BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 360280	88 (1.260)	65 (1.030)	5/250	NT	59.7%	intergenic (‑214/+381)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
*	?	CP009273	= 3940171	8 (0.130)	65 (1.030)	5/250	NT	59.7%	noncoding (112/120 nt)	rrfC	5S ribosomal RNA of rrnC operon

Only 100 of 183 total aligned reads displayed.

TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCC  >  CP009273/360132‑360428

tGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGG                                                                                                                                                      <  2:837497‑M1/149‑1 (MQ=255)

tGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGG                                                                                                                                                      >  1:1233456‑M1/1‑149 (MQ=255)

tGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGG                                                                                                                                                      <  2:226800‑M1/149‑1 (MQ=255)

tGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCATGG                                                                                                                                                      >  2:433900‑M1/1‑149 (MQ=255)

 gCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTAGTTGATGCCTggg                                                                                                                                                     >  2:896144/1‑149 (MQ=11)

  cccGCCACCCTCCGGGGCGTTGCTTCGCAACGTGCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGCGTGCACCGACAAACAACAGCTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGca                                                                                                                                                    <  2:578686‑M1/149‑3 (MQ=255)

  cccGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTgggg                                                                                                                                                    <  1:1151000/149‑1 (MQ=31)

    cGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaa                                                                                                                                                  >  2:1138314/1‑149 (MQ=32)

     gCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaat                                                                                                                                                 >  2:402724/1‑149 (MQ=33)

      ccACCCTCCGGGCCGTTGCTTCGCATCGTTCAAATCCGCTCCTGGAGGATTTTTTCTACTCAGGAGAGCGTTCAACGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                <  1:346353/149‑1 (MQ=11)

      ccACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTTCCGGCGGATTTGTCCTTCTCAGGGGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                <  1:1012651/149‑1 (MQ=255)

      ccACCCTCCGGGCCGTTGCGTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCTACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                <  1:517433/149‑1 (MQ=21)

         cccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGGGCGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTGTCGACTGGGCCTTTCGGTTTATTTGATGCCTGgggaattggg                                                                                                                                             >  1:722694/1‑149 (MQ=11)

         cccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggcattggg                                                                                                                                             >  1:243190/1‑149 (MQ=21)

         cccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccct                                                                                                                                             <  1:1168785‑M1/149‑10 (MQ=255)

          ccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGCGAGCGTTCACCAACAAACAACAGATAAAACGAAAGGCCCAATCTTTGGACTGAGCCTTTAGTTTTATTTGATGCCTGGcagtccccca                                                                                                                                            >  2:73993‑M1/1‑139 (MQ=255)

           cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCGGTCGGATCTGTCCTCCGCAGGCGCGCGTTCCCCCACAAGCAACAGATAACACGACAGGCCCCGTGTTTCGACGGTGCCTTTCGTTTTATTTGATGCCTGgggaattgggaa                                                                                                                                           <  2:506974/149‑1 (MQ=11)

           cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTGTATTTGATGCCTGGccgttccctac                                                                                                                                           >  1:637908‑M1/1‑138 (MQ=255)

            tCCGGGCCGTTGCTTCGCATCGTTCAATTCCGCTCCCGGCGGCTTTGTCCTCCTCAGGAGTGCCTTTCTCGACAAACACCAGGTTATACCGAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaat                                                                                                                                          <  2:1151089/149‑1 (MQ=14)

            tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGGTGCCTGggggattggggat                                                                                                                                          >  2:29590/1‑149 (MQ=255)

            tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGggggattgggaat                                                                                                                                          >  2:1103888/1‑149 (MQ=37)

            tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACAGACAAAAAACAGCTAAAACTAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctact                                                                                                                                          >  1:358919‑M1/1‑137 (MQ=255)

              cGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctattct                                                                                                                                        <  2:963123‑M1/149‑15 (MQ=255)

               gggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGCCAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGATTTATTTGCTGCCTGGcaggtccctgctctc                                                                                                                                       >  2:1217167‑M1/1‑134 (MQ=255)

                    tgtGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCtt                                                                                                                                  <  1:87980/147‑1 (MQ=255)

                    gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatg                                                                                                                                  <  1:374810‑M1/149‑21 (MQ=255)

                    gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCtt                                                                                                                                  <  1:786840/149‑1 (MQ=255)

                       gCTTCGCAACGTTCAAATCCGCGCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCAAGTCATTCTACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatgggg                                                                                                                               <  1:41166‑M1/149‑24 (MQ=255)

                         ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTTCTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                             <  1:1096962/149‑1 (MQ=255)

                         ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggag                                                                                                                             >  1:769972‑M1/1‑124 (MQ=255)

                         ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                             <  2:213153/149‑1 (MQ=255)

                          tCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGCTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGAc                                                                                                                            >  1:610082/1‑149 (MQ=255)

                            gCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGAGGGATAGGGAATAAATTCTTGAA‑ACGaa                                                                                                                         >  2:253779/1‑149 (MQ=14)

                                 gTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccaca                                                                                                                     <  1:68047‑M1/149‑34 (MQ=255)

                                 gTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGCcagttccctactctcgtatggggagaccccaca                                                                                                                     <  1:790583‑M1/149‑34 (MQ=255)

                                 gTTCAAAGCCCCTCCCGGCGGATTTTGCCTTCTCAGGAGTGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccaca                                                                                                                     <  1:199257‑M1/149‑34 (MQ=255)

                                  ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGc                                                                                                                    <  2:409996/149‑1 (MQ=255)

                                    cAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTGTATTTGATGCCTGGctgttccctaccctcgcatggggggaccccacacta                                                                                                                  >  2:475376‑M1/1‑113 (MQ=255)

                                      aaTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTTTTTCGACTGAGCCTTTCATTTTATTTGATGCCTGGGGAATTGGAAATTAATTCTTGAAGACGAAAGGGCCTCg                                                                                                                >  1:292333/1‑149 (MQ=255)

                                      aaTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCg                                                                                                                <  1:484041/149‑1 (MQ=255)

                                        tccacacccGGCGGATTTCTCCTACTTAGGAGTGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGGTTTATTTGCTGCCTGGGGAATTGGGAATTCATTCTTGAAGACGAAAGGGCCTCGTg                                                                                                              >  2:183402/7‑149 (MQ=18)

                                        tCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccat                                                                                                              >  1:318078‑M1/1‑109 (MQ=255)

                                         ccGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGACAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTGTTTGCTGCCTGGcagttccctactctcgcatggggagaccccacactaccacg                                                                                                             >  1:72708‑M1/1‑108 (MQ=255)

                                         ccGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGa                                                                                                             <  1:1058435/149‑1 (MQ=255)

                                          cGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAAGTGGGAAGTAATTCTTGAAGACGAAAGGGCCTCCTGAt                                                                                                            >  2:703339/1‑149 (MQ=255)

                                           gCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATa                                                                                                           <  1:561274/149‑1 (MQ=255)

                                                      aTTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAttttt                                                                                                >  1:1079613/1‑149 (MQ=255)

                                                       tttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGGCCGGTCTTTCGACTGCGCCTTTCGTTTTATTTGATGCCTGGGGAACTGGGAATTACTTCTTGAAGACGAAAGGGACTCAGGGTACGCCTAtttttg                                                                                               >  2:505366/1‑148 (MQ=18)

                                                       tttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCGCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGGAAGGGCCTCGTGTTACGCCTAtttttt                                                                                               >  1:710390/1‑148 (MQ=255)

                                                       tttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCCTTCGACTGAGCCTTTCGCTTTATTTGATGCCCGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtt                                                                                               <  1:998120‑M1/149‑56 (MQ=255)

                                                       tttGTCCGACTCAGAAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATGTGATTCCTTGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtt                                                                                               <  2:600360‑M1/149‑56 (MQ=255)

                                                        ttgccctgggcAGGAGGGCGTTCACCGACAAACAACAGATAAAACGAAAGGGCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                              <  1:939685/139‑1 (MQ=21)

                                                          gctcgtcgcaggagagcGTTCACCGACAAACAACAGAAAAAACGAAAGGCCCAGCCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctctcatggggagaccccacactaccatcggcgctacggcgtttca                                                                                            <  2:60999‑M1/141‑59 (MQ=255)

                                                           tCCTACTCAGGAGGGCCTTCACCGACAAACAACAGATAGAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGTcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcac                                                                                           <  2:1060769‑M1/149‑60 (MQ=255)

                                                           tCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcac                                                                                           <  1:267852‑M1/149‑60 (MQ=255)

                                                              tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttc                                                                                        <  2:785474‑M1/149‑63 (MQ=255)

                                                               ccgcaggAGAGCGTTCACCGACAAACAACAGGTAAAACGAAAGGCCCAGTCTTTCGGCTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttct                                                                                       <  1:946894‑M1/146‑64 (MQ=255)

                                                               aCTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttct                                                                                       <  1:1198073‑M1/149‑64 (MQ=255)

                                                                 tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccccactaccatcggcgctacggcgtttcactcctga                                                                                     >  1:501434‑M1/1‑84 (MQ=255)

                                                                 tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccccactctcgcatggggagaccccacactaccatcggcgctccggcggttcacttctgg                                                                                     >  2:195589‑M1/1‑84 (MQ=255)

                                                                 tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGGTAATg                                                                                     >  1:944074/1‑149 (MQ=255)

                                                                      agagCGTTCACCGACAAACAACAAATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATg                                                                                <  1:533174/149‑1 (MQ=255)

                                                                          cGTTCACCGACAAACAACAGAGAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcat                                                                            <  1:191425‑M1/149‑75 (MQ=255)

                                                                             tCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctcctctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggg                                                                         <  1:1014158‑M1/149‑78 (MQ=255)

                                                                             tCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggg                                                                         >  1:1184357‑M1/1‑72 (MQ=255)

                                                                              cACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatgggg                                                                        >  2:1002846‑M1/1‑71 (MQ=255)

                                                                                 cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtca                                                                     <  2:1184357‑M1/149‑82 (MQ=255)

                                                                                  gACAAACAACAGATAAAACGAAAGGCCCAATCTTTCGACGGAGCCTTTCGTTTTATTTGATGGCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGc                                                                    <  1:183402/149‑1 (MQ=255)

                                                                                   acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatgggggcagg                                                                   >  2:714985‑M1/1‑66 (MQ=255)

                                                                                   acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                   <  1:744036/149‑1 (MQ=255)

                                                                                   acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATATTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                   >  1:844766/1‑149 (MQ=255)

                                                                                    caaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggt                                                                  <  2:358919‑M1/149‑85 (MQ=255)

                                                                                     aaacaaCAGATAAAACGAAAGGCCCAGTCCTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                 <  1:199715/149‑1 (MQ=255)

                                                                                     aaacaaCAGATAAAACGAAAGCCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                 <  1:637086/149‑1 (MQ=255)

                                                                                       acaacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtggg                                                               >  1:121598‑M1/1‑62 (MQ=255)

                                                                                        caacaGATAAAACGAAAGGCCCAGGCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCa                                                              <  1:402724/149‑1 (MQ=255)

                                                                                          acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATCTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                            >  2:638311/1‑149 (MQ=255)

                                                                                              aTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCttt                                                        >  2:656881/1‑149 (MQ=255)

                                                                                                 aaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgggttcggcatggggtcaggtgggccccgcgcgc                                                     >  1:895414‑M1/1‑52 (MQ=255)

                                                                                                  aaCGAAAGGCCTAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCAc                                                    <  1:1028947/149‑1 (MQ=255)

                                                                                                  aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgct                                                    >  1:466770‑M1/1‑51 (MQ=255)

                                                                                                   aCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgcta                                                   <  1:433900‑M1/149‑100 (MQ=255)

                                                                                                    cGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggcccaccgcgctac                                                  >  1:69122‑M1/1‑49 (MQ=255)

                                                                                                     gAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGcagttcgctactctcgcatggggagaccccacactaccatcggagatacgtcgtaccacttctgagttcggcatgggggcaggtgtgaccaccgcgctcct                                                 >  1:235465‑M1/1‑48 (MQ=255)

                                                                                                               gTCTTTCGACTGCACGTTTAGTTTTATTTGATGCATGGGCAAATGGGAATTAATTCTTGAAGATGAAATTACCGTTTGATACGGCTGTTTTTGTAGGTTAGTGAACGGGGAAAGTCCAGCCGTCCACGCTTTGCGCGCGCGGGTGCCGc                                       >  2:773/1‑149 (MQ=255)

                                                                                                                    tCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTACTACTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCAt                                  >  1:1164798/1‑149 (MQ=255)

                                                                                                                       ccatagcctGTCGCTTTATTTGATGTCTGGcagttccctgctctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctg                               <  2:801746‑M1/145‑120 (MQ=255)

                                                                                                                         tGAGCCTTTCGTTTTATTTGATGCCTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtt                             >  1:1107572‑M1/1‑28 (MQ=255)

                                                                                                                          gAGCCTTTCGTTTTAGTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGtt                            <  1:442646/149‑1 (MQ=255)

                                                                                                                           acccTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAACTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCCGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTc                           <  1:253779/147‑1 (MQ=255)

                                                                                                                                   gTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTCTAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCgggt                   >  1:396692/1‑147 (MQ=255)

                                                                                                                                               gCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGTTtccgagacccgcg       <  2:944074/149‑12 (MQ=255)

                                                                                                                                                ccTGGcagttccctactctcgcatggggaggccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcatcagaccgcttctgcgttct      <  1:982382‑M1/149‑145 (MQ=255)

                                                                                                                                                ccTGGcagttccctactctcgcatggggaaaccccacactaccatcgacgctacggcgcttcacttctgagttcggcatggggtcaggtggggccaccgcgctacggccgcccggcgaattctgtttcatccgcccgcttctgcggtct      >  1:661619‑M1/1‑5 (MQ=255)

                                                                                                                                                 ctcgcagttccctaccctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccaggcaaattctgtttcatcagaccgcttctgcgttctg     <  1:1074555‑M1/146‑146 (MQ=255)

                                                                                                                                                 cTGGcagttccctactctcgcatggggagaccccacactaccatcggcgctacggcgtttcacttctgagttcggcatggggtcaggtgggaccaccgcgctacggccgccagacaaatt                                  >  2:337743‑M1/1‑4 (MQ=255)

                                                                                                                                                 cTGGcagttccctactctcgcatggggagacccca                                                                                                                       >  1:51090‑M1/1‑4 (MQ=255)

                                                                                                                                                  tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTg    >  2:513817/1‑149 (MQ=255)

                                                                                                                                                    gggaatggggaattAATTCTTGAAGACGAAAGGGCCTTGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCGGCCGACCAGGCTTTTCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGcc  <  2:124623/149‑1 (MQ=255)

                                                                                                                                                    gggaatggggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGcc  <  1:73574/149‑1 (MQ=255)

TGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCC  >  CP009273/360132‑360428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.