New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4158301	76 (0.650)	8 (0.120) +AGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAA	3/160	12.2	14.2%	noncoding (2/76 nt)	gltT	tRNA‑Glu
	?	CP009273	= 4199681	101 (0.860)					intergenic (+65/‑21)	rrsE/gltV	16S ribosomal RNA of rrnE operon/tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTT  >  CP009273/4158154‑4158449                                                                                                                                                    |                                                                                                                                                     cTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTc                                                                                                                                                     >  2:1678278/1‑149 (MQ=39) cTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTAGCGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTCCTGGCGGTACATCTGGCACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTc                                                                                                                                                     >  2:558280/1‑149 (MQ=14)  tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTcc                                                                                                                                                    >  2:1944371/1‑149 (MQ=39)   cacacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTccc                                                                                                                                                   <  2:505321/149‑1 (MQ=37)    acacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTcccc                                                                                                                                                  >  2:1320044/1‑149 (MQ=39)     cacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCgtgt                                                                                                                                                      >  1:1492834/1‑144 (MQ=39)      acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTc                                                                                                                                                     >  1:1149970/1‑144 (MQ=39)      acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTc                                                                                                                                                     >  1:214088/1‑144 (MQ=39)      acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCtt                                                                                                                                                >  2:1783543/1‑149 (MQ=39)      acaGATTGTCTGATAGAAAGTGAAAAGCAAAGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTGCGCTTTCTATGAATGAAAGCTCACCCTGCACGAGAATATCACGCAACGCGTGATAAGCAGTTTTCGTGTCCCCtt                                                                                                                                                >  2:1597959/1‑149 (MQ=11)       caGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTc                                                                                                                                               <  2:1457027/149‑1 (MQ=38)        aGATTGTCTGAGAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTccc                                                                                                                                                   <  1:746806/144‑1 (MQ=38)          aTTGTCTGATGGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCt                                                                                                                                                 <  1:997277/144‑1 (MQ=17)          aTTGTCTGATAGAAATGGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCTCCCTACACGAAAATATCTTGCAACGCGTGATAAGCAATTTTCGTGTCCCCt                                                                                                                                                 <  1:839707/144‑1 (MQ=11)             gTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTag                                                                                                                                         <  2:610725/149‑1 (MQ=37)             gTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTag                                                                                                                                         <  2:1234971/149‑1 (MQ=37)              tCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGt                                                                                                                                             >  1:640961/1‑144 (MQ=39)               cTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTagag                                                                                                                                       <  2:20538/149‑1 (MQ=37)                 gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGc                                                                                                                                     >  2:829373/1‑149 (MQ=37)                 gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGc                                                                                                                                     <  2:1695244/149‑1 (MQ=35)                  aTAGAAAGTGAAAAGCAAGGCGTTTACGCATTGGGAGCGAGGCTGAAGAGAATAAGGCCGTTCACTTTCTATTAATGAAAGCTCACCCGACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGcc                                                                                                                                    >  2:1287854/1‑149 (MQ=255)                   tAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                                        <  1:1365966/144‑1 (MQ=34)                   tAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                                        <  1:10054/144‑1 (MQ=34)                    aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTcgag                                                                                                                                       >  1:1649006/1‑144 (MQ=21)                    aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                                                  <  2:1478929/149‑1 (MQ=33)                    aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTCCGCTGTCTATAAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGAGAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                                                  <  2:1753425/149‑1 (MQ=255)                     gAAATTGAAAAGCAAGGCGTTGACGCGTTGGGAGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                                                      <  1:1845388/144‑1 (MQ=12)                      aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAgg                                                                                                                                >  2:1876392/1‑149 (MQ=32)                        aGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGccc                                                                                                                                   <  1:1531252/144‑1 (MQ=32)                          tGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                                                 >  1:377656/1‑144 (MQ=32)                          tGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGACAAGCAATTTTCGTGTCCCCTTCGCCTAGAGGCCCAAGacac                                                                                                                            >  2:1829103/1‑149 (MQ=12)                          tGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGACCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCCCGCCACGCGTGATAAGCAGTGTTCGTGTCCCCTTCGTCTACAGGCCCAg                                                                                                                                 >  1:1561609/1‑144 (MQ=11)                           gAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAgg                                                                                                                                >  1:1011734/1‑144 (MQ=32)                            aaaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGa                                                                                                                               <  1:1434285/144‑1 (MQ=32)                            aaaaGCAAGCCGTTTACGCTTTTGGAGTGAGGCAGAAGACAACAACCCCGATCGCCTCCCATTAATAAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGa                                                                                                                               <  1:783420/144‑1 (MQ=11)                                                tttggAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGt                                                                                                           <  1:381917/141‑1 (MQ=1)                                                   ggggTGAGGCTCAAGAGAATATGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAACATCACGCAACGCGTGATCAGCTTTTTGCGGGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAAc                                                                                                        <  1:89394/141‑1 (MQ=1)                                                                                                           acacGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCtt                                           <  2:666347/149‑1 (MQ=11)                                                                                                           acacGAAAATAGCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGTTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCtt                                           <  2:666437/149‑1 (MQ=11)                                                                                                            cacGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTCTCAGGGGTTCGAATCCCCTAGGGGCCGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTa                                          >  2:467483/1‑149 (MQ=9)                                                                                                                 aaaTATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTa                                          >  1:845568/1‑144 (MQ=31)                                                                                                                    tatCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCa                                  <  2:1612863/149‑1 (MQ=32)                                                                                                                     atCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAatat                                      >  1:616389/1‑144 (MQ=32)                                                                                                                     atCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaa                                 >  2:259112/1‑149 (MQ=32)                                                                                                                       cACGCAACGCGTGATAAGCAATTGTCGTGGCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                               <  2:425641/149‑1 (MQ=17)                                                                                                                        acgcgttgcgTGATAAGCAATTTTCGTGTCCCCTACGACTAGGGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCCAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCCCCGACCTTACTAtctc                                   >  1:16899/8‑144 (MQ=11)                                                                                                                        aCGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAAc                              <  2:1907638/149‑1 (MQ=32)                                                                                                                         cGCAACGCGTGATAAGCAATTTTCGCGTCCCCTTCGTCTAGAGGACCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCGCTTGCTGGTTTGTGAGTGAAAGTCGCCGACCGTGATAGCTCAAAAcg                             >  2:994402/1‑148 (MQ=11)                                                                                                                           cAACGCGTGATAAGCAATTTTCGTGGCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCa                           <  2:233607/149‑1 (MQ=25)                                                                                                                            aaCGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCAt                          >  2:1484315/1‑149 (MQ=35)                                                                                                                              cgcgTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGCGAGTGAAAGTCGCCGACCTTAATATCTCAAAACt                             >  1:1598928/1‑144 (MQ=18)                                                                                                                               gcgTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCtt                       >  2:711470/1‑149 (MQ=38)                                                                                                                                cgTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGCGAAAGTCGCCGACCTTAATATCTCAAAAcaga                           <  1:942845/144‑4 (MQ=1)                                                                                                                                 gtgtTAAGCAATTTTCGTGTCCCCTTCGTCCAGTGGTCCACGACACCGTCCTTTCAGGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCAt                          <  1:427384/144‑1 (MQ=11)                                                                                                                                  tGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACGGGGGTTCGAATCCCCTAGGGGACGCCCCTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAGTATCTCAAAACTCATc                         >  1:360720/1‑144 (MQ=255)                                                                                                                                  tGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCgg                    <  2:1277130/149‑1 (MQ=40)                                                                                                                                   gATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCggg                   >  2:1450203/1‑149 (MQ=255)                                                                                                                                   gATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCggg                   >  2:1674332/1‑149 (MQ=40)                                                                                                                                   gATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCggg                   >  2:1099555/1‑149 (MQ=40)                                                                                                                                      aaGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGa                <  2:409670/149‑1 (MQ=255)                                                                                                                                       aGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCgg                    <  1:1071774/144‑1 (MQ=40)                                                                                                                                       aGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCAGCTTCGGGTGAt               >  2:968287/1‑149 (MQ=255)                                                                                                                                       aGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCACTAGGGGACGCCCCTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCgg                    >  1:1543735/1‑144 (MQ=255)                                                                                                                                       aGCAATTGTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGACTCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCgg                    <  1:1656176/144‑1 (MQ=255)                                                                                                                                         cAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACATGTGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTAAAAACTCATCTTCGGGt                  >  1:1107916/1‑144 (MQ=255)                                                                                                                                          aaTTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCC‑TTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt           >  2:844432/1‑149 (MQ=255)                                                                                                                                           aatttCGTGTCCCCTGCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt           <  2:853212/147‑1 (MQ=255)                                                                                                                                            ttttCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTGGCCGACCTTAATATCTCAAAACACATCTTCGGGTGAt               >  1:2335/1‑144 (MQ=255)                                                                                                                                             tttCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTga         <  2:1109798/149‑1 (MQ=255)                                                                                                                                               tCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCACCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGGCGCCACTTGCTTGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGtt            >  1:1480433/1‑144 (MQ=255)                                                                                                                                                  tgtCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGGCGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAGAACTCATCTGAGGGTGGTGttgta         >  1:539241/1‑141 (MQ=11)                                                                                                                                                  tgtCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGCCGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGatat    >  2:1425543/1‑149 (MQ=255)                                                                                                                                                  tgtCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTgc         >  1:894216/1‑143 (MQ=38)                                                                                                                                                  tgtCCCCTTCGGCCAGAGGCCCAGGACACCGCGCTTGCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTga         <  1:1478486/144‑1 (MQ=255)                                                                                                                                                  tgtCCCCTGCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACCGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTga         <  1:1444286/144‑1 (MQ=255)                                                                                                                                                  ggtCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTga         <  1:276384/143‑1 (MQ=39)                                                                                                                                                    tCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATAttt  >  2:1240303/1‑149 (MQ=38)                                                                                                                                                    |                                                                                                                                                     CTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTT  >  CP009273/4158154‑4158449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.