| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | = 3376605 | 53 (1.120) | 25 (0.530) | 20/242 | NT | 29.8% | coding (501/546 nt) | CJ019_03184 | hypothetical protein |
| ? | ACB143 | = 4765778 | 65 (1.370) | coding (6629/10413 nt) | grsB | Gramicidin S synthase 2 | |||||
TTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/3376475‑3376605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGG < ACB143/4765778‑4765657 TTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAG > 7:85522/1‑136 GGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCC > 1:319027/1‑135 CGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTAACTCGGCATGACCCCTACAGGGCCTGGTTG < 1:78924/125‑1 CGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTAACTCGGCATGACCCCTACAGGGCCTGGTTG > 2:78924/1‑125 AGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGG < 8:151657/136‑1 AGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGC < 3:293713/135‑1 GGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCC > 1:124268/1‑136 GGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGC > 7:6974/1‑135 GGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGC > 6:112931/1‑135 TTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGA > 7:159109/1‑136 CGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGACTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGAGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCAC > 6:270651/1‑136 GTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACC > 5:123447/1‑136 AATAGCTTTGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACCGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTT < 6:260413/136‑1 AATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTT < 5:150978/136‑1 AATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTT < 6:15356/136‑1 ATAGCGTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTCCAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTG < 4:40381/136‑1 AGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGG > 6:243618/1‑135 AGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGAC > 5:122418/1‑136 GAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCAAGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTG > 7:276072/1‑136 AACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGG < 2:21422/136‑1 GAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATG < 7:47569/136‑1 ATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATGAGCCATTGCA < 6:190436/136‑1 ATTTTTGCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATGAGCCATTGCA < 2:319027/136‑1 GCCTTATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATGAGCCATTGCAGTACG < 8:146664/135‑1 ATCTCGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGAT < 4:143084/134‑1 CGGCATGACCCCTACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGG > 5:433/1‑134 TTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > ACB143/3376475‑3376605‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACAGGGCCTGGTTGCCGAGCGCCTGCGCCAAGCCTGGGAAACGGTGGTGGCGCGCCACGACGTATTGCGCACCGGCTTCCTTTGGCAAGACCTGGATGAGCCATTGCAGTACGTGATGGGG < ACB143/4765778‑4765657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |