4156202 | 35 (0.590) | 7 (0.130) | 7/226 | NT | 19.2% | coding (873/1314 nt) | pssA | CDP‑diacylglycerol‑‑serineO‑phosphatidyltransfer a se |
? | ACB143 | 4260095 = | 26 (0.470) | coding (803/1341 nt) | pcaK_3 | 4‑hydroxybenzoate transporter PcaK |
TCGTTCCAGATGCGTACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/4156065‑4156202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtagaagCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCG > ACB143/4260095‑4260227 TCGTTCCAGATGCGTACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAG > 3:76788/1‑135 CGTTCCAGATGCGTACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAG > 1:252903/1‑134 CGTTCCAGATGCGTACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAG > 3:272694/1‑134 CGTTCCAGATGCGTACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAG > 8:361028/1‑134 CCAGATGCGTACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAGAAGCC < 5:375248/135‑1 ACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAGAAGCCGAACATGAC > 3:64023/1‑134 GCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAG < 6:179830/136‑1 ACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCT > 1:131686/1‑136 CTGGCACTGAAAGGTTCGCCAGGGGCAATGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCC < 5:196816/136‑1 CTGAACGGTTCGCCAGGGGCAATGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGG < 2:131686/136‑1 GAACGGTTCGCCAGGGGCAATGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGACCCCGGTTTTGGCACCCTCTGCCCTTGCGGC > 3:271252/1‑135 CGGTTCGCCAGGGGCAATGTAGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAA > 1:152253/1‑134 AGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGC > 8:235328/1‑136 GAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGC < 6:365499/135‑1 GAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTGTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGC < 5:360350/135‑1 AAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCG < 5:86110/136‑1 TCGTTCCAGATGCGTACTTGCAACTGGCCGCTGGCAATCGCGGCGTGGCGGCGGTGGGCGAAGGCGCGCAGGTTGTCCTCGTACAGATAGGGCAATGCACCACTGGCACTGAACGGTTCGCCAGGGGCAATGTAGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/4156065‑4156202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtagaagCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCAATGCCG > ACB143/4260095‑4260227 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |