| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1092417 = | 138 (1.170) | 10 (0.130) +GGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCGACAGCCAGTT |
6/198 | 12.0 | 10.7% | intergenic (+132/+604) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | CP009273 | 1092518 = | 108 (0.920) | intergenic (+233/+503) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 108 total aligned reads displayed.
TTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT > CP009273/1092370‑1092665 | ttGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTTTGGTCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg > 2:1547890/1‑149 (MQ=255) gATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg < 2:717189/149‑1 (MQ=255) tgCAGGATTTCCCCGCGCGCTAGCAGACGTGGGCGGGGGCACCGGGTGTGCGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGAGCCTATTGGGTGATTGACTCGCTTCGCTCGCCCTGCgg < 1:835697/144‑1 (MQ=17) tgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCgg > 1:1224218/1‑144 (MQ=255) tgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGc > 2:332137/1‑149 (MQ=255) tgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGc > 2:1673329/1‑149 (MQ=255) gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg < 1:671713/144‑1 (MQ=255) gCACGACTTCCGCCCGCCCCAACAGACGGCGTCGCGGGCACCCGGTGTGTGCAATACACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCggg < 1:690582/144‑1 (MQ=14) attctttttCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGcc < 2:449224/143‑1 (MQ=255) cACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc > 2:210350/1‑149 (MQ=255) aCGGTTTCCCGTCGCCCCAGTAGACCTGGGCGGGGGCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCa < 1:1752786/144‑1 (MQ=14) aCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGGGCTCTTCTTTAATTGTGGGGGTGTGGGGGGGGGTGAGTGGCTTCGCTGGGTTTGCGGGct > 1:1485935/1‑143 (MQ=18) aCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCACCCGCACAGCggcga > 1:1202176/1‑141 (MQ=18) aCGATTCCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCg < 2:87772/149‑1 (MQ=255) ttCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCAc < 2:965099/149‑1 (MQ=255) ccccTCGCCCTAACAGACGTGGGCGGGGGCAGCGGGTGTGTGCAATATACGAAAG‑AAAGGCCCGGACTTACGTACGAGCCCTTCGGTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCt > 1:367667/1‑144 (MQ=17) cTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGt > 2:934720/1‑149 (MQ=255) cTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTAGCCCTGCGGCAGGCCCGCACACTGCgg > 2:687503/1‑148 (MQ=17) gCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa < 2:866576/149‑1 (MQ=255) gCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa < 2:1312295/149‑1 (MQ=255) cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCAc < 2:1687903/149‑1 (MQ=255) ccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTGAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACg < 2:936776/149‑1 (MQ=255) ccTAACAGACGTGGGCGGGGGCACCCGGTGAGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAATCACGTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGGTCACg > 2:1038748/1‑149 (MQ=17) tAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGt < 2:1170599/149‑1 (MQ=255) aCAGACGTGGGCGGGGGCACCCGGTGTGTGGAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt < 2:458419/149‑1 (MQ=255) aGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAGA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACCGCGTTCACggcccgt > 2:925265/1‑144 (MQ=255) aGACGTGGGCCGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGt < 2:1384305/149‑1 (MQ=255) gACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTCAAATACGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTc < 2:631162/149‑1 (MQ=255) cGTGGGGGGGGGCACCCGGTGGGTCGAATATACGAAAA‑AAAAGCCCGTACTTGCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCt < 1:148210/144‑1 (MQ=11) gggCGGGGGCACCCGGTGTGTGCAATATACGAAAAGAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGATTCGCTTCGTTCGCCCTTCGGGCAGCCCGCTCACTGCGTTCCCGGTCttt > 1:1090678/1‑142 (MQ=11) ggCGGGGGCACCCGGTGTGGGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTAACGGTCTTTcc < 1:917135/144‑1 (MQ=255) gCGGGGGCACCCGGCGTGGGCAAAATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg < 2:180308/149‑1 (MQ=255) gggCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg < 1:1303478/144‑1 (MQ=33) ggCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg < 1:250171/144‑1 (MQ=32) ggCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg < 1:680914/144‑1 (MQ=32) ggCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTc < 2:566539/149‑1 (MQ=32) gCACCCGGTGTTGGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc < 1:373782/144‑1 (MQ=17) gCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc < 1:847831/144‑1 (MQ=32) tgCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAc > 2:1154442/1‑149 (MQ=11) cAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCCACTGGCTGTCGCCCGTTGTCGAccc > 2:818448/1‑149 (MQ=17) cAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGGCTGTCCAACTGGCTGTCGCCAGTTGTCGAccc > 2:1258106/1‑149 (MQ=17) aaTATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCCGTTGTCGAcccc > 2:1240187/1‑149 (MQ=17) atatACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAccccc < 2:1296085/149‑1 (MQ=32) taCGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAccc < 1:627719/144‑1 (MQ=32) gAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAACTCAGGCGCTGAGAGCGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgg < 2:653068/149‑1 (MQ=11) gAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCg < 1:168247/144‑1 (MQ=32) gAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgg < 2:165994/149‑1 (MQ=32) gAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgg > 2:214403/1‑149 (MQ=32) aaaa‑aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCCGTCGCCAGTCCTCGCCCCCcgggcggg > 2:934419/1‑149 (MQ=11) aaa‑aagaGCCCGTCCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGCGGGGATTGACTCGCTTCGCTCGCCCCGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgggg < 2:1425786/149‑1 (MQ=255) aa‑aaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGc < 2:359518/149‑1 (MQ=32) aaaaGCCCGTACTTGCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCgg < 1:40097/144‑1 (MQ=17) gTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTtctc < 1:240805/144‑1 (MQ=32) gTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCACTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGGGGGGGCTtctc > 1:1803327/1‑144 (MQ=12) tACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATcccc < 2:658088/149‑1 (MQ=32) aCGAGCTCTTCTTTAAATATTGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGgtgtgt < 2:218132/149‑1 (MQ=17) aCGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCtgatcggccgcgcgg > 1:1313129/1‑130 (MQ=255) caaGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACGGCGTTCACGGTCTGTCCAACTGGCTGTCGCAAGTTGGCGACCCCAGGTCGGGGCTTCGCATCCCCCCGGtgtgtg < 2:399214/147‑1 (MQ=11) gAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCCTCTCATCCCCCCGGTGTGTGc > 2:1563709/1‑149 (MQ=17) gCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGCCACCTCTTGTGGGCCCCCGGTCGGGGCATCGCGTCCCCCCgggggt > 1:1406496/1‑140 (MQ=11) gCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTCGCTGGCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCaa < 2:1548434/149‑1 (MQ=17) ctctTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGgtgtgt < 1:727785/144‑1 (MQ=32) tcttctTTAATTTTGGCGGGGAGGGGGGGATTGACTCGCTGCGCCCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACTGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGtgtgtg < 1:1398890/144‑1 (MQ=11) tcttctTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTCTGTGCAATa > 2:163252/1‑149 (MQ=17) ttcttTAAATATGGCGGTGAGGGGGGGATTGACTCGCCTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCa < 1:564710/144‑1 (MQ=17) tcttTAAATAGGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATacac < 2:1313919/149‑1 (MQ=25) tttAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCCGCCGGCCGCCCGCTCCCTGCGTTCGCGCTCTGTCCCCCTGCCCGTCGCCCGTTCGCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATa < 1:1479839/144‑1 (MQ=11) ttAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATTCCCACGCTGTGGGCGATACACGaa > 2:39622/1‑149 (MQ=11) ttAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACGCGaa > 2:39594/1‑149 (MQ=21) taactgggggggTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCTACCGGCTGTCGCCAGTTGTCGACCCTCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATaca < 1:522824/134‑1 (MQ=11) tAATTAGGGCGGGGGGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATaca < 1:911664/144‑1 (MQ=255) aaTATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGACCTGCGGGCAGCCGGCTAGCTGGTTGCACGGTCTGTCCAACTGGCTGGCGCCAGTTGTCGACCCCCGGTCGGGGCGTCTGATCCCCCCGGTGTCTGCagtgtcagaaaaa > 2:285349/1‑137 (MQ=11) aaTAGGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACg < 1:306138/144‑1 (MQ=25) tatGGCGTGGAGGGGGGGATTGCCTCGCTTCGCCCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGCCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaaaaaa < 2:1165491/149‑1 (MQ=11) atGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCATGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaa > 1:1302520/1‑144 (MQ=21) tGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGGTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATAAACGAAAAAAAAg > 2:553806/1‑149 (MQ=17) tGAGGGGGGGATTGCCTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACGGGCTGCCGCTAGTTGTCGACCCCGGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACAAGAAAAAAAAGc < 1:1474086/144‑1 (MQ=11) aGGGGGGGATTGACTCGCGTCCCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCGTCTCAGCCCCCCGGTGTGTGCAATACACGAAAAAAAAGccc < 1:26102/144‑1 (MQ=255) gATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAGGCCCGGACTTTcctcc > 2:112342/1‑145 (MQ=255) tGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACGGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGGGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAg < 2:320321/149‑1 (MQ=25) tGACTCGCTTCGCCCGCCCCGCGGGCATCCCGCTCACTGCGTACACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGt < 1:23492/144‑1 (MQ=255) gcaatcgcttcgctCGCTCTGCGGGCAGCCCGCTCACTGCGTGCACGGTCTGCCCAACTGGCGGTCGCCAGTTGTCGCCCCCCGGTCGGGGCTTCTCTTCCCCCCTGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAg < 2:287558/145‑1 (MQ=11) aCTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTCCTTTCGTAAGAGcg > 2:866640/1‑148 (MQ=25) aCTCGCTTCGCTCGCCCTGCGGGCAGCCCACTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAGTACACGAACAAAAAGCCCGTACTTTCGTCCGAGcg > 2:317589/1‑148 (MQ=255) aCTCGCTTCGCCCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGct < 2:836469/149‑1 (MQ=25) tcgcttcgctCGCCCTGCGGGCAGCCCGCTCCTGGCGGTCTCGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGctct > 2:1959538/1‑149 (MQ=11) tcgcttcgctCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGGTATACACGAAAAAAAAGCCCGTACTTTCGTACGAGctct > 2:1347826/1‑149 (MQ=25) tcgcttcgctCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGctct > 2:1849914/1‑149 (MQ=35) tcgcttcgctCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTAGTACGAGatct > 2:1870978/1‑149 (MQ=21) cgcttcgctCGCCCTGCGGGCAGCCCGCTCACTGTGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCTCACTTTCGTACGCGCtctt > 2:900762/1‑149 (MQ=255) gcttcgctCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCtcttc < 2:16486/149‑1 (MQ=35) gcttccctCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGCCCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCtcttc < 2:141863/149‑1 (MQ=25) cttcccaCGCCCTGCCGCCAGCCCGCCCACTGCGTCCACGCTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCtcttct < 2:1605665/149‑1 (MQ=11) ttcgctCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAGTACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTcttctt > 2:1575978/1‑149 (MQ=21) tcgctcgcCCTGCGGGCAGCCCGCTCACGGCGTTCACGGTCTGCCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCttt < 2:386594/149‑1 (MQ=25) ctcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaaa < 2:1531967/149‑1 (MQ=35) ctcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCACGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTaaa > 2:103549/1‑149 (MQ=25) ctcgcCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCGGACGCGCGTCGTGGAGGGCCGGACGGGGCATCAGGTCGCAGCGGTCGGTGCACGCCGCGTAATAAAAACACGTACTTTCGTACGAGCtcttct > 1:271730/1‑144 (MQ=2) tGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACAGGCCGTCGCCAGGTGTCGACCCCCGGTCGGGGCTGCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCCCTTCTTTAAata > 1:1818336/1‑144 (MQ=11) cGGGCAGCCCGCTCACTGCGTTCACGGTCAGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGGCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCggg > 2:1248807/1‑148 (MQ=21) | TTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGT > CP009273/1092370‑1092665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |