Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | ACB143 | 5,768,328 | 0 | T | G | 31.9% | 83.7 / 13.5 | 71 | E610A (GAG→GCG) | caiT | L‑carnitine/gamma‑butyrobetaine antiporter |
Reads supporting (aligned to +/- strand): ref base T (10/37); new base G (22/0); total (34/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.10e-10 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
ATCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGCCCTGCGTCTG > ACB143/5768198‑5768461 | aTCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCctcgctcg < 3:21850/137‑1 (MQ=255) aTCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCctcgctcg < 8:231568/137‑1 (MQ=255) aTCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCctcgctcg < 2:186281/137‑1 (MQ=255) aTCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCctcgctcg < 6:224323/137‑1 (MQ=255) aTCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCctcgctcg < 1:27263/137‑1 (MQ=255) aTCGAGCACATCACGCACGATCTGGGCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCctcgctcg < 5:42605/137‑1 (MQ=255) tCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCgg < 1:259657/137‑1 (MQ=255) tCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCgg < 1:81195/137‑1 (MQ=255) tCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCgg < 2:40568/137‑1 (MQ=255) ccGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCgg < 1:465221/136‑1 (MQ=255) gAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGGGGGGCGCTCGgcg > 1:30260/1‑137 (MQ=255) gAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGGCGCGCGCgggg > 4:21850/1‑135 (MQ=255) gAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCgcggcg > 2:96589/1‑137 (MQ=255) gAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCgcggcg > 2:387822/1‑137 (MQ=255) gAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGgcg > 4:24097/1‑137 (MQ=255) gAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCTCGgcg > 7:372911/1‑137 (MQ=255) gAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGACTTCATGAAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTAAGGCTCACCCTCGACCGGCGCCGAGATCGgcg > 2:93027/1‑137 (MQ=255) caTCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCTCGGCGCGGcc > 6:127789/1‑137 (MQ=255) tCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCat < 5:297313/137‑1 (MQ=255) tCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCat < 6:228220/137‑1 (MQ=255) acacgcacgATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCat < 1:423318/136‑1 (MQ=255) tggtctggGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGCCCGGGGGGGCGCGCGGCGCGGCCCGATAGCCGACAAg > 7:83690/1‑137 (MQ=255) tggtctggGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAg < 6:219269/137‑1 (MQ=255) tggtctggGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAg < 1:120352/137‑1 (MQ=255) tggtctggGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCTGGGCGGGGCCCTAGAGCCGGCAAg > 4:378187/1‑137 (MQ=255) tggGGCAAAGCCCATCAGGTCGTACTTCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCGCGGCGCGGCCCGCGAGCAGTCAAGGCTCa > 5:104041/1‑137 (MQ=255) tggGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGGGGCGCGGGGGGGGCGGCCCGAGAGCCGTCGAGGCtgc > 5:58527/1‑135 (MQ=255) tggGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGGCGCGCGCGGCGCGGCGCGATATCCGTCACGGGTcc > 7:144706/1‑136 (MQ=255) tggGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCCGATAGCCGGCAAGGCTcc > 5:371360/1‑136 (MQ=255) cAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCGCGGCGCGGCCCTATAGGCGGCAAGGCTGCCTTCg > 2:460776/1‑137 (MQ=255) aaaGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCACGCTCGGCGCGGCCATATAGCCGTCAACGCGCAcgtcgt > 8:89837/1‑137 (MQ=255) gCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTTGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGa < 3:163442/137‑1 (MQ=255) gCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGa < 2:292339/137‑1 (MQ=255) gCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGa < 2:133636/137‑1 (MQ=255) cccATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCGCCGCGCGGGCAGAAAGCCGTCAAGGCGCACATCGTAGaa > 6:440588/1‑136 (MQ=255) cccATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCGCGGCGCGGCCCTATAGACGTCAAGGCTCCCAGCGTAGAc > 1:14070/1‑137 (MQ=255) ccATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGGGGCGCGCGGGGCGCGGCCCGAGAGCCGGCACGGCGAACGTGGTAGACg > 4:228091/1‑137 (MQ=255) ggTCGTACTCCTGACTGCCGTCATGCACGTAGACATCGGCGCGGTAGAACCGCTGGGGCAGTTCAGGGTCAACCTCGACCGGCGCCACGCTCCGGGCCGCCAAATAGACCTGAACGCTCCCATCGGAGACgccacgg > 4:88068/1‑131 (MQ=255) tCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGtt < 3:323419/137‑1 (MQ=255) tCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGtt < 2:229875/137‑1 (MQ=255) tCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGtt < 3:385401/137‑1 (MQ=255) gTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGGCGGGGGGGGGGGGGGCCGATAGCCGTCGCGGCGCACAGAGAAGACGAACGGGtggg > 5:371402/1‑134 (MQ=255) gTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGc < 6:341796/137‑1 (MQ=255) aCTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCCCCGCGCGGCCCGAAAGACGGCAACGCTCCCAACGGAGAAGAACGGCATGccc > 2:10055/1‑137 (MQ=255) cTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCct < 7:248328/137‑1 (MQ=255) cTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCct < 6:20603/137‑1 (MQ=255) cTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCGGGCGCAGTGCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCct < 2:235722/137‑1 (MQ=255) aCTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCGCGGCGCGGCCATATATCCGTCAAGGCTCACGTAGTTGACGCACGGGTTGGCCGCTTCca > 2:415940/1‑137 (MQ=255) tGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCTCGGCGCGGGCATTTAGACGTCAACGCGCACTTCGTAGACGCACGGGGTGCCCTCTTCcatg > 2:175672/1‑136 (MQ=255) cATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTAcatcaaaacc > 2:361676/1‑132 (MQ=255) gACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGCACGGGGTGCCCTCGTACAACAT‑AAACCCCAAGcccc > 8:428712/1‑136 (MQ=255) cgcgGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCTCGGCGCGGCCATATAGCCGTCAATGCTCACTTCGTAGACGAACGGGTTGCCCGCTTCCATCATACACCC‑CACGCCCATAAGGttt > 4:16567/1‑136 (MQ=255) cgGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCTAAAGCCCATCAGGTTgcg < 1:10055/137‑1 (MQ=255) cgGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTgcg < 5:81253/137‑1 (MQ=255) cgGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTgcg < 4:175744/137‑1 (MQ=255) cgGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTgcg < 5:423611/137‑1 (MQ=255) cgGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCGCGCTCGGCGCGGCCCTATAGCCGTCAAGGCTCACTTCGTTGAGGAACGGGTTGCCCGCTTGCATCAT‑CACCCGCAAGCCCAGCAGGTTgcg > 6:482576/1‑137 (MQ=255) aGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGt < 3:378187/137‑1 (MQ=255) gCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCAcc < 6:104041/137‑1 (MQ=255) cTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCt < 6:371402/137‑1 (MQ=255) tCACCCTCGACCGGCGCCGCGCGCGGCGCGGCCATATAGCCGGCAACGCTCACTTCGGAGACGAACGGGGGGGCCGCTGCCATCAT‑CACCCCCAACCCCCTCAGGGTTCGCGACTGGCCAACGCGGGGTTGCAACTc > 8:396740/1‑137 (MQ=255) cTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGc < 3:228091/137‑1 (MQ=255) cTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGc < 5:232833/137‑1 (MQ=255) cTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGc < 1:481668/137‑1 (MQ=255) cTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGc < 1:198517/137‑1 (MQ=255) cTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGc < 4:355794/137‑1 (MQ=255) cTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGc < 1:255636/137‑1 (MQ=255) cTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGc < 1:415940/137‑1 (MQ=255) tCGACCGGCGCCTCGCTCGGCGCGGCCAAATAGCCGTCAAGGCTCACTTGGTAGACGCACGGGGTGGCCTCTTGCATCAT‑CACCCGCAAGCCCATCAGGTTGGGCGCCTGGCCACCGCGGGGTTGCACCTCGAAGcc > 4:324561/1‑137 (MQ=255) tCGACCGGCGCCTCGCTCGGCGCCGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGGCCGCGTCCATCAT‑CCACCGCAAGCCCATCACGTTGGGCGCCTGGGCACCGCGGGGTTCCCCCTCGCAGcc > 4:46485/1‑137 (MQ=255) tCGACCGGCGCCTCCCACGGCCCGGCCATAAACCCGTCAAGGCTCACTTCGTATACGAACGGGGAGCCGACATACCTCAT‑GAACCGCAAGCCCCTCACGATTCGCGACTCGCCAACGCCGGGTTACACCTCGAAGcc > 6:301889/1‑137 (MQ=255) tCGACCGGCGCCGCGCTCGGCGCGGCCCAATATCCGTCAAGGCTCACTTCGGAGACGAACGGGTTGCCCGCTTCCATCCT‑AACCCGCAAGCCCATAAGGTTGCGGGCCTGGCCAACGCCGGGTTGCACAGCGAAGcc > 8:470872/1‑137 (MQ=255) tCGACCGGCGCCGCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGGTGGCCACGTGCATCAT‑CACCCGCAAGCCCCTCAGGTTGGGCGCCTGGCCCACGCCGGGTTCCACCACGAAGcc > 2:335629/1‑137 (MQ=255) cGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGccc < 5:71080/137‑1 (MQ=255) ggCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGCCCTGCGt < 2:74452/137‑1 (MQ=255) ggCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGCCCTGCGt < 6:466528/137‑1 (MQ=255) gcCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGCCCTGCGTCTg < 4:56871/137‑1 (MQ=255) | ATCGAGCACATCACGCACGATCTGGTCTGGGGCAAAGCCCATCAGGTCGTACTCCTGACTGCCGTCATGCAGGTAGACCTCGGCGCGGTAGAAGCGCTGGCGCAGTTCAGGCTCACCCTCGACCGGCGCCTCGCTCGGCGCGGCCATATAGCCGTCAAGGCTCACTTCGTAGACGAACGGGTTGCCCTCTTCCATCAT‑CACCCGCAAGCCCATCAGGTTGCGCGACTGGCCAACGCGGGTTTCCACCTCGAAGCCCTGCGTCTG > ACB143/5768198‑5768461 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |