| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 2,160,620 | IS5 (+) +4 bp | 18.0% | intergenic (+110/+160) | yegQ → / ← ogrK | putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome) |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2095230 = | NA (NA) | 7 (0.100) | 6/276 | NT | 14.2% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 2160620 = | 41 (0.600) | intergenic (+110/+163) | yegQ/ogrK | putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome) | |||||
| * | ? | CP009273 | = 2096424 | NA (NA) | 11 (0.160) | 10/276 | NT | 20.7% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 2160623 | 41 (0.600) | intergenic (+113/+160) | yegQ/ogrK | putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome) | |||||
CTCCGGGGAAACCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGCCCCTCGACTGAG > CP009273/2160474‑2160765 | ctcCGGGGAAACCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTa < 2:536281/149‑1 (MQ=255) tcCGGGGAAACCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATACCACATAAAATCCTAg > 2:106367/1‑149 (MQ=255) tcCGGGGAAACCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAg > 2:2031/1‑149 (MQ=255) ccGGGGAAACCACGCGTAATCCCCAGGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGg < 1:619906‑M2/149‑2 (MQ=255) cGGGGAAACCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCt > 1:1057180/1‑149 (MQ=255) aaaCCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCCTAAAATGCTAGCTGTAcc > 1:778002/1‑149 (MQ=255) aaaCCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTAcc > 1:424475/1‑149 (MQ=255) ccACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTGTGTGAAAACCCTAACCCCTAATAGGCAAGCTGGACCAgg > 1:565980/1‑149 (MQ=255) ccACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcg > 1:1140134‑M2/1‑139 (MQ=255) ccACGCGTAACCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcg > 1:526305‑M2/1‑139 (MQ=255) aCGCGTAATCCCCACGGTAAGTGATTAATCTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTACGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGaa < 2:814996/149‑1 (MQ=255) aCGCGGAATCCCCACGTTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGaa < 2:213692/149‑1 (MQ=255) cgctaaaTCCCAACGGTAAGGAATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAac < 1:796979/144‑1 (MQ=255) cgcgTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAac < 1:963515/149‑1 (MQ=255) ccccACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCAcctcct < 1:1092727/149‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGTACCAGGAACCACCTCCTTa < 1:390737‑M2/27‑1 (MQ=255) ccACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTa < 1:833875/149‑1 (MQ=255) aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGTACCAGGAACCACCTCCTTAGCCtgt < 1:1199602‑M2/33‑1 (MQ=255) aaTTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgttt > 1:1227770‑M2/1‑111 (MQ=255) aTTTCGATTATTTTTCCCGGATGGAAAATGCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACGTCCTTAGCCTGTGTAATCTccc > 1:784287/1‑149 (MQ=255) tttCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggagcgaacaagtccctgatatgagatcatgtttgt > 1:608040‑M2/1‑109 (MQ=255) tttCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc > 2:1026034‑M2/1‑98 (MQ=255) ttCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 1:33554‑M2/149‑53 (MQ=255) cGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCCTTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGGGCAATCCCCCTTACACCGGCTTAtttt > 2:215186/1‑149 (MQ=255) cGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGTTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCCTAtttt > 2:1095352/1‑149 (MQ=255) ggATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGCCATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTAttttt < 1:1023703/149‑1 (MQ=255) gAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTAcgc < 1:853483/149‑1 (MQ=255) aaaTTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTAccggt > 1:564399/1‑145 (MQ=255) aTTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGTAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCGCGCTAATACCGGCTTATTTTTTACGCGCaa > 1:954659/1‑149 (MQ=255) ttCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACAAGGGCTTATTTTTTACGCGTAAt > 1:568662/1‑149 (MQ=255) ttCTTAGAAACCGATCACATACAGCTGCAATTGTTAATAGGGTCGTTCGTTTCGCTGAAAAACCTAACCCATAAAATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgggcccatagaacagggttcac < 1:298491‑M2/149‑68 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACAGGCTTATTTTTTCCGCCTAATa > 2:168510‑M2/78‑149 (MQ=255) aactcggcccaaacaagaagagatgaaatgactgagtcagccgagaagaatttccccgctaattcgcaccttccCTAGCTGTACCAGGAACCACCTCCTTAAACTGTGTAAATTCACAAACACGGGCTTATTTTTTACGCGTAATACaa > 2:566081‑M2/75‑149 (MQ=255) cGATCACATACAGCTGCATTTATTAAGGTTATCATCAGTTTCGCTGAAAAACATAACCCATAACATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc > 2:619906‑M2/1‑71 (MQ=255) ataacaTACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGGACCAGGAACCACCTCCTTAGCCTGGGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATaaa < 2:469293/146‑1 (MQ=255) aTCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATaaa > 1:525148/1‑149 (MQ=255) cccaTACAGCTCCATTTATTAAGCTTATCATCCGTTTCGCTGAAAAACATAACCCCCAAATCATTATCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAg < 1:596819/147‑1 (MQ=255) agcatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttgttcgcaccttccCTAGCCGTACCCGGAACCACCTCCGTATCCTGTGTTATCTCCCTTACACGGGCTTATTTTTTCCGCGTAATACAATGAAATAAAAg < 2:433504‑M2/86‑1 (MQ=255) taTACAGCTGCATTTATTAAGGTTAGCATCCGTTTCGCTTAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGCAATACAATGAAATAAAAGGa < 2:596998/148‑1 (MQ=255) aTACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACGTCCTTAGCCTGTGTAATCTCCCTTCCCCGGGCTTATTTTTTACGCGTAATACAATGAAAAAAAAGGat > 1:80691/1‑149 (MQ=255) tACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGatt > 1:204191/1‑149 (MQ=255) gCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGatttatt < 2:172309/149‑1 (MQ=255) cTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 2:33554‑M2/1‑58 (MQ=255) tGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTCTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTc < 2:784287/149‑1 (MQ=255) gggtATCATCCGTTTGGTTGAAAAACACAACCCCTAAAATGCTAGCTGGACCAGGAACCCCCTCCTCAGCCTGTGTAACCTCCCTTACACGGGCCTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCca < 2:781577/146‑1 (MQ=255) ggTTATCATCCGTTGCGCTGAAAATCATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCca < 2:978259/149‑1 (MQ=255) ttATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTCCACGGGCTTCTTTTTTACCCGACATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCaaca > 2:559382/1‑149 (MQ=255) ttATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGATGTACGAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAAGAAAAGGATTTATTTCTGGTCACGTCcaca > 1:1166922/1‑149 (MQ=255) tcatcCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatcttgagccatagaacagggttcatcatgagtcatcaactggccgtggcggacagtgaatcctgcag < 1:1018040‑M2/149‑110 (MQ=255) agccGTTTCGCTGAAAAACATACCCCATCAGATGCTAGCTGTACCGGGACCGGTCTTTTTAGCGGTTGTAAAGTCCCTTAGATTGGCGTATTTTTCACGCTTAATATAAGGAATTAAAATAATTTATTTCGTGTCACGTCAACACAGTg < 2:591555/147‑1 (MQ=255) tcCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTGAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGa > 1:549820/1‑149 (MQ=255) ccGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGAc < 2:778002/149‑1 (MQ=255) ccGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGAc < 2:424475/149‑1 (MQ=255) tttCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACcac > 1:1199917/1‑149 (MQ=255) gCTGAAAAACATAACCCATAAAATGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc < 2:710699‑M2/149‑121 (MQ=255) cTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTACTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATCAAAGGCTTTATTTCTGGTCACGTCCACACATTGACCCCATCGa > 2:680558/1‑149 (MQ=255) tccccgcttattcgcaccttccCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTAACTCGTAATACAATGAACTAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACa < 1:848098‑M2/127‑1 (MQ=255) aaaaaCATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTGGCATGAGTTATCTCCCTTACACGGGCTTATTTTTTACGCGGAATACAATGAAATAAAAGGATTTATTTCTGGTCACGACCACACATTCTCCACATCGACaa > 1:243088/1‑149 (MQ=255) aaCCTAACCCATAAAATCCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACaaaaa < 1:254321/149‑1 (MQ=255) aaCATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACaaaaa < 1:163923/149‑1 (MQ=255) aTAACCGATATCATTCTCGCTGTACCAGGAACCTCCGCCTTCGCCTGTGTAATCTCCCTTACTCGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGc < 2:966665/149‑1 (MQ=255) ccATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCGCTTTCACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTGTTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGCCCCTc > 1:967156/1‑149 (MQ=255) caccttccCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTAACCCCATGGACAAAACAGCCTCTCGa > 2:927106‑M2/9‑149 (MQ=255) tAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTGTGGTAACGTCCAGACATTGAATACATCGGCAAAAAGGCCCCGCGAc > 2:809020/1‑149 (MQ=255) cacgCTGGCGGTACCAGGAACCACATCATAAGGCAGTGGAACCTCCGTTGCACGGGCTGAGTTTGTACGCGTAATACAATCAAAGAAAAGGATTTATTTCGGGTCACGTCCACACATTGAAAAAAAAAAAAAAAAAGCCCCTCGACTGa < 2:1113158/146‑1 (MQ=255) aaTGCTAGCTGGACCAGGAACCGCATCACAAGCGGTTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGAACACATCGACAAAAAAGCCCCTCGACTGa < 2:565980/149‑1 (MQ=255) agcCTAGCTCTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACCCCCGCTTCTATTTAACGCGTAATACAATGAAATAAAAGTATTTATTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGCCCCTCGACTGAg < 1:596777‑M2/146‑1 (MQ=255) | CTCCGGGGAAACCACGCGTAATCCCCACGGTAAGTGATTAATTTCGATTATTTTTCCCGGATGGAAAATTCTTAGAAACCGATCACATACAGCTGCATTTATTAAGGTTATCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGCCCCTCGACTGAG > CP009273/2160474‑2160765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |