| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 3,365,199 | A→C | 6.2% | intergenic (‑87/‑32) | csoR ← / → CJ019_03165 | Copper‑sensing transcriptional repressor CsoR/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 3,365,199 | 0 | A | C | 6.2% | 668.2 / 3.7 | 281 | intergenic (‑87/‑32) | csoR/CJ019_03165 | Copper‑sensing transcriptional repressor CsoR/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (149/106); new base C (4/22); total (153/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.78e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 308 total aligned reads displayed.
TGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTC > ACB143/3365064‑3365333 | tgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGaacaa > 5:62205/1‑136 (MQ=255)tgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGaacaa > 8:134328/1‑136 (MQ=255)tgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGaacaa > 1:389278/1‑136 (MQ=255)tgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCACCTGGGGGGGATATGCTCAAACCAACTACCCCTTCAGaacaa > 3:261782/1‑136 (MQ=255)tgatATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGGCTCATGCATCGATGAAGTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGaacaa < 8:260737/136‑1 (MQ=255) tCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATc > 7:121626/1‑136 (MQ=255) gCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATcc < 1:106736/135‑1 (MQ=255) ttGGTGCTGATGGCCGTGTTCGTGATCGCTCATTCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCAt > 8:330352/1‑136 (MQ=255) gCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAacac > 3:185819/1‑136 (MQ=255) gCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAacac > 1:315603/1‑136 (MQ=255) tCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGc > 6:226486/1‑136 (MQ=255) tCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGc > 6:281582/1‑136 (MQ=255) tCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGc > 6:328244/1‑136 (MQ=255) gTGATCGCTCATGCCTTGAGTCTCATGCATCTATCAATTACGCACGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCACAACAACCATCCGCTTAGGCATCAAAACAAACACGACATGCTc < 7:28986/136‑1 (MQ=255) aTCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGc < 7:225179/136‑1 (MQ=255) tCGCTCATGCGTTGAGTCTCATGCATCTATTAATACCGGTCGCATCATACCCCCCGGGGGGGTATTTGGTCAAACCAACTACCCCTTCACAACACCCATCCGCTTCGGCAACAAAACAACCACGACATGCTCAGc < 6:358847/135‑1 (MQ=255) tCGCTCATGCCTTGAGTCTCATGCATCTATGAATTACGCTCGCATCCTATCCCCCTGGGGGGTATATGGTCAAACCAACTACCCCTTCACAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGc < 7:283182/135‑1 (MQ=255) tCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGc < 8:74635/135‑1 (MQ=255) cGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCaa > 1:357845/1‑136 (MQ=255) ccATGCCTTGAGTCTCATGCATCTAGCAATTCCGCTCCCATCCAAACCCCCTGGGGGGTATATGGTCAAACCAACTACCCCTTCACAACAACCACCCGCTTTCCCAACAAAACAACCACGACATGCTCAGCAAccc < 8:30486/135‑1 (MQ=255) cATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAAccc > 4:135756/1‑135 (MQ=255) aTGCCTTGAGTCTCATGCATCGATTAATTACGCTCGCATCCTATCCCCCTGGGGGGTATATGGTAAAACCAACTACCCCTTCACAACACCCCTCCGCTTCGGCATCAAAACAAACACGACATGCTCAGCAAccc < 7:109989/134‑1 (MQ=255) aTGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAAcccc > 4:91852/1‑135 (MQ=255) aTGCCTTGAGTCTCATGCATCGATGAAATACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTAAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCACCAAcccc > 6:124356/1‑135 (MQ=255) aTGCATTGAGCCTAATCAATCTATTAATTCCGCTCGCATCCTACCCCCGTGGGGGGTATATGGAAAAACCAACACCCCCTGCACAACACCCATCCGCTTCGGCAACAAAACAACCACGACATGCTCAGCAAccc < 2:139908/134‑1 (MQ=255) ctcATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAg > 5:335711/1‑136 (MQ=255) ctcATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAg > 5:314880/1‑136 (MQ=255) tGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCTCTAAGGTGa > 3:92466/1‑136 (MQ=255) tGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGa > 1:279465/1‑136 (MQ=255) tGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGa > 7:63080/1‑136 (MQ=255) tGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGa > 5:101389/1‑136 (MQ=255) gCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGAt > 4:392747/1‑136 (MQ=255) aaTCGATTAATTACGCTCGCATCCTATCCCCCTGGGGGGTATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTTGGAATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGAt < 6:144105/134‑1 (MQ=255) gATGAATTCCGCTCCCATCCTACCCCCCTGGGGGGTATATGGCAAAACCAACTCCCCCTTCACAACAACCACCCGCTTCCGAAAAAAACCAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTg < 6:10547/136‑1 (MQ=255) tGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGcc > 1:203026/1‑136 (MQ=255) aaTTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGccat > 7:378644/1‑134 (MQ=255) aaTTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCt > 2:361924/1‑136 (MQ=255) gCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGctct < 7:55346/136‑1 (MQ=255) gCTCGCATCATACCCCCCTGGGGGGTATATGGTCAAACCACCAACCCCTTCACAACAACCATCCGCTAAGGCATCAAAAGAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGctct < 1:72146/136‑1 (MQ=255) cTCGCATCCTATCCCCCTGGGGGGTATATGGTCAAACCAACTACCCCTTCACAACAACAATCCGCTTAGGCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTg < 8:228975/136‑1 (MQ=255) cctcATCCTCTCCCCGTGGGGGTTTTATGTAAAAACAAACACCCCATTCAAAACAACAATCCGTTAAGGCATCAAAATAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTgg < 2:205809/133‑1 (MQ=255) gCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 4:166460/1‑135 (MQ=255) gCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 7:85652/1‑135 (MQ=255) gCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTACAGAACAACCATCCGCTAAGGCATCAAAAGAAACACCACATACTCAGCAACCCCATCAGCACTAAGGTCATTTTTGCCCTAGCTCTCGc > 1:153634/1‑135 (MQ=255) tCCTATCCCCCTGGGGGGGATATGTAAAAACAAACTACCCCTTAACAACAACCATCCGCTTAGGCATAAAAATAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATc < 3:341697/136‑1 (MQ=255) tCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATc > 8:198065/1‑136 (MQ=255) ccTATCCGGCTGGGGGGTATTTGGTCAAACCAACTACCCCTTCTGAACAACGATCCGCTTCGGCCTCAAAAGAACCACGACATGCTCAGCAACCCCATCAGCTCTAAGGTGATTTTTGCCCTTGCTCTGGCCATCt < 8:186208/136‑1 (MQ=255) tCCCCGTGGGGGGGATTTGGTCAAACAAACTACCCCTTCAGAACAACCATCCGCTTCGGCATCAAACCAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGAt < 1:251249/136‑1 (MQ=255) tCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGa > 2:379157/1‑135 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGc > 5:150048/1‑136 (MQ=255) cccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGc > 8:251030/1‑136 (MQ=255) gtGGGGGGTATAGGGACAAACCAACTACCCCTACACAACAACCCCCGGCTTCGCCATAAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCt < 3:110014/135‑1 (MQ=255) cTGGGGGTTATATGGTAAAACCAACAACCCCTTCACAACAACCATCCGCTTAGCCATCAAAACAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCt < 3:391426/136‑1 (MQ=255) cTGGGGGTGATTTGGTCAACCCAACAACCCCTTCAGAACAACCATCCGCTTCGCCCTCAAAACACACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCt < 4:287055/136‑1 (MQ=255) cTGGGGGGGATATGGACAAACCCACTCCCCAATCACAACAACCATCCGCTTAGGCATCAAAACAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCt < 7:353863/136‑1 (MQ=255) tGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTg > 2:68000/1‑136 (MQ=255) gggggggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCCACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTgg > 5:394249/1‑136 (MQ=255) gggggggATATGGTCAAACCAACTACCACTTCAGAACAACCATCCGCTTAGGAATCAAAAGAAACACGACATGATCAGCAAACCCATCAGAACTAAGGTGATTTTTGCACTTGATCTGGCCAGATTGAGAGACTgg > 2:168957/1‑136 (MQ=255) gggggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGCAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGc > 6:85033/1‑136 (MQ=255) gggggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGc > 2:225153/1‑136 (MQ=255) gggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCg > 3:355250/1‑136 (MQ=255) gggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCg > 3:123101/1‑136 (MQ=255) gggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCg > 2:338683/1‑136 (MQ=255) gtatatGGACAAACCAACAACCCCTTCACAACACCCATCCGCTTAGCCAACAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg < 3:401470/134‑1 (MQ=255) ggATATGGTCAAACCAACTCCCCCTTCAGAACAACCATCCGCTTAGGCATCAAACGAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg < 8:57710/136‑1 (MQ=255) ggATATGGTCAAACCAACAACCCCTTCACAACACCCATCCGCTTAGGCATCAAAACAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg < 2:112463/136‑1 (MQ=255) tatGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGca > 4:139925/1‑136 (MQ=255) atGGTCAAACCAACTACCCCTTCAGACCAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGCAGATTTTAGCCCTTGCTCTGGCCATCTTGATAGCCTGGCCCGGGcaa > 2:298979/1‑135 (MQ=255) tGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGcaca > 7:129417/1‑136 (MQ=255) ggTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCacac > 6:200530/1‑136 (MQ=255) ggTAAAACCAACTACCCCTTCAGAACAACCATCCGCTTCGGATTAAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGcaca < 1:46908/135‑1 (MQ=255) aaacaaacTACCCATTCACAACAACCATCCGATTAGGCATAAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 5:273800/136‑1 (MQ=255) aaaCCAACTACCCCTTCAGAACAACCATCCGCTTAGGAATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 3:144764/136‑1 (MQ=255) aaaCCAACTACCCCTTCAGAACAACCATCCGCTAAGGAATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 5:128848/136‑1 (MQ=255) aaaCCAACTACCCCTTCAGAAAAACCATCCGCTTAGGAATAAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 8:154745/136‑1 (MQ=255) aaaCCAACTACCCCTTCACAACAACCATCCGCTTAGGCATCAAAAAAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 2:41675/136‑1 (MQ=255) aaaCCAACTACCCCATCACAACAACCATCCTCTTACTCATCAAAATAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 7:145685/136‑1 (MQ=255) aaaCCAACACCCCCTACACACAAACCATCCGCTTACCAATAAAAACACACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 1:380346/136‑1 (MQ=255) aaaCCAACAACCCCTTCAGAACAACCATCCGCTTACCCAACAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 3:65906/136‑1 (MQ=255) aaaCCAAAAACCCCTACACAACAACCATCCCCTAAGGCAAAAAACCAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 3:317300/136‑1 (MQ=255) aCCAACTACCCCTTCAGAACACCCATCCGCTTAGGAATCAAAACAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTgc < 7:347016/136‑1 (MQ=255) ccAACTACCCCTTCATAACAACCATCCGCTTCGCCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTgcg < 4:197142/136‑1 (MQ=255) ccAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTgcg > 7:237808/1‑136 (MQ=255) cAACTACCCCTTCAGAACAACCATACGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTgcgc > 1:126628/1‑136 (MQ=255) aaCTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct > 6:345078/1‑131 (MQ=255) aaCTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGct > 4:3298/1‑136 (MQ=255) aaCTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGct > 3:80760/1‑136 (MQ=255) aaCTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGct > 3:207890/1‑136 (MQ=255) ctcccccTTCCCAACAACCATCCGATTAGCCATCAAAATAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGctct < 6:48372/133‑1 (MQ=255) ccccTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct > 8:211794/1‑126 (MQ=255) ccccTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTa > 8:92160/1‑136 (MQ=255) ccTTCATAACAACAATCCGATTAGGAATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATg < 5:184057/136‑1 (MQ=255) aGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTc > 5:210925/1‑136 (MQ=255) aGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTc > 2:282595/1‑136 (MQ=255) gAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTc > 7:189951/1‑135 (MQ=255) gAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTc > 8:225641/1‑135 (MQ=255) gAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCg > 6:150741/1‑136 (MQ=255) aacaacCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTc > 4:223689/1‑134 (MQ=255) caacCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGt > 3:299925/1‑136 (MQ=255) aaacCATCAGCTTCGGCATCAAAACACACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGt < 1:383773/135‑1 (MQ=255) | TGATATCGCTATGACTTTGGTGCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTC > ACB143/3365064‑3365333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |