Fri Jun 15 20:44:56 2018

breseq -p -j 3 --polymorphism-frequency-cutoff 0.025 -r CP009273_1.gb -o A5_F028_R2_F31_I0 A5_F028_R2_F31_I0_S2186_L001_R1_001.good.fq.gz A5_F028_R2_F31_I0_S2186_L001_R2_001.good.fq.gz