| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009273 | 4,145,501 | Δ320 bp | coding (573‑892/1005 nt) | argC → | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009273 | 4145501 | 4145820 | 320 | 61 [0] | [0] 61 | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4145500 | 0 (0.000) | 57 (1.090) | 45/278 | 0.2 | 100% | coding (572/1005 nt) | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding |
| ? | CP009273 | 4145821 = | 0 (0.000) | coding (893/1005 nt) | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding | |||||
AAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGTAAAGCGGCCATTTCAAACAGCTTTTGTGAAGTTAGCCTGCAACCGTATGGCGTCTTTACTCATCGCCATCAACCAGAGATCGCCACACACCTCGGTGCTGACGTTATCTTCACCCCACATCTGGGCAATTTCCCGCGCGGCATTCT > CP009273/4145352‑4145647 | aaaTTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACTAGCGGGGTGAGCGGTGCAGGGCG > 1:904142‑M1/1‑149 (MQ=255) aaTTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGa < 1:870824‑M1/149‑2 (MQ=255) ttAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGGTGTCTACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagc > 1:630208‑M1/1‑146 (MQ=255) tAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagca > 1:129003‑M1/1‑145 (MQ=255) agaagCGGATTGGAGGGCGGGGCCGGGGTGGTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAAGCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagc < 2:797298‑M1/144‑4 (MQ=255) cGAATTTGATTGCGGTGCCGGGCTGTTACCAGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattat < 1:863528‑M1/149‑14 (MQ=255) tttGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtg < 1:539012‑M1/149‑18 (MQ=255) tttGATTCCGGTGCCGGGCTGTTATCCGACGGTGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtg < 1:474031‑M1/149‑18 (MQ=255) gATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgcttattg < 2:542065‑M1/144‑16 (MQ=255) ttGCGGTGCCAGGCTGTAAACCGAAAGCGGAACAGCTGGAGCTAAAACCATTGATTGATGCCGATCTTCTTGACCTCACTCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCTGTGCAGGGCGagcatctgattattgtggcgac < 1:886973‑M1/149‑23 (MQ=255) gCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccg < 2:314064‑M1/144‑25 (MQ=255) tcgGGCTGTTATCGGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagaca < 1:53500‑M1/148‑31 (MQ=255) ggCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaact < 1:128456‑M1/149‑34 (MQ=255) ggCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaaga < 2:315023‑M1/144‑29 (MQ=255) gCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagac < 2:263625‑M1/144‑30 (MQ=255) cTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGCCCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaaatta > 1:243885‑M1/1‑114 (MQ=255) tGTTATCCGACGGCGGCACAGCTGGCGCGGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCCACGCAACGAGCGGCATGCATGATCCAGGGCGagcatctgattattgtgtcgaccgaagacaacttac < 1:681010‑M1/149‑37 (MQ=255) tCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcgtctgagtattgtggcgaccgaaggcaacttac > 2:403826‑M1/1‑108 (MQ=255) cgggcccgcgggcgctgaaaccGTTGATTGATGCCGATCTCCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCACCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggc < 1:67874‑M1/139‑50 (MQ=255) gcACAGCTGGCGCTGAAACCGTTGAATGATACCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCCACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcgg > 1:481619‑M1/1‑98 (MQ=255) cacaGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggc > 1:927018‑M1/1‑97 (MQ=255) caGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCCGTGGCCGGTGATCAACGCTACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggc > 2:820076‑M1/1‑95 (MQ=255) aGCTGGCGCTGAAACCGTGGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcg < 2:793425‑M1/144‑51 (MQ=255) cTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggc > 2:212597‑M1/1‑92 (MQ=255) tGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagc > 1:232664‑M1/1‑91 (MQ=255) cTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgcaaggggcggcggcccaagc > 2:207386‑M1/1‑86 (MQ=255) tGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCCGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcg < 2:840553‑M1/144‑60 (MQ=255) tGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagaaagtttttttgttggcgcggcggcacaagcggtaca < 1:225307‑M1/149‑65 (MQ=255) tGAAACCGTTGATCGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtaca < 1:268003‑M1/149‑65 (MQ=255) cgaAACCGCTGATTGATGCCTATCTTCTCGCCCTCAATCAGTGGCCGGTGACCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgcacggtctcaaccgactgaaaggcgcggcggcacaagcggtaca < 1:224156‑M1/148‑65 (MQ=255) aCCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgc > 1:462053‑M1/1‑81 (MQ=255) tgatGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatatt > 1:925896‑M1/1‑72 (MQ=255) tgatGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatatt > 1:608869‑M1/1‑72 (MQ=255) tcttGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcg < 2:418872‑M1/144‑85 (MQ=255) tgactcctatcagtggcCGGTGATCAACCCCACCACGGGCGTGGGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggct < 2:124483‑M1/136‑88 (MQ=255) ccTCCATCAGGGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgatcattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatg < 2:113610‑M1/144‑91 (MQ=255) cTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaacgaagacaacttactgaaaggcgcggcggcaccagcggtgcagtgcgccaatatggcttgcggctatgg > 2:32895‑M1/1‑53 (MQ=255) tCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaac > 1:603677‑M1/1‑52 (MQ=255) tCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggagcggcggcacaaccggtacagccggccagtccccgtgtcggctatgcggggag > 1:398019‑M1/1‑52 (MQ=255) ccagtcggggtccggtgatcaacgCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttaccgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcg < 2:537209‑M1/133‑93 (MQ=255) cAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcgg < 2:472433‑M1/144‑94 (MQ=255) tGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacgtagtgaagggcaggacggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgccgtctc > 1:445666‑M1/1‑44 (MQ=255) ccGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctctta > 1:537443‑M1/1‑41 (MQ=255) cGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaacatgcggttcggctatgcggaaactcagtcg > 2:472095‑M1/1‑40 (MQ=255) gATCAAGGCGACCAGCGGGGTGAGCGGTGCGGGGCGagcgtctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctctta < 2:56506‑M1/144‑109 (MQ=255) aTCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcaccactccgc < 2:46886‑M1/144‑110 (MQ=255) tCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagg > 1:855183‑M1/1‑34 (MQ=255) tCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgaggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagg > 1:663489‑M1/1‑34 (MQ=255) aaCGCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgacaatactcggttcggctatgcggaaacgcagcctcctactga > 2:506430‑M1/1‑32 (MQ=255) aaCGCCACCAGCGGCGTGAGCGGTGAAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgttgcggctctgcggaaccgcagccccttctttaagggt > 1:554164‑M1/1‑32 (MQ=255) gCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacacgcggtgcagtgcgccaatattcgtttcggctatgaggaaaagcagtctcttatttaagggggca > 1:13679‑M1/1‑29 (MQ=255) gCCACCAGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagggtgga > 1:273686‑M1/1‑29 (MQ=255) ccaccaGCGGCGTGAGCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagggtgcaa > 1:802408‑M1/1‑28 (MQ=255) tGAGCGGTTCAGGGCGaggatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagggtgcaatgatgaatccat < 1:59077‑M1/149‑134 (MQ=255) gCGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatcttcgtttcggctatgcggaaacgcagtctcttatttaagggtgcaatgatgaatccattaa < 1:872792‑M1/149‑137 (MQ=255) cGGTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagggtgcaatgatgaatacc > 2:368220‑M1/1‑12 (MQ=255) ggTGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagggtgcaatgatgaatccat < 2:521307‑M1/144‑134 (MQ=255) tGCAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggcaacgcagtctcttatttaagggtgcaatgatgaatccattaagtat > 1:767613‑M1/1‑9 (MQ=255) cAGGGCGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagggtgcaatgatgaatccattaattatca > 1:529659‑M1/1‑7 (MQ=255) ggCGggcatctgattattgtggcgaccgaagacaatttacagaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcggctatgcggaaacgcagtctcttatttaagggtgcaatgatgaatccattaattat < 2:88714‑M1/144‑141 (MQ=255) cGagcatctgattattgtggcgaccgaagacaacttactgaaaggcgcggcggcacaagcggtacagtgcgccaatattcgtttcgtctatgcggaaacgcagtctcttatttaagggtgcaatgatgaatcccttaattatcaaactg > 1:627512‑M1/1‑2 (MQ=255) | AAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGTAAAGCGGCCATTTCAAACAGCTTTTGTGAAGTTAGCCTGCAACCGTATGGCGTCTTTACTCATCGCCATCAACCAGAGATCGCCACACACCTCGGTGCTGACGTTATCTTCACCCCACATCTGGGCAATTTCCCGCGCGGCATTCT > CP009273/4145352‑4145647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |