BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 1046001	66 (0.940)	54 (0.770)	35/276	NT	55.4%	intergenic (+15/+418)	insB1/cspH	IS1 transposase B/stress protein, member of the CspA‑family
*	?	CP009273	1973115 =	21 (0.300)	54 (0.770)	35/276	NT	55.4%	intergenic (‑661/‑119)	flhD/uspC	flagellar class II regulon transcriptional activator, with FlhC/universal stress protein

Only 100 of 130 total aligned reads displayed.

AATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTGG  >  CP009273/1045854‑1046149

   tGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttat                                                                                                                                                  >  1:1229866‑M1/1‑145 (MQ=255)

    gAGCGGTATAACCTGACTCGGCGGCAGCACCTGGCACGACTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACATAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatc                                                                                                                                                 <  2:1157487‑M1/149‑6 (MQ=255)

     aGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAt                                                                                                                                                >  1:1101883/1‑149 (MQ=34)

       cGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatcttt                                                                                                                                              >  2:249032‑M1/1‑141 (MQ=255)

        ggTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatcttga                                                                                                                                             <  2:632071‑M1/149‑10 (MQ=255)

         gTATAACCTGAATCCGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttac                                                                                                                                            <  2:1079486‑M1/149‑11 (MQ=255)

          tatcACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCCGTCGTTCTCAAAATCGGTGGATCTGCATGACAAAGTCATCGGGCATCATCTGAACGCAACCCACAATCAAGAAGTGGGAGAAATTCCAGCCAAtacgca                                                                                                                                           >  2:527257/1‑147 (MQ=11)

          tataACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttact                                                                                                                                           >  2:942606‑M1/1‑138 (MQ=255)

          tataACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAtacgta                                                                                                                                           >  1:1120271/1‑149 (MQ=35)

            taACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaa                                                                                                                                         <  2:1107297‑M1/149‑14 (MQ=255)

            taACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAAtacgtacg                                                                                                                                         >  2:243787/1‑149 (MQ=37)

              aCCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCt                                                                                                                                       >  2:757673/1‑149 (MQ=38)

                cTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATAAGTACGCTTg                                                                                                                                     >  2:943295/1‑149 (MQ=37)

                 tGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATGAAACACTATCAATAAGGTCGAGGCAGTCCCtcatctttactaataatc                                                                                                                                    >  2:507688‑M1/1‑131 (MQ=255)

                 tGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTga                                                                                                                                    >  2:171605/1‑149 (MQ=40)

                  gAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttagctttactaataatca                                                                                                                                   >  1:326429‑M1/1‑130 (MQ=255)

                  gAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTAGCTGTCGTTCTCAAACTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCgtatctttactaataatag                                                                                                                                   >  2:1173036‑M1/1‑130 (MQ=255)

                     tCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATc                                                                                                                                >  1:1025369/1‑149 (MQ=255)

                     tCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATc                                                                                                                                >  1:202840/1‑149 (MQ=255)

                      gggtggCAGCGCCTTGCTCGGCTGGTTCGGACCGTGCTGCCGTTCTCAAATTTGGTGGAGCTGGTTGACAAAGTCATCGGGCATTATCTGATCATAGATCACTATCAATAAGTTCGAGTCATTACCGACAATACGTACGCTTGAGATCa                                                                                                                               <  2:1050256/145‑1 (MQ=9)

                         gggCAGGACGTGGCACGGCGGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCAGTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGa                                                                                                                            <  2:117162/148‑1 (MQ=14)

                         aGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGa                                                                                                                            <  2:620684/149‑1 (MQ=255)

                           gcagcaCCTGGCACGGCTGGGACGTAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatat                                                                                                                          >  1:921640‑M1/1‑121 (MQ=255)

                           gcagcaCCTGGCACGGCTGGGACGGACGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatat                                                                                                                          <  2:334510‑M1/149‑29 (MQ=255)

                              gcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTc                                                                                                                       >  1:714668/1‑149 (MQ=255)

                                   tgccacgGCTGGGACGCGAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACTTAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgt                                                                                                                  <  2:832928‑M1/146‑37 (MQ=255)

                                   tGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACtt                                                                                                                  >  1:425821/1‑149 (MQ=255)

                                      gaCGGCCGGGCCGGAAATCGCTGTCGTTCTCAAAAGCGGTGGAGCTGCATGACAAAGTTATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGa                                                                                                               <  1:44851/148‑1 (MQ=18)

                                      cACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGa                                                                                                               <  2:862028/149‑1 (MQ=255)

                                      cACGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGa                                                                                                               <  1:341919/149‑1 (MQ=255)

                                        cGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGACCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgac                                                                                                             >  1:602386‑M1/1‑108 (MQ=255)

                                         ggCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgacc                                                                                                            <  2:464572‑M1/149‑43 (MQ=255)

                                          gCTGGTACGGAAGTCGCTGTCGTTCTCCAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccg                                                                                                           >  1:1173775‑M1/1‑106 (MQ=255)

                                            tGGGACGGAAGTCGCTGTCGTTCTCAAAATTGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATaa                                                                                                         <  2:1030934/149‑1 (MQ=255)

                                            tGGGACGGAAGTCGCTGTCGTTCTCAAAAGCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTAGACACATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATaa                                                                                                         <  1:853250/149‑1 (MQ=255)

                                            ggggACGTAAGTCGCTGTCGTGCTCAAAATCGGTGGAGCTGCATGACAAAGGCATCGCGCATTATCTGAACATAAAACACTATCAATAAGTCGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATaa                                                                                                         <  2:88089/148‑1 (MQ=18)

                                                          cTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAAt                                                                                           <  2:109084/149‑1 (MQ=255)

                                                               gTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggcttgggtccgttct                                                                                      >  2:295989‑M1/1‑85 (MQ=255)

                                                                ttCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctc                                                                                     <  1:493328‑M1/149‑66 (MQ=255)

                                                                ttCTCAAAATCGGTGGAGCTGCAAGACAAAGTCATCGGGCCTTATCTGAACACAAAACACTATCAATAAGTTGGAGTCATTACCttatctatattaataaccagcctcatgctgacgggtttgaccgagttgggattgcgtcgtttctc                                                                                     <  1:605375‑M1/149‑66 (MQ=255)

                                                                   tcAAACTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccat                                                                                  <  1:508943‑M1/149‑69 (MQ=255)

                                                                   tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACCCTATCAAGAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccat                                                                                  <  1:1025504‑M1/149‑69 (MQ=255)

                                                                   tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccat                                                                                  <  1:925217‑M1/149‑69 (MQ=255)

                                                                   tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatcttgactaagaatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccat                                                                                  >  1:717015‑M1/1‑81 (MQ=255)

                                                                   tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTc                                                                                  <  2:1007114/149‑1 (MQ=255)

                                                                   tcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACCATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTc                                                                                  <  2:1389/149‑1 (MQ=255)

                                                                   acaAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccat                                                                                  >  2:603335‑M1/2‑81 (MQ=255)

                                                                    cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccatt                                                                                 >  1:1113419‑M1/1‑80 (MQ=255)

                                                                    cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagtggggattgcgtcgtttctccatt                                                                                 >  1:964154‑M1/1‑80 (MQ=255)

                                                                       aaTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTCTACGGTGCGTGGGAAATCTACCTGCCCTcg                                                                              >  1:281661/1‑148 (MQ=18)

                                                                          cGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagt                                                                           <  2:47923‑M1/149‑76 (MQ=255)

                                                                               gAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCtt                                                                      >  2:836823/1‑149 (MQ=255)

                                                                               gAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCATCATACCGCtt                                                                      >  1:451414/1‑149 (MQ=255)

                                                                               gAGCTGCATGACAAAGTCATCGGGCATTATCAGAACATAAAACACTATCAATAAAGTGGAGTCATTACCCACAATACGTACGCTTGAGATCAGGACTGTCTACTTTGGGTATAACACCCGTGTGAACACTCCCTATCTTCATACCGcgt                                                                      >  2:517516/1‑147 (MQ=21)

                                                                                aGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagct                                                                     >  1:311655‑M1/1‑68 (MQ=255)

                                                                                aGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggactaaagat                                                                     >  1:633618‑M1/1‑68 (MQ=255)

                                                                                  cTGCAGGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATGAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCa                                                                   <  1:409978/149‑1 (MQ=255)

                                                                                   tgtaTGACAAATTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGCGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCAc                                                                  <  1:19043/146‑1 (MQ=255)

                                                                                    gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGTATTGTCTACTTTGAGTATAACATCCTAGATAAAGCTCCCTTTCCTCATACCGCTTGCACt                                                                 <  2:882045/149‑1 (MQ=25)

                                                                                        gACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtc                                                             >  1:910801‑M1/1‑60 (MQ=255)

                                                                                           aatggcagcGGGCATTATCTGAACATAAACCACTATCAATAAGTTGCAGTCATGACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACt                                                          <  1:524839/141‑1 (MQ=38)

                                                                                                cATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaag                                                     >  1:1109173‑M1/1‑52 (MQ=255)

                                                                                                cATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCggg                                                     <  1:692886/149‑1 (MQ=255)

                                                                                                 aTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGt                                                    >  2:158100/1‑149 (MQ=255)

                                                                                                  tCGGGCATGACCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTa                                                   <  1:130279/149‑1 (MQ=255)

                                                                                                  tCGGGCAGTACCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTa                                                   <  1:63998/149‑1 (MQ=255)

                                                                                                  tCGGGAATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTa                                                   <  1:382044/149‑1 (MQ=255)

                                                                                                    gggCATTATCTGAACATAAGACACTGTCTCTTAGTTTGAGTCATTAACttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccagtaggagtaaagctttaatgtcacctgaagttca                                                 <  1:470952‑M1/149‑102 (MQ=255)

                                                                                                    gggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTACACTATCTACTGCGGGTAga                                                 >  2:590299/1‑148 (MQ=255)

                                                                                                     ggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCCTTACCttatctttactcataatccgactaatatttacctgtttgaccgagtggggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcac                                                <  2:602232‑M1/149‑103 (MQ=255)

                                                                                                             cTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataag                                        <  2:921640‑M1/149‑111 (MQ=255)

                                                                                                              tGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataagg                                       >  1:1115139‑M1/1‑38 (MQ=255)

                                                                                                              tGAACATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagaaaagctttaatgtcacctcaagttctcagaaaaagg                                       >  2:958190‑M1/1‑38 (MQ=255)

                                                                                                                aaCATAAAACACTATCCATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaa                                     <  2:526802‑M1/149‑114 (MQ=255)

                                                                                                                aaCATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaa                                     >  1:1060525‑M1/1‑36 (MQ=255)

                                                                                                                aaCATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCag                                     >  1:720246/1‑149 (MQ=255)

                                                                                                                  cATAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggatagcgtcgtttctccattaggagaacagcttgaatgtcacctgaagttcacagaataaggaaaa                                   >  1:840385‑M1/1‑34 (MQ=255)

                                                                                                                   aTAAAACACTATCAATAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaacag                                  <  2:121227‑M1/149‑117 (MQ=255)

                                                                                                                    tAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAggg                                 >  2:511094/1‑149 (MQ=255)

                                                                                                                       aaCACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGaaa                              <  1:243787/149‑1 (MQ=255)

                                                                                                                                aaTAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGTGTAGGAAAGGCGCGCAGAGGGAAATATAAGAtt                     <  2:1191852/149‑1 (MQ=255)

                                                                                                                                aaTAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGAtt                     <  2:1137102/149‑1 (MQ=255)

                                                                                                                                aaTAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGAtt                     >  1:475008/1‑149 (MQ=255)

                                                                                                                                aaTAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAACATAAGAtt                     >  2:175112/1‑149 (MQ=255)

                                                                                                                                 aTAAGTTGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaacaggttatgagctatag                    <  2:238696‑M1/149‑131 (MQ=255)

                                                                                                                                 aTAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATAAGGCTGGCGCTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTg                    >  1:1212351/1‑149 (MQ=255)

                                                                                                                                 aTAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGAGTGTGTACTTTGAGTATAACATCCTTGTGAAATCTACCTTTCCTCATACCGGTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTg                    >  2:1130632/1‑149 (MQ=255)

                                                                                                                                   caGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACGATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGtt                  <  1:527099/148‑1 (MQ=255)

                                                                                                                                     gTTGGAGTCATTACCGACAATTCGTACGCTTGAGATCAGGATTGTCTACTTTGAGGATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTaa                <  2:1054387/149‑1 (MQ=255)

                                                                                                                                     gTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTACGGGTAGGAAAGACGAGCAGGGGGAAGTCTAAGATTGTTaa                >  2:240820/1‑149 (MQ=255)

                                                                                                                                     gTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCCTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTaa                >  1:1231580/1‑149 (MQ=255)

                                                                                                                                      ttGGAGTCATTACCttatctttactaatactcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaacaggttatgagctatagcaata               <  1:356348‑M1/149‑136 (MQ=255)

                                                                                                                                      ttGGAGTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaacaggttatgagctatagcaata               <  1:608600‑M1/149‑136 (MQ=255)

                                                                                                                                       tGGATTCATTACCGACCATACGTACGCTTGAGCTCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACt              <  2:661007/149‑1 (MQ=255)

                                                                                                                                       tGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACt              <  2:1025369/149‑1 (MQ=255)

                                                                                                                                         gAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTAt            >  1:1185768/1‑149 (MQ=255)

                                                                                                                                           gTCATTACCttatctttactaataatcagactaatatttacctgtttgaccgagttgggattgcgtcgtttctccattaggagtaaagctttaatgtcacctgaagttcacagaataaggaacagtttatgagctatagcaatattctt          <  1:811326‑M1/149‑141 (MQ=255)

                                                                                                                                             cATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATcccc        <  1:172491/149‑1 (MQ=255)

                                                                                                                                               ttACCGACAATACGTACGCTTGAGCTCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTACTCATACCGCTTGCACTATATACTGCGGGAAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCct      >  2:365787/1‑149 (MQ=255)

                                                                                                                                                tcccGACCATACCGACGCTTGAGATCAGGATTGTCTCCTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCACACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCctc     <  1:636701/147‑1 (MQ=255)

AATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATACGTACGCTTGAGATCAGGATTGTCTACTTTGAGTATAACATCCTTGTGAAATCTCCCTTTCCTCATACCGCTTGCACTATATACTGCGGGTAGGAAAGGCGCGCAGAGGGAAATATAAGATTGTTAACTATCCCCCTCTGG  >  CP009273/1045854‑1046149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.