| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 4,805,214 | A→C | 16.3% | intergenic (+141/‑608) | dsbG → / → CJ019_04513 | Thiol:disulfide interchange protein DsbG/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 4,805,214 | 0 | A | C | 16.3% | 298.6 / 4.6 | 147 | intergenic (+141/‑608) | dsbG/CJ019_04513 | Thiol:disulfide interchange protein DsbG/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (74/40); new base C (2/26); total (76/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 149 total aligned reads displayed.
TGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCTGATCGGGGGTG > ACB143/4805080‑4805349 | tggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCaa < 5:190300/135‑1 (MQ=255) ggtggGGCACAGATCGAGCGCCTGGAATCAGGCGACGTGGGGCATGTCACCGGCTACTACGGTGTTCTCGGGTGAACCAGCTACTACGGGGCTCGCTCTAACGGCTGGGTTTTGCGACAGGCCCGTGATCGCAAgg > 8:298714/1‑136 (MQ=255) ggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCCTGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTACAGGCTGGGTTTTGCGCCAGGCCCGGGGTCGCAAgg > 6:262007/1‑136 (MQ=37) ggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAgg > 8:196350/1‑136 (MQ=255) ggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAgg > 1:47877/1‑136 (MQ=255) ggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAgg > 3:318774/1‑136 (MQ=255) ggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAgg > 7:160575/1‑136 (MQ=255) ggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAgg > 4:210064/1‑136 (MQ=255) ggtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCCCTCCTACGGGGCGCGCGCTAACGGCTGGGTTTTTCGCCCGGCCCGTGATCGCAAgg > 7:261215/1‑136 (MQ=255) gtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTATCGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGc > 6:321746/1‑136 (MQ=255) gtggGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCCCGCCCACGGGGCGCGCGCTAACGGCGGGGTTTTGCGCCAGGCCCGGGATAGCAAGGc > 3:64402/1‑136 (MQ=37) ggggCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCt > 3:22939/1‑136 (MQ=255) ggggCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCt > 1:327191/1‑136 (MQ=255) ggggCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCt < 1:87248/136‑1 (MQ=255) ggCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgc > 2:194641/1‑136 (MQ=255) gCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcg > 2:227016/1‑136 (MQ=255) gCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcg < 6:266739/136‑1 (MQ=255) gCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcg > 1:89742/1‑136 (MQ=255) gCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcg < 6:97571/136‑1 (MQ=255) gCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcg > 5:360033/1‑136 (MQ=255) cacaGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcgc > 8:379358/1‑136 (MQ=255) acaGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGcgcg < 2:4834/136‑1 (MQ=255) acaGATCGAGCGCCGGGACGCAGGCGACGTGTGGCAGGGCACCGGCTACGCCGGTTTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGcgcg < 8:245633/136‑1 (MQ=38) aTCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCg > 6:291255/1‑136 (MQ=255) tCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCgg > 7:86842/1‑136 (MQ=255) cGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCCCCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCGGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGc < 4:81517/136‑1 (MQ=255) gAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGcc > 5:124420/1‑136 (MQ=255) gAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGcc > 7:220946/1‑136 (MQ=255) gAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGcc > 6:196628/1‑136 (MQ=255) cgcCGTGAAGCAGGCGACGGGGGGCAGGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑a < 7:324656/136‑1 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGTACCCCCTGCTACGGGGCTCGCCCAAACCGCTGGGGTTTTCGCCCCGCCCCGGCTAGCAAGGCCAGCGCGGGCCGCCG‑G‑Ag > 3:49061/1‑136 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGcccttg > 5:83395/1‑132 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGccctgg > 1:275415/1‑132 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCggtg > 1:396059/1‑133 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑ttg > 6:293277/1‑134 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑ttg > 4:399762/1‑134 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑tgg > 5:122572/1‑134 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑Ag > 7:106918/1‑136 (MQ=255) gcCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑Ag < 3:285279/136‑1 (MQ=255) ccgggcaaGCAGGCGCCGGGGGGCATGGCACCGGCTACGCCGGTGGTCGCGGGCGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCGGCGCGGTCGGCCG‑T‑Ag < 1:206470/130‑1 (MQ=255) ccGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGTACCCGCACCGAAGGGGCTCGCGCTAACCGCTGGGTTTTGCGCCAGGCCCCTGCACGCCAGGCCTGCGCGGTCGGCCG‑ttg > 5:354757/1‑133 (MQ=25) aaGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑TGGGG‑C‑g‑g > 6:72325/1‑136 (MQ=255) aaGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑GGGGG‑C‑g‑g > 5:220371/1‑136 (MQ=255) aCGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑ATGGG‑C‑GCGGGTTAccg > 1:14677/1‑135 (MQ=38) aCGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGCG‑CGG‑GGTTTAccc > 7:89914/1‑136 (MQ=255) ggggCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCC‑T‑AGGGG‑CGG‑GGTTTACCcccg > 1:384078/1‑135 (MQ=38) tGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑TGGGG‑CGG‑GGGTTACCGCCGAAGGGGc > 8:304955/1‑136 (MQ=37) aCCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGCGCC‑G‑GGTTTACCCCCGCATGGCCCgcc > 6:162048/1‑134 (MQ=38) cTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCCGCGCGGTCGGCCG‑TGGGGGG‑C‑G‑GGGTTGCCCCCCAAGGGCCCggccagcc > 6:118411/1‑130 (MQ=37) cGCCGGTGTTCGCGGGGTAACCCGCTCCTACGGGGCTCGCGCAAACGGCTGGGTTTTGCGCCCGGCCCGTGAGCGCACGGCCGGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGc < 5:293775/136‑1 (MQ=37) ttCGCGGGGGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTc < 7:379339/135‑1 (MQ=255) tCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcg > 5:233223/1‑77 (MQ=255) tCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTgcg < 6:233223/77‑1 (MQ=255) cgGGTTAACCCGCTCCTACGGGGCGCGCGCTAACGGCGGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTccacca < 7:195932/136‑1 (MQ=255) gttaccccGCTCCTACGGGGCGCGGGATACCGGGTGGGTTTTGCGCCCGGCCCGTTATGGCACGGCGTGCGGGGTGGGCCT‑T‑TGGTG‑G‑G‑GTTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGcc < 7:73580/131‑1 (MQ=16) gttaaCCCGCTCCTACGGGGCGCGGGCTAAGGGGTGGGTTTTGCGCCTGGCCCGTTATCGCACGGCCTGCGCGGTCGGCCG‑T‑TGGTG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGcc < 6:354757/133‑1 (MQ=21) cTAGGGGGCTCGCGCTACCGGCTGGGTTTGGCGCCAGGCCCGTGAGCGCACGGCCGGCGCGGGCGGCCG‑T‑AGGCG‑G‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTgc < 8:261215/136‑1 (MQ=21) gggggCGCGCGCTACGGGCTGGGTTTTGCGCCTGCCCGGTTAGCGCACGGCGGGCGGGGTCGGCGG‑T‑AGGCG‑G‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTgccgc < 3:355377/135‑1 (MQ=18) gggCTCGGGCAAACGGCGGGGTTTTGCGCCAGGCCGGTCATCGCACGGCCTGCGCGGGCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTgccgccg < 6:181743/136‑1 (MQ=18) gggCTCGCGCTACCGGCGGGGTTTTGCGCCAGGCCGGTGATCGCAAGGCCTGCGCGGGCGGCCG‑T‑AGGCG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTgccgccg < 7:259190/136‑1 (MQ=21) gggCTCGCGCTACCGGCGGGGTTTTGCGCCAGGCCGGTGATCCCACGGCCTGCCGGGTCGGCCG‑T‑AGGAG‑G‑G‑GTTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTgccgccg < 6:438/136‑1 (MQ=21) gggCGCGCGCTAACGGGTGGGTTTTGCGCCAGGCCCGTGATCGCACGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTgccgccg < 7:371438/136‑1 (MQ=255) gggCGCGCCCTAAGGGCGGGGTTTTGCGCCAGGCCCGGTAGCGCACGGCGGGCGGGGTGGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTgccgccg < 8:43353/136‑1 (MQ=18) ggCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑GGGGGCC‑G‑GGGTTACCC‑CGCAAGGGGCGG‑GCCCGCGGGGCCAATTAACACCACCCGTTCCCCGGTgcccccc > 5:111645/1‑135 (MQ=255) gCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGGG‑C‑G‑GGGTTAACCGCGCAAGGGCCGG‑GCCGGC‑GGGGCCAATTCAACCAGCCGGTCACCCGTgccgccccc > 1:251729/1‑136 (MQ=255) gcgcTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCGTT‑GGGGG‑G‑G‑GGTTTTCCCCGGAAGGGGCCGC‑CCGGGG‑GGGCCAATTTGC‑CCAGCCGGGGACCGGTggcgccggccccg > 5:80154/1‑130 (MQ=255) gcgcTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑TGGGGCC‑G‑GGTTTACCGCCCAACGGGCGGG‑CCGGGG‑GGGCCAATTACC‑CCACCCGGGAACCCTTgccgcccccccag > 5:256827/1‑132 (MQ=255) gcgcTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGGTTACCCCCGAAAGGGCCCG‑CCCAGC‑TGGCCCATTTACCCCAGCCGGTCCCCGGTTCCCCCGCCCCTg > 8:95058/1‑136 (MQ=255) gcgcTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGGTTACCCCCCAAATGGGCGG‑CCCAGC‑GGGCCAATTTCCCCCCGCCGGTCCCCCTTgccgccgccccag > 7:307852/1‑132 (MQ=21) gcTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑TTGAG‑CGG‑GGTTTACCC‑CGCAAGGGGCGG‑CCCATC‑GGGGCAATTTTCACCCGGCGGTGACCGGTggcgccgccccagtt > 7:220033/1‑130 (MQ=255) gcTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑TGGGGCC‑G‑GGTTTACCCCGCAAGGGGCCGG‑CCGGGG‑GGGCCAATTTCCCCCGCCCGTGACCCGTT‑CCGCCGCCCCAGTa > 2:211403/1‑136 (MQ=255) gcTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGCG‑CGG‑GGTTTACCCCGCAAGGGGCCGG‑CCCGCG‑GGGCCAATTGCC‑CCCGCCGGTGACCGGTgccgccgccccagtt > 4:304833/1‑130 (MQ=255) gcTAACGGCGGGGTTTTGCGCCAGGCCGGTTATCGCACGGCCGGCGCGGTCGGCGG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTa < 2:47952/136‑1 (MQ=18) gacagcGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTa < 2:322679/131‑1 (MQ=255) tgTTTTGCGCCAGGCCGTTTTGCGAAAGGCCTGCGCGGTGGGCCG‑T‑AGGTG‑G‑G‑GTTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTaa < 6:85619/135‑1 (MQ=14) ggTTTTGCGCCAGGCCGGTGAGCGCAAGGCCGGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTaa < 4:287217/136‑1 (MQ=255) ggTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTaa < 8:89059/136‑1 (MQ=255) ggTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTaa < 8:312986/136‑1 (MQ=255) ggTTTTCCGACCGGACCGTGATCGCACGGCCTGCGCGGTCGACCG‑T‑AGGGG‑C‑G‑GTTTTACCAGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCATCCGTTCACCGTTGACGCCGCCACTGTATTCGC‑GGTTaa < 8:113411/136‑1 (MQ=17) ggTTTGGCCCCTGCCCCGTTATCCCACGGCCGGCGCGGTGGGCCT‑T‑AGGCG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTaa < 2:307684/136‑1 (MQ=17) gTTTTGCGCCTGGCCCGTGATCGCATGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑G‑G‑GGTTTACCCGCGAAAGGGCGGG‑ACGGGC‑TGGCAAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTaaa < 7:188788/136‑1 (MQ=18) gTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑C‑GGTTTTCCCCCGAAAGGGCCCG‑GCCGGC‑GGGCCAATTTACACCCGCCCTTGACCCGTGCCGCCGCCACAGTATTAGC‑GGGGaa > 8:312917/1‑135 (MQ=255) ttGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑TGGGG‑CGG‑GGTTTACCC‑CGCAAGGGGCGGCCCCGGG‑GGGCCAATTGCC‑CCCGCCGGTGACCGGTTGCGCCGCCCCTGTTTTAGCGGGGTAAAcc > 2:241283/1‑136 (MQ=255) gcCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTa < 7:153932/117‑1 (MQ=255) gcCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTa > 8:153932/1‑117 (MQ=255) ccggCCGGTGATCTCACGGCCGGCGGGGCCGGCCG‑T‑AGGCG‑G‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCt < 3:329533/134‑1 (MQ=17) ccggCCCGTGATCGCAAGGCCGGCGCGGTCGGCGG‑T‑CGGAG‑C‑G‑GTTTAACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCt < 2:372510/134‑1 (MQ=17) cAGGCCCGTGATCGCCCGGCCTGCGCGGGCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCt < 4:306195/136‑1 (MQ=255) cAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑TGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCt < 2:292270/136‑1 (MQ=255) cAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCt < 8:106918/136‑1 (MQ=255) cAGGCCCGTGACCGCAAGCCCGCCGCGGGCGGCGT‑T‑CGCCG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGATCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCt < 5:100578/136‑1 (MQ=17) gCCCGTGATCGCACGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACg < 8:195716/136‑1 (MQ=255) cggttaTCCCACGGCCTGCGCGTGCGGCGT‑T‑AGGAT‑C‑G‑GTTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCTTTCACCGTTGCCTCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCt < 8:157855/131‑1 (MQ=14) ccGTGATCGCACGGCCGGCGCGGTCGGCCG‑T‑AGGCG‑G‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCt < 7:75202/136‑1 (MQ=255) ccGTCAGCGCACGGCCGGCGCGGTGGGCGG‑T‑AGCAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCt < 3:278435/136‑1 (MQ=17) gTGATCGCACGGCGGGCGGGGTCGGCCG‑T‑AGTAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCTGa < 4:267657/136‑1 (MQ=17) aTCGCACGGCCGGCGGGGGCGGCGG‑T‑AGCCG‑G‑G‑GTTTAACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCTGATc < 2:89742/135‑1 (MQ=17) tCGCATGGCGGGCGGGGGGGGCGG‑T‑TGGCG‑G‑G‑GTTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCTGATCg < 5:196628/135‑1 (MQ=14) cGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGCG‑G‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCTGATCgg < 6:358066/135‑1 (MQ=255) cAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCTGATCggggg < 1:233371/136‑1 (MQ=255) | TGGTGGGGCACAGATCGAGCGCCGTGAAGCAGGCGACGTGGGGCATGGCACCGGCTACGCCGGTGTTCGCGGGTGAACCCGCTCCTACGGGGCTCGCGCTAACGGCTGGGTTTTGCGCCAGGCCCGTGATCGCAAGGCCTGCGCGGTCGGCCG‑T‑AGGAG‑C‑G‑GGTTTACCCGCGAAAGGGCCGG‑ACCTGC‑TGGCCAATTTCCACCAGCCGTTCACCGTTGCCGCCGCCACTGTATTCGC‑GGGTAAACCCGCTCCTACGCTGATCGGGGGTG > ACB143/4805080‑4805349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |