| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 358,766 | C→T | 26.5% | intergenic (‑115/‑30) | CJ019_00331 ← / → cdhR_2 | hypothetical protein/HTH‑type transcriptional regulator CdhR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 358,766 | 0 | C | T | 26.5% | 127.9 / 49.8 | 72 | intergenic (‑115/‑30) | CJ019_00331/cdhR_2 | hypothetical protein/HTH‑type transcriptional regulator CdhR |
| Reads supporting (aligned to +/- strand): ref base C (30/22); new base T (11/8); total (41/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
GGCGGATCAAGCTGTGCATGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTTGGTGGGCAGT > ACB143/358633‑358898 | ggcggATCAAGCTGTGCATGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCg < 7:163880/136‑1 (MQ=255)ggcggATCAAGCTGTGCATGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCg > 1:53272/1‑136 (MQ=255) aaGCTGTGCATGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGAcc < 3:190183/136‑1 (MQ=255) aaGCTGTGCATGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCAAGCGACAGGAATTAGCACCGGGGCGAc > 5:164351/1‑135 (MQ=255) aTGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCg > 5:139016/1‑119 (MQ=255) aTGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCg < 6:139016/119‑1 (MQ=255) aTGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCtgt > 1:201477/1‑136 (MQ=255) aTGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCtgt < 3:290516/136‑1 (MQ=255) aTGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCtgt > 1:88741/1‑136 (MQ=255) ctctCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGgaggag > 8:69113/1‑136 (MQ=255) tcaaTCGTCAGTTCATATTGTTTTTGAGGGCTGCCTCTGCTGACCGTGTGAATACGCTACGCTTGCGTTACCTTTCCCAATCGCACGCTAGCGACAGTAATTAGAATCTGGGCGAACAGTTTCTGTGGaggagg < 4:55493/131‑1 (MQ=255) tcCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAggg > 7:83456/1‑135 (MQ=255) tcCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAggg > 3:190509/1‑135 (MQ=255) tcCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAggg > 6:253134/1‑135 (MQ=255) tcCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGaggagg < 4:317133/134‑1 (MQ=255) tcCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAggg > 2:170350/1‑135 (MQ=255) ggCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGgatgat < 2:191396/135‑1 (MQ=255) ggCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGgatgat < 2:263491/135‑1 (MQ=255) ggCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGgatgat < 2:149899/135‑1 (MQ=255) tGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGAc < 1:170350/136‑1 (MQ=255) cATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGa > 1:227596/1‑136 (MQ=255) atTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTg > 8:276710/1‑136 (MQ=255) ttGTTATTGAGGGCGGCGTCTGCGGACCGGGTGAATACGGTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTg < 2:83798/135‑1 (MQ=255) tGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTg > 8:27413/1‑136 (MQ=255) tGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTg > 3:75357/1‑136 (MQ=255) tGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGGTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTg > 4:278983/1‑136 (MQ=255) gcggcCTCTTCGGAACGTGTGAATACTCTACGCTTGGGTTTCGTTGTCCAAGCGCAGGCTAGCGACAGGTATTAGCAAGTGGGCGACAAGTTTCTGTGGAGGAGGGGATGATGGAGACTACTGACTTTCTGTTGGt < 1:60294/136‑1 (MQ=255) ggcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGGCAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGc > 4:157463/1‑136 (MQ=255) ggcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTgga > 8:57608/1‑98 (MQ=255) ggcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTgga < 7:57608/98‑1 (MQ=255) ggcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGc > 7:71256/1‑136 (MQ=255) ggcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGc > 7:58579/1‑136 (MQ=255) ggcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGc > 2:200637/1‑136 (MQ=255) ggcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGc > 5:147771/1‑136 (MQ=255) gcCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGcc < 3:180694/136‑1 (MQ=255) tGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCgg < 7:43160/134‑1 (MQ=255) tGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCgg < 6:185916/134‑1 (MQ=255) cGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCCCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCttt > 5:59425/1‑136 (MQ=255) cGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGc < 4:13661/136‑1 (MQ=255) gtgAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCAt > 4:95157/1‑136 (MQ=255) gtgAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCAt > 5:213256/1‑136 (MQ=255) tgAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATg < 5:12354/136‑1 (MQ=255) tgAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATg < 3:251051/136‑1 (MQ=255) gAATACGCTACGCTGGCGTTACCTTTCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCGTTCTGTTGGTGCCCGGCTTTTCTGCCATgg > 6:245498/1‑136 (MQ=255) gAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACTCTAGCGACAGGAATTAGCACCGGGGCGACCAGGTTCTGTGGAGGAGGGGATGATGGAGACGATAGCCTTTCTGTTGGTGCCCGGCTTTTCTGCGATgg > 2:288386/1‑136 (MQ=255) aaTACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATggg < 1:127844/136‑1 (MQ=255) gctacgctGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCa > 8:270221/1‑136 (MQ=255) tacgctGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTTGTGCCCGGCTTTTCTGCCATGGGGTTCAtt > 2:23705/1‑136 (MQ=255) ctGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCgg > 8:227239/1‑136 (MQ=255) ctGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCgg > 7:138309/1‑136 (MQ=255) ggCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCgg > 4:107473/1‑134 (MQ=255) ttGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCa > 6:31813/1‑136 (MQ=255) ttGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGGTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTGTCTGCCATGGGGGTGATTTCTGCAGTGGAGcaa > 7:109269/1‑134 (MQ=255) cAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTg < 4:222815/102‑1 (MQ=255) cAAGCGCACGCTAGCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTg > 3:222815/1‑102 (MQ=255) cAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTGAGCCATGGGGTTCATTTCGGCAGTGGAGCCACTTCg > 8:265839/1‑136 (MQ=255) cAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCACGGAATTTCAGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCg > 6:135648/1‑136 (MQ=255) cACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGc > 5:12260/1‑136 (MQ=255) cACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGc < 1:200637/136‑1 (MQ=255) tAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTg > 7:175778/1‑72 (MQ=255) tAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTg < 8:175778/72‑1 (MQ=255) gCGACAGGAATTAGCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATc < 3:107473/134‑1 (MQ=255) gCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCg < 6:213256/135‑1 (MQ=255) cGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGtt < 8:24316/136‑1 (MQ=255) ggAATTAGCTCGGGGGCGACCTGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTtggt < 7:265839/136‑1 (MQ=255) ggAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTtggt < 1:148844/136‑1 (MQ=255) aTTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTc > 4:252/1‑59 (MQ=255) aTTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTc < 3:252/59‑1 (MQ=255) aTTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTTGGTggg > 5:244047/1‑136 (MQ=255) aGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCTGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTTGGTTGGCa < 4:75357/135‑1 (MQ=255) aGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTTGGTGGGCa < 5:189951/135‑1 (MQ=255) gCATCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGCTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTTGGTGGGCAGt > 8:41197/1‑136 (MQ=255) | GGCGGATCAAGCTGTGCATGGTGGCTCTCCATCGGCAGTGCATATTGTTATTGAGGGCGGCCTCTGCGGACCGTGTGAATACGCTACGCTGGCGTTACCTTGCCCAAGCGCACGCTAGCGACAGGAATTAGCACCGGGGCGACCAGTTTCTGTGGAGGAGGGGATGATGGAGACGATTGCCTTTCTGTTGGTGCCCGGCTTTTCTGCCATGGGGTTCATTTCGGCAGTGGAGCCACTGCGGGTGGCCAATCGTTTTGGTGGGCAGT > ACB143/358633‑358898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |