| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 3,360,157 | C→T | 29.8% | I138I (ATC→ATT) | CJ019_03160 → | Tn3 family transposase ISPa42 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 3,360,157 | 0 | C | T | 29.8% | 98.7 / 54.2 | 67 | I138I (ATC→ATT) | CJ019_03160 | Tn3 family transposase ISPa42 |
| Reads supporting (aligned to +/- strand): ref base C (21/26); new base T (13/7); total (34/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.42e-02 | |||||||||||
CCCTTTACCGGCACCAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTCGTGACTCGAGCGCCAA > ACB143/3360024‑3360290 | cccTTTACCGGCACCAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTaa < 4:26316/136‑1 (MQ=255)cccTTTACCGGCACCAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCaa < 6:56839/136‑1 (MQ=255) aCCGGCACCAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCAt > 8:125813/1‑136 (MQ=255) cGGCACCAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGc > 2:216478/1‑136 (MQ=255) ccAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCTGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTtgat < 6:194537/136‑1 (MQ=255) ccAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTtgat < 1:150829/136‑1 (MQ=255) cAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTtgatg > 4:81151/1‑136 (MQ=255) agcGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTg < 1:216478/136‑1 (MQ=255) tACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCa < 3:288897/136‑1 (MQ=255) tACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCa < 5:83142/136‑1 (MQ=255) tACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCa < 3:17827/136‑1 (MQ=255) tACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCa < 2:257923/136‑1 (MQ=255) ggCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCg > 7:304484/1‑136 (MQ=255) cAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTg > 4:72774/1‑136 (MQ=255) gCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAg > 1:93911/1‑136 (MQ=255) cAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAg < 5:51943/135‑1 (MQ=255) cAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAg < 7:7140/135‑1 (MQ=255) ggTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCtt > 5:289032/1‑136 (MQ=255) ggTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCtt > 6:143188/1‑136 (MQ=255) cccccTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGc > 1:30885/1‑136 (MQ=255) cccTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCt > 1:148175/1‑135 (MQ=255) cTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTAtt < 8:304484/134‑1 (MQ=255) cTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTAtt < 5:54251/134‑1 (MQ=255) cTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTAtt < 6:188886/134‑1 (MQ=255) cTACAGCAGCGACGGGCTAGAGGTCACTGAGCAGATCGCACTTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTAtt < 7:141577/134‑1 (MQ=255) aCAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGAc > 1:134737/1‑136 (MQ=255) aCAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGAc > 3:86888/1‑136 (MQ=255) cagcagCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCg < 1:259271/133‑1 (MQ=255) cagcagCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCg < 5:177345/133‑1 (MQ=255) cGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTcaa > 5:8138/1‑135 (MQ=255) cGACGGGCTA‑‑GGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTcaacaa > 7:54007/1‑136 (MQ=255) aCGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTcaacaa > 5:245929/1‑136 (MQ=255) aCGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTcaacaa > 7:138023/1‑136 (MQ=255) aCGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTcaaca > 6:167868/1‑135 (MQ=255) cGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCt > 4:80461/1‑129 (MQ=255) cGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCt < 3:80461/129‑1 (MQ=255) ggCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCt > 4:69809/1‑136 (MQ=255) gCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATGTCATTAATTCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCCACAACCACg > 3:222810/1‑133 (MQ=255) gAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCt > 6:171643/1‑136 (MQ=255) gAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGCTTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCt > 8:212809/1‑136 (MQ=255) aGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCtt < 3:72774/136‑1 (MQ=255) aGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGc < 1:49822/136‑1 (MQ=255) aGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGc < 6:216159/136‑1 (MQ=255) cGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTAAGCGTTGCTATTAGCTTACGGCTTATTCGACGATCAACAACCTAGCAGAAACCGCCTTGGCGAGt > 4:151834/1‑136 (MQ=255) gCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCg > 8:237588/1‑99 (MQ=255) gCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCg < 7:237588/99‑1 (MQ=255) aCGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGcc > 1:10080/1‑136 (MQ=255) tGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAg > 8:221887/1‑136 (MQ=255) aCTTCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGa < 2:319206/136‑1 (MQ=255) gcgcTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGt > 5:227798/1‑136 (MQ=255) cgcTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGtt < 8:54007/136‑1 (MQ=255) cgcTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTAGGCGAGTGCCCAGGAAGt < 6:292767/135‑1 (MQ=255) gcTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTa > 2:83582/1‑136 (MQ=255) gcTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTa < 8:240522/136‑1 (MQ=255) cTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGTTGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTAc < 5:147919/136‑1 (MQ=255) cTGTAGTTCTTGAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTAc < 2:42271/136‑1 (MQ=255) cTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCTGCTTATTCGACGCTCAACAACCTCGAAGAAACCGACTTGGCGAGTGACCAGTAAGTTAc < 4:90426/136‑1 (MQ=255) cTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTAc < 5:265878/136‑1 (MQ=255) aGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCtt > 1:72184/1‑135 (MQ=255) gTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCa < 5:167868/136‑1 (MQ=255) gTTCTTGAGCAGCGAGGCGATCTGATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAACCCGCCTTGGCGAGTGCCCATGAAGTTACCTTCa < 6:129142/136‑1 (MQ=255) cTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAAcc > 2:109210/1‑136 (MQ=255) gAGCAGCGAGTCGATCTCATTAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAg > 5:76576/1‑136 (MQ=255) gcagcGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTc > 1:231227/1‑136 (MQ=255) cGAGTCGATCGCATTAATGGCATGCTTGATGAGCTGATTCAGCGTTGCTATGAGCTTCCCGCTTTTTCGACGCTCAACAACCTAGCAGAAACCGCCTTGGCGAGTGCCCAGGAACGTACCTTCAACCTAGTCGTGa > 6:21353/1‑136 (MQ=255) aGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTCGTGACt > 1:173810/1‑136 (MQ=255) tCGATCTGATTAATGCCATTCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTCGTGACTCg < 6:8138/136‑1 (MQ=255) tcatcaATGCCATGCTTGAAGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTAATCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTCGTGACTCGacccc > 2:183575/1‑131 (MQ=255) atcaATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTCGTGACTCGAgcgc < 3:290484/133‑1 (MQ=255) atcaATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTCGTGACTCGAGCGCCaa < 4:86888/136‑1 (MQ=255) | CCCTTTACCGGCACCAAGCAGCGGTACGGCAGTACCTGCAGGTTACCCCCTTCTACAGCAGCGACGGGCTAGCGGTCACTGAGCAGATCGCACGTGACTGCGCTGTAGTTCTTGAGCAGCGAGTCGATCTCATCAATGCCATGCTTGATGAGCTGATTCAGCGTGGCTATGAGCTTCCGGCTTATTCGACGCTCAACAACCTCGCAGAAACCGCCTTGGCGAGTGCCCAGGAAGTTACCTTCAACCTAGTCGTGACTCGAGCGCCAA > ACB143/3360024‑3360290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |