Fri Jun 15 17:51:14 2018

breseq -p -j 3 --polymorphism-frequency-cutoff 0.025 -r CP009273_1.gb -o A3_F026_R1_F21_I0 A3_F026_R1_F21_I0_S2181_L001_R2_001.good.fq.gz A3_F026_R1_F21_I0_S2181_L001_R1_001.good.fq.gz