Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC | CP009273 | 2,656,840:1 | (GCGCGCA)2→3 | 81.2% | coding (40/804 nt) | suhB → | inositol monophosphatase |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 2656826 | 3 (0.140) | 15 (0.670) +GCGCGCA |
16/228 | NT | 81.2% | coding (26/804 nt) | suhB | inositol monophosphatase |
? | CP009273 | 2656827 = | 4 (0.170) | coding (27/804 nt) | suhB | inositol monophosphatase |
TTTCTTCATCTAAAGATTATTCACGCATCTTATCATAAAACGAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACCCCGGACGCTGTAGAAGCGAGCCAGAAAGGCAGTAAC‑GATTTCGTGACCAACGTAGATAAAGCTGCCGAAGCGGTGATTATCGACACGATTCGTAA > CP009273/2656687‑2656970 | tttcttCATCTAAAGATTATTCAGGCATGTTATCGTAAAACGAAGACAGATGCAGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagc > 2:239432‑M1/1‑140 (MQ=255) gATTATTCACGCATCTTATCATAAAACGAAGACAGATGCGGATCTCGCTGCTATACTCTGCGCCGTTTTCCTGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑TCATCGCCGTGCGCGCAGCGCGCAAgg > 1:102379/1‑143 (MQ=255) gATTATTCACGCATCTTATCAGAAAACGAAGACAGATGCCGATCTCGCTGCGATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTGCGCGCAGCGCGCAAGGCGGGta < 2:120146/149‑1 (MQ=255) attCACGCATCTTATCATAAAACGAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGCTGATGACACACCG‑GGTgcgcgcagcgcgcagcgcgcaaggcgg < 2:212039‑M1/149‑28 (MQ=255) aTAAAACGAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaagccgggaaatttcaatgccaa > 2:110710‑M1/1‑106 (MQ=255) aTAAAACGAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGGTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggaactttacttgacaa > 2:301344‑M1/1‑106 (MQ=255) tAAAACGAAGACAGATGCCGATCTCGCTGCTATACTTTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaatt < 1:309513‑M1/143‑39 (MQ=255) aaaaCGAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattg > 1:46742‑M1/1‑104 (MQ=255) gAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgagcagcgccccaggcgggtcatttcattgcccaa > 1:180550‑M1/1‑99 (MQ=255) tGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaa < 1:123134‑M1/143‑54 (MQ=255) gCCGATCTCGCTGCTATACTCTGCGCCGTTTACCCGTTCTTTAACATCCAGTGAGCGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcggagcgcgcagcgcgcaaggcgggtaagttaattgccaaaaaacttgtaa > 1:55445‑M1/1‑89 (MQ=255) tctcGCTGCTATACCCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgct < 2:29685‑M1/149‑66 (MQ=255) aCTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaa < 1:84221‑M1/143‑72 (MQ=255) aCTCTGCGCCGTTTTCCCGTTCTTTAACAGCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaa < 1:125935‑M1/143‑72 (MQ=255) cGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGCAACCCCGGACGCTGTAGAAGCGAGCCAGCAAGGCAGTAAC‑GATTTCGTg > 2:285115/1‑149 (MQ=255) agagggaCCGATGCATCCGAGGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaatggccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgatttcgtgaccaacgtagat < 2:60246‑M1/149‑114 (MQ=255) agagagaCCGATGCATCCGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgatttcgtgaccaacgtagat > 2:32746‑M1/1‑36 (MQ=255) aTCCGAGGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgatttcgtgaccaacgtagataaagctgccgaagc < 2:53174‑M1/149‑128 (MQ=255) cGATGCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgatttcgtgaccaacgtagataaagctgccgaagcggt > 2:202348‑M1/1‑19 (MQ=255) gCTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgatttcgtgaccaacgtagataaagctgccgaagcggtgatt > 2:197622‑M1/1‑15 (MQ=255) cTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgatttcgtgacccacgtcgatacagctgccgaagcggtgatta > 2:30291‑M1/1‑14 (MQ=255) cTGA‑ACATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgaattcgtgaccaacgtagataaagctgccgagtggg > 1:241873‑M1/1‑14 (MQ=255) tGA‑ACATCGCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACCCCGGACGCTGTAGAAGCGAGCCAGAAAGGCAGTAAC‑GATTTCGTGACCAACGTAGATAAAGCTGCCGCAGCGGTGATTATc > 1:50099/1‑143 (MQ=255) a‑aCATCGCCGTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagtcagaaaggcagtaacgatttcgtggccaacgtagataaagctgccgaagcggtgattatcg > 2:196584‑M1/1‑11 (MQ=255) gCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACCCCGGACGCTGTAGAAGCGAGCCAGAAAGGCAGTAAC‑GATTTCGTGACCAACGTAGATAAAGCTGCCGAAGCGGTGATTATCGACACGATTCGTaa > 2:375613/1‑149 (MQ=255) cGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACACCGGCCGACGTAGAAGCGAGCCAGAAAGGAAGCAACGGGCGGCCTG‑CCGACGTAAACAAATCGGCCGAAGCGGTGATTATCGACACGAtcc > 1:374330/1‑141 (MQ=255) gTgcgcgcagcgcgcagcgcgcaaggcgggtaatttaattgccaaaaactatgaaaccccggacgctgtagaagcgagccagaaaggcagtaacgatttcgtgaccaacgtagataaagctgccgaagcggtgattatcgaca > 1:268160‑M1/1‑2 (MQ=255) | TTTCTTCATCTAAAGATTATTCACGCATCTTATCATAAAACGAAGACAGATGCCGATCTCGCTGCTATACTCTGCGCCGTTTTCCCGTTCTTTAACATCCAGTGAGAGAGACCGATGCATCCGATGCTGA‑ACATCGCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACCCCGGACGCTGTAGAAGCGAGCCAGAAAGGCAGTAAC‑GATTTCGTGACCAACGTAGATAAAGCTGCCGAAGCGGTGATTATCGACACGATTCGTAA > CP009273/2656687‑2656970 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |