| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 3,178,254 | IS5 (+) +4 bp | 40.0% | coding (56‑59/291 nt) | yqiC → | BMFP family putative fusogenic protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 9 (0.340) | 9/274 | NT | 42.1% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 3178254 = | 12 (0.470) | coding (56/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 7 (0.260) | 7/276 | NT | 36.2% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 3178257 | 12 (0.460) | coding (59/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCT > CP009273/3178106‑3178401 | gcagcaACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCCGGTTCACGAATCAATGcc > 1:396263/1‑149 (MQ=255) ttCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGa < 1:246189/149‑1 (MQ=255) atggcgaagaaaagggctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCgggg < 1:393885‑M2/24‑1 (MQ=255) tCTGGTTGATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAACCTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTCCACGAATCAATGCCTCACGGAATCAGGGAGTTCGGGGaa < 2:379527/149‑1 (MQ=255) ctgtgctatcactTACCCTTATCGCACTACAATGGCACTCATCACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctga > 1:97900‑M2/7‑126 (MQ=255) cTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGCATCAATGACTAAGGGGATCAGGGAGTTAGGGGAAg > 1:200523/1‑149 (MQ=255) ggTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgata < 1:158771‑M2/149‑26 (MQ=255) ttACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACCGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTCCACGAATCAATGCCTAAAGGAATCAGGGAGATCGGGGAAGACGACGAGaaaa > 2:326535/1‑149 (MQ=255) ttATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATcc > 1:368703/1‑149 (MQ=255) agccccTCAAAACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACaa < 2:456222/144‑1 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAg < 1:427131‑M2/60‑1 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAgc > 1:159319‑M2/89‑149 (MQ=255) ttacgggagaaaaagtcggttcaaacatgaggaaaggtaatgactgagtcagccgagaagattttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAgcgc < 2:287074‑M2/63‑1 (MQ=255) cAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:419175‑M2/1‑87 (MQ=255) acacCTAGCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAACAAAATCCGCCAAACCCTACAAGCGCAGCTg < 1:241302/149‑1 (MQ=255) ccTATCAGCACAGGGAAACTACAAAGAAAAAAACA‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGAcg < 2:169066/149‑1 (MQ=255) aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGcc > 2:269535‑M2/75‑149 (MQ=255) aCAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca > 1:68787‑M2/1‑73 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGt > 2:304674‑M2/65‑149 (MQ=255) aaaCTACAATGATTGACCCG‑AAACAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCATAAggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact < 1:245800‑M2/149‑83 (MQ=255) aagagaggaattgactgagtcagcctagaagaattcccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGt < 1:240229‑M2/92‑1 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAGGCCGTGa > 2:433218‑M2/56‑149 (MQ=255) gATTGACCCGAAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGAGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGATGCGCCTCGACCTTGTAAGCCGTGaa > 1:283428/1‑149 (MQ=255) aTTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAaga < 1:27818/149‑1 (MQ=255) ccG‑AAAAATATTGAGCAAGCCGCTCGCCAGGTTCACGAATCAATGCCTAAggaacgtgcaaataattccctgatctcagatcatggttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcccgcagtg < 1:343355‑M2/149‑100 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccATAAAGGAATCAGGGCGTACGGGGAAGATGTGGAGACAAAACTCCACCAAACCCTACAAGCGCCACTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGttccacgccaacg > 2:14474‑M2/39‑143 (MQ=255) aTTGAGCAAATCGCTCGGCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAAc > 2:113437/1‑149 (MQ=255) cgcCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGTCGTCCAAACGCAAGTCCTGTTACg < 1:347756/149‑1 (MQ=255) gTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa < 1:466689‑M2/149‑130 (MQ=255) tagcgtcccctaaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagtcatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat > 2:406388‑M2/9‑13 (MQ=255) ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggtccatcatgggtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt < 1:205119‑M2/149‑145 (MQ=255) cCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCt > 1:327886‑M2/2‑149 (MQ=255) | GCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCG‑AAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCT > CP009273/3178106‑3178401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |