Predicted mutation
evidence seq id position mutation freq annotation gene description
JC CP009273 3,676,871:1 +TAA 86.5% intergenic (‑64/+119) dctA ← / ← yhjK C4‑dicarboxylic acid, orotate and citrate transporter/cyclic‑di‑GMP phosphodiesterase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 367686624 (0.360)157 (2.290)
+AAT
102/260 NT 86.5% intergenic (‑59/+124) dctA/yhjK C4‑dicarboxylic acid, orotate and citrate transporter/cyclic‑di‑GMP phosphodiesterase
?CP009273 3676867 = 25 (0.360)intergenic (‑60/+123) dctA/yhjK C4‑dicarboxylic acid, orotate and citrate transporter/cyclic‑di‑GMP phosphodiesterase

Only 100 of 202 total aligned reads displayed.

TTCAGGATAGAAATGGCCAAGGAGAATACCAATGGCTATCGCTGTCAGGACCTGAAAGTAAAGGCTTTTAAACAGAGAGGTTTTCATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCT  >  CP009273/3676721‑3677014
                                                                                                                                                     |                                                                                                                                                         
ttCAGGATAGAAATGGCCACGGAGAATACCAATGGCTATCGCTGTCAGAGCCTGAAAGTAAAGGCTTGTAAACAGAGAGGTTTTCATAGGGTGTCCCTTAGTGAAACCGCCGGTCTTGTAAGGTTATGGGGTACCTGCGGCGTT‑‑ACA‑‑‑At                                                                                                                                                      >  2:1183464/1‑149 (MQ=255)
  caggatggaaagggccaaggagaatttcaatggctattgctgtcaggacctgaaagtaaaggcttttaaacagagagtttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaata‑‑‑a                                                                                                                                                       <  2:310813‑M2/2‑1 (MQ=255)
     gattgaaatggccaagggaattaccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaata‑‑‑ata‑‑‑a                                                                                                                                                 <  2:591334‑M2/5‑1 (MQ=255)
     gatagagatttccaaggagcacaccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcgcccttaaaata‑‑‑ata‑‑‑a                                                                                                                                                 >  2:272966‑M2/145‑149 (MQ=255)
     gatagaaatggccaaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcataggctgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaata‑‑‑ata‑‑‑a                                                                                                                                                 <  1:825524‑M2/5‑1 (MQ=255)
      atagaaatggccaaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ac                                                                                                                                                >  2:189989‑M2/144‑149 (MQ=255)
        agaaatggccaaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑acac                                                                                                                                              >  1:273811‑M2/142‑149 (MQ=255)
          aaatggccaaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaacccacttggcttggaaggagatggggtacctgcggccgtaaagtA‑‑‑ATA‑‑‑ACAccc                                                                                                                                            >  1:1157609‑M2/140‑149 (MQ=255)
          aaatggccaaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctggggccttataatA‑‑‑ATA‑‑‑ACAccc                                                                                                                                            >  1:367746‑M2/140‑149 (MQ=255)
          aaatggccaaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACAccc                                                                                                                                            >  2:1217381‑M2/140‑149 (MQ=255)
                  aaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGacaaca                                                                                                                                    >  1:1005565‑M2/132‑149 (MQ=255)
                  aaggagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGacaaca                                                                                                                                    >  1:440067‑M2/132‑149 (MQ=255)
                     gagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAGCATca                                                                                                                                 >  2:986361‑M2/129‑149 (MQ=255)
                     gagaataccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATca                                                                                                                                 >  1:1166174‑M2/129‑149 (MQ=255)
                       gaataccaatggctatcgctttcaggacctgagtgtagaggctttttaacagaggggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATcaca                                                                                                                               <  2:242904‑M2/23‑1 (MQ=255)
                       gaATACCAATGGCTATCGCTGGCAGGACCTGAAAGTAAAGGCTTTTAAACAGAGAGGTTTTCATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCAGGACAACATCCCCGaa                                                                                                                            >  2:1099006/1‑149 (MQ=255)
                          taccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGaa                                                                                                                            <  2:669518‑M2/26‑1 (MQ=255)
                           accaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGaaa                                                                                                                           <  2:248888‑M2/27‑1 (MQ=255)
                            ccaatggctatcgctttcatgacctgaaagtaaaggcttttaaacagagatgttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAAt                                                                                                                          <  1:99567‑M2/28‑1 (MQ=255)
                            ccaatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttgtggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAAt                                                                                                                          >  2:363793‑M2/122‑149 (MQ=255)
                             caatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATg                                                                                                                         >  1:455608‑M2/121‑149 (MQ=255)
                             caatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATg                                                                                                                         >  1:767510‑M2/121‑149 (MQ=255)
                              aatggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGt                                                                                                                        <  2:1142744‑M2/30‑1 (MQ=255)
                                tggctatcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggaacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACGGAAATGTAc                                                                                                                      >  1:326781‑M2/118‑149 (MQ=255)
                                     atcgctgtccggtcatgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGa                                                                                                                 <  1:88152‑M2/37‑1 (MQ=255)
                                     atcgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttttggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACGGAAATGTACCGGGa                                                                                                                 >  1:34042‑M2/113‑149 (MQ=255)
                                      tcgctgtcaggacctgaaagtaaaggcttttaaacagagaggctgtcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGAt                                                                                                                >  2:453440‑M2/112‑149 (MQ=255)
                                       cgctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATc                                                                                                               <  2:1113987‑M2/39‑1 (MQ=255)
                                        gctgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCa                                                                                                              <  2:329626‑M2/40‑1 (MQ=255)
                                          tgtcaggacctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATa                                                                                                            >  2:216390‑M2/108‑149 (MQ=255)
                                           gtcagttcctgaaaggaaaggcttttaaacagagaggttttcatagggtgtactttagtaaaaccacaggtcttgtatggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTGCCTGGATCATaa                                                                                                           <  1:892262‑M2/43‑1 (MQ=255)
                                                 acctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGaaa                                                                                                     <  1:582860‑M2/49‑1 (MQ=255)
                                                   ctgaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACa                                                                                                   >  1:742694‑M2/99‑149 (MQ=255)
                                                     gaaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtctagtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACaaa                                                                                                 >  1:803929‑M2/97‑149 (MQ=255)
                                                      aaagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACaaaa                                                                                                >  2:769205‑M2/96‑149 (MQ=255)
                                                       aagtaaagtcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaacatC‑‑‑ATA‑‑‑ACACCCAGACAACCTCACAGAAAGGTACctggatcataatgtaaaagaaaa                                                                                               >  2:492803‑M2/95‑138 (MQ=255)
                                                       aagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaacaacaggtcatgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACATAAATGTACCTGGATCATAAAAAAAACaaaaa                                                                                               <  2:78168‑M2/55‑1 (MQ=255)
                                                       aagtaaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaacacaggtcatgaaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCaaaaaaaaaaaaaaaa                                                                                               <  2:1030464‑M2/55‑1 (MQ=255)
                                                          taaatgcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑GTA‑‑‑ACACCAAGAGAACATCACCGAAGTGTACCTGGATCATAATTGAAACAAAAAGGt                                                                                            >  2:566298‑M2/92‑149 (MQ=255)
                                                          taaaggcttttaaacagagaggttttcatagggtgtcctttagtaaagccacgggtcttgtaaggtgatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGt                                                                                            >  1:1099818‑M2/92‑149 (MQ=255)
                                                          taaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtcaggttctggggtacctgcggccttaaaatA‑‑‑TTA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGt                                                                                            >  1:665472‑M2/92‑149 (MQ=255)
                                                           aaaggcttttaaacagagaggttttcatagggtgtcgtttagtaaaaccacaggtcttgcaaggttatgggggacctgcggccttaacatA‑‑‑ATA‑‑‑ACACCCAGACAACACCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGtt                                                                                           <  1:815704‑M2/59‑1 (MQ=255)
                                                           aaaggcttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGtt                                                                                           <  1:1052956‑M2/59‑1 (MQ=255)
                                                                 ttttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAg                                                                                     >  1:1195541‑M2/85‑149 (MQ=255)
                                                                  tttAACCAGGGAGGTTTTCATAGGGTGGTATTTAGTAATACCACAGGTCTTTTAAGGTTATGGGGTAACTGCGGCCTT‑‑AAA‑‑‑ATAATTACTCCCAGGCAACATCACAGAAATGTACCTTGATCATAATTGATACAAAAAGGTTatttagt                                                                                    <  2:116994/149‑7 (MQ=255)
                                                                   ttaaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACATAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGtt                                                                                   >  1:676265‑M2/83‑149 (MQ=255)
                                                                    taaacagagaggtattcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAATTGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGttt                                                                                  <  1:889149‑M2/68‑1 (MQ=255)
                                                                     aaacagagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTg                                                                                 >  2:388193‑M2/81‑149 (MQ=255)
                                                                      aacagagaggtgttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGa                                                                                <  1:791173‑M2/70‑1 (MQ=255)
                                                                          gagaggttttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTg                                                                            >  1:509105‑M2/76‑149 (MQ=255)
                                                                             agGTTTTCATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCCAGACAACATCAAAGAACCGAACCTGGATCATAAATGAAACAAAAAGGTTAAAAAGTTTAAGCTGgcgcgc                                                                      >  1:235483/1‑149 (MQ=255)
                                                                                 tttCATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACaa                                                                  <  2:71097/149‑1 (MQ=255)
                                                                                  ttcatagggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTCGCTCGcac                                                                    >  1:1068009‑M2/68‑149 (MQ=255)
                                                                                      tAGGGAGTCCTTTAGTTAAGCTGCCAGCCTTGTAAGGTTATGGGGTACCTGCGGCCTTACAACA‑‑‑ATA‑‑‑ACACACCGACAACATCACAGAAATGTACCTGGATCATAATGGAAACAAACAGGCTAAAAAATTTGAGCTGACTCGCACaaaa                                                                >  2:273495/1‑148 (MQ=255)
                                                                                         ggtgtcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCGGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCGGGCGCGCACAAACAAg                                                             >  2:130422‑M2/61‑149 (MQ=255)
                                                                                           tgtCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAACGTTTTAGCTGGCTCGCACAAACCAGCACtt                                                        >  1:21824/1‑149 (MQ=255)
                                                                                           tgtCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGATTAAAAGGGTTGGGCTGGCTCGACGAAACCAGCACtt                                                        >  2:733836/1‑149 (MQ=255)
                                                                                             tcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaacatA‑‑‑ATA‑‑‑ACACACAGACAACATCACAGAAACGTACCCGGATCATAATTGAAACAAAAAGCTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCCCt                                                         >  2:108574‑M2/57‑149 (MQ=255)
                                                                                             tcctttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGGTTGAGCTGACTCGAACAAACCAGCACt                                                         >  1:50286‑M2/57‑149 (MQ=255)
                                                                                               ctttagtaaaaccacatgtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAACTGAAACTAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACttt                                                       <  2:1129182‑M2/95‑1 (MQ=255)
                                                                                                tttagtaaaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACtttt                                                      <  2:937349‑M2/96‑1 (MQ=255)
                                                                                                       aaaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGtt                                               <  2:510888‑M2/103‑1 (MQ=255)
                                                                                                        aaccacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGttt                                              >  2:901746‑M2/46‑149 (MQ=255)
                                                                                                         accacaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACATAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAAACAGCACTTTTTAAAGtttt                                             >  1:161046‑M2/45‑149 (MQ=255)
                                                                                                            acaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAATCCATCACTTTTTAAACTTTTGTa                                          <  2:842177‑M2/108‑1 (MQ=255)
                                                                                                            acaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCCCACAACCCAGCACTTTTTAAAGTTATGTa                                          >  1:1077722‑M2/42‑149 (MQ=255)
                                                                                                            acaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAATTTGCGCTGGCTCGCACACACCAACACTTTTTAAAGTTTTTTa                                          >  2:606356‑M2/42‑149 (MQ=255)
                                                                                                            acaggtcttgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑AAACCCAGACAACATCAAAGAAATGTACCTGGATCATAATTGAAACAAAAAGGGTAAAAAGTTTGAGCTGGCTCGCCCAAACCAACACTTTTTAAAGTTTTGTa                                          >  1:334740‑M2/42‑149 (MQ=255)
                                                                                                                   ttgtaaggttatggggcacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGtt                                   <  1:264187‑M2/115‑1 (MQ=255)
                                                                                                                   ttgtaaggttagggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAATAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGtt                                   <  2:759119‑M2/115‑1 (MQ=255)
                                                                                                                    tgtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGttt                                  <  1:986361‑M2/116‑1 (MQ=255)
                                                                                                                    tGTAGGGTTATGGGGTATCTGCGGCCTT‑‑AAAATGATA‑‑‑ACACCCAGACAACATCACGGAACTGTACCTGGATCATAATTGAAACAAAAAGGTTGAGAGGTTTGAGCTGGTTGGCGCGAACCAGCAGTTTTTAAGGTTTTggttttagctt                                  >  2:84187/1‑139 (MQ=255)
                                                                                                                     gtaaggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTATTGTAATCGGTTTg                                 >  2:182609‑M2/33‑149 (MQ=255)
                                                                                                                     gtaaggttacggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTg                                 <  1:29612‑M2/117‑1 (MQ=255)
                                                                                                                       aaggtgatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTggg                               <  2:68491‑M2/119‑1 (MQ=255)
                                                                                                                         ggttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAGAAGTTTGAGCTGGCTCGCACAAACAAGCACTTTTAAAAGTTTTGTAATCAGTTGGGGGt                             >  1:644698‑M2/29‑149 (MQ=255)
                                                                                                                          gttatggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTCAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTa                            <  1:1220959‑M2/122‑1 (MQ=255)
                                                                                                                             atggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGATCGCACAAACCAGCACTTTTTAAAGTTTTGTAATAGGTTGGGGGTGGCt                         >  2:670968‑M2/25‑149 (MQ=255)
                                                                                                                              tggggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACACCATCCCAGAAACGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTCAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTa                        <  2:440067‑M2/126‑1 (MQ=255)
                                                                                                                                gggtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTGATACGTTTGGGGTAGCTACt                      >  1:280413‑M2/22‑149 (MQ=255)
                                                                                                                                  gtacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTATTGTAATAAGTTTGGGGTAGGTACgtt                    >  1:939519‑M2/20‑149 (MQ=255)
                                                                                                                                   tacctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATAACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCCCTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACtttt                   <  1:568281‑M2/131‑1 (MQ=255)
                                                                                                                                      ctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATTAGTTTGGTGTAGCTACTTttctt                >  2:980434‑M2/16‑149 (MQ=255)
                                                                                                                                      ctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCtactttactt                >  1:210066‑M2/16‑149 (MQ=255)
                                                                                                                                      ctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttctt                <  1:770146‑M2/134‑1 (MQ=255)
                                                                                                                                      ctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGATTTGTAATCAGTTTGGGGTAGCTACTTatctt                >  1:1039783‑M2/16‑149 (MQ=255)
                                                                                                                                      ctgcggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTCTTAAAAGTTTTGTAATCAGTTTGGGGAAGCTACTTttctt                >  2:95018‑M2/16‑149 (MQ=255)
                                                                                                                                      ctgcggcattaaaatA‑‑‑ATA‑‑‑ACACGCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTCGCTCCTcttctt                <  2:1197622‑M2/134‑1 (MQ=255)
                                                                                                                                        gCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGCAATGTTCTTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAgg           >  2:1134842/1‑149 (MQ=255)
                                                                                                                                         cggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAACTGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCa             <  1:1154983‑M2/137‑1 (MQ=255)
                                                                                                                                         cggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAACCCAGCACTTTTTAAAGTTTGGTAATCAGTTTGGGGTAGCTACTTTTCTTCCa             >  1:604522‑M2/13‑149 (MQ=255)
                                                                                                                                         cggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACttttcttcaa             <  1:363793‑M2/137‑3 (MQ=255)
                                                                                                                                          ggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAg            <  2:427115‑M2/138‑1 (MQ=255)
                                                                                                                                          ggccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAg            <  2:105435‑M2/138‑1 (MQ=255)
                                                                                                                                            ccttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGt          >  2:230451‑M2/10‑149 (MQ=255)
                                                                                                                                             cttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTGCTTTTCTTCCAGGTa         >  1:717897‑M2/9‑149 (MQ=255)
                                                                                                                                              ttaaaatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTATGGGGTAGCTACTTTTCTTCCAGGTaa        >  2:1105820‑M2/8‑149 (MQ=255)
                                                                                                                                                  aata‑‑‑aTA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATAATAATCGAACCAAAAACGATAAAACGTTTGAGATGGCCAGAACAAACAAGCAAGTATTAATGGGTATGATCCCGCTGGGAGTAGCAACTCTTCTTCCAGGTAActct    >  2:601498/4‑149 (MQ=255)
                                                                                                                                                  aatA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAActct    >  1:866289‑M2/4‑149 (MQ=255)
                                                                                                                                                    tA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGCTAGCTACTTTTCTTCCAGGTAActctct  <  1:745573‑M2/148‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                         
TTCAGGATAGAAATGGCCAAGGAGAATACCAATGGCTATCGCTGTCAGGACCTGAAAGTAAAGGCTTTTAAACAGAGAGGTTTTCATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTT‑‑AAA‑‑‑ATA‑‑‑ACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCT  >  CP009273/3676721‑3677014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.