| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,030,824 | C→T | 31.1% | E214E (GAG→GAA) | recJ ← | ssDNA exonuclease, 5' ‑‑> 3'‑specific |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,030,824 | 0 | C | T | 31.1% | 99.6 / 53.4 | 81 | E214E (GAG→GAA) | recJ | ssDNA exonuclease, 5' ‑‑> 3'‑specific |
| Reads supporting (aligned to +/- strand): ref base C (26/29); new base T (9/16); total (36/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
TCCCCGGACGGCACTTTCCGGCTCGGATGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGCTGCGGGTAATGTGTCG > CP009273/3030676‑3030971 | tCCCCGGACGGCACTTTCCGGCTCGGATGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGc < 1:624489/149‑1 (MQ=255)cccccGGACGGCACCTCCCGGCTCGGATGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGc < 1:121706/148‑1 (MQ=255) cccGGACGGCACTTTCCGGCTCGGATGCGACTCATCCCCTGCCAGGTCAGACTGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTTCGATGTTACGCta > 2:239272/1‑148 (MQ=255) cccGGACGGCACTTTCCGGCTCGAACGCGAGTCACCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCTCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCtc < 2:808538/149‑1 (MQ=255) aCGGCACTTTCCGGCTCGGATGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCaa < 2:221630/149‑1 (MQ=255) aCGGCACTTTCCGGCTCGGATGCGACCCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCaa < 1:478560/149‑1 (MQ=255) cACTTCCCGGCTCGGAGGCGACCCACCCCCTGCCAGGTCAGACTGCGATTTTTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCa < 2:983792/149‑1 (MQ=255) gccttCCGGCTCGGAGGCGACTCATCCCCTGCCAGGCCAGAATGCGATTATTAGCGTCCAGCGGCACGACGGCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAg < 1:976401/146‑1 (MQ=255) cTTTCCGGCTCGGATGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGc < 1:576830/149‑1 (MQ=255) tCGGATGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGCTcgc > 1:198331/1‑149 (MQ=255) cGGATGCGACTCGTCCCCTGCCCGGTCAGAATGCGTTTACTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATcgcg < 2:870187/149‑1 (MQ=255) cGGATGCGACTCATCTCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGGCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATcgcg < 1:870014/149‑1 (MQ=255) tGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCaaa > 1:526118/1‑149 (MQ=255) gCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCaaaa > 1:457122/1‑149 (MQ=255) cGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGAAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCaaaaa > 1:836565/1‑149 (MQ=255) gACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAg < 1:1228790/149‑1 (MQ=255) caCTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAg < 1:671781/148‑1 (MQ=255) cTCATCCCCTGCCAGGTCAGACTGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGt < 1:948141/149‑1 (MQ=255) cATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCGAGCGGCACGAAGTCGGCGGCTGTCCCGAGCGCGACCAGATCGAGCGGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCGGACCTGATCGCGCACAAAGGTgc > 2:606017/1‑149 (MQ=255) cATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTGCGTTCATCTAACCATCCCTGATCGCGCAAAAAGGTgg > 2:199141/1‑148 (MQ=255) cATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGGTCATCAAACCAGCCCTGATCGCGCCAAAAGCTgc > 2:390156/1‑149 (MQ=255) agccccTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTgcg < 1:1062909/147‑1 (MQ=255) aTCCCCTGCCAGGTCAGAATGCGATTCTTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTgcg < 1:1064096/149‑1 (MQ=255) aTCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTgcg < 1:412466/149‑1 (MQ=255) cTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAAGGGCCCAgcg > 1:1016747/1‑149 (MQ=255) tGCCAGGTCAGCGTGGGATTATTCGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAgcgc < 2:999927/149‑1 (MQ=255) ccAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGCTGTTACGCTCATCAAACCAGCCCTGAGAGCGCAAAAAGGCGCGGCGCGccc > 2:1085421/1‑148 (MQ=255) ccAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCa < 2:605345/149‑1 (MQ=255) ccAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCa > 2:337602/1‑149 (MQ=255) cAGGTCAGAATGCGATTCTTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGATCAACAAGGGTACTCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAg < 1:853644/149‑1 (MQ=255) cAGGTCAGAATGCGATTATCAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAg < 1:335910/149‑1 (MQ=255) aGGTCAGAATGCGCTTATTAGTGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATACAGCAGTCCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGc < 2:328909/149‑1 (MQ=255) gTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACGAGCCCTGATCCGGCAAAAAGGTGCGCGGCGCCAGCAt > 2:767985/1‑149 (MQ=255) cAGAATGCGATTATTAGCTTCCCGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCa < 2:178660/149‑1 (MQ=255) aaTGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGAt < 1:839667/149‑1 (MQ=255) gCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATaaa < 1:441090/149‑1 (MQ=255) gCGATTATTACCGCCCAGCGGCACGACGTCCCCCACTGTCCCCAGTGCAACCAGATCCAGGAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCTTTGATTGCGCAATAATGTGCGCAGCGCCAGCATCAGATaaa < 2:358324/149‑1 (MQ=255) cGATTATTAGCGTCCAGCGGCCCGACGTCCGCCACTGTCCCCAGCGCGACCAGCTCCCGCCGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCTCAAAAAGGTGCGCAGCGCCAGCATCAGATaaaa < 1:422779/149‑1 (MQ=255) cGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATaaaa < 2:825968/149‑1 (MQ=255) attatgAGCGTCCAGCGGCACGACGTCCGCGACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGCTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCAAAAAACAAAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACg < 2:94883/149‑1 (MQ=255) tattaGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCCGTTCTGCCAGGTTAGGAATTGCGATGTTACACTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGAAGCGCAAGCATCACATGAAACGcc > 2:1020982/1‑149 (MQ=255) tattaGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGcc > 2:447780/1‑149 (MQ=255) attaGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCca < 1:782137/149‑1 (MQ=255) cGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAAGGCCACAccc > 2:296946/1‑149 (MQ=255) gTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCa > 1:502938/1‑149 (MQ=255) tCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATAACGATGTTACGCTCATCAAACCAGCCCTGATCGCGAAAAACAGTGAGCAGCGCCAGCATCCGATACAACGCCACAccccc > 2:34643/1‑147 (MQ=255) tCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTATGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATAGCGCAAAAAGGGCCGCAGCGCCAGCATCCGATAAAACGCCACACCAAc > 2:706430/1‑149 (MQ=255) ccAGCGGCACGACGTCCGCCACTGCCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACg < 1:713408/149‑1 (MQ=255) cAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCGGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGc < 2:640022/149‑1 (MQ=255) cAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGc < 2:300764/149‑1 (MQ=255) cAGCCGCACGACGTCCCCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGc < 2:355900/149‑1 (MQ=255) cgacgTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCCGATACAACGCCACACCCACGCCTGCCAga > 1:381179/1‑148 (MQ=255) tCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGAttt < 1:823897/149‑1 (MQ=255) gCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGa > 1:108872/1‑149 (MQ=255) gCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAGCGCCACACCCACGCCTGCCAGTGATTTCGa > 1:279314/1‑149 (MQ=255) cTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCTACGCCTGCCAGTGATTTCGACggg < 1:920536/149‑1 (MQ=255) tGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTCACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGa > 2:390832/1‑149 (MQ=255) ccccAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAAt < 2:507288/149‑1 (MQ=255) ccAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGGCACGGATTTCGACGGCAAATTa > 1:271369/1‑149 (MQ=255) cAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTAc < 1:1007597/149‑1 (MQ=255) cAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACACTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTAc < 1:471135/149‑1 (MQ=255) atcgcgACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGAGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACa < 1:161714/147‑1 (MQ=255) gcgACCAGATCCAGCAGTTCTGCCAGGTTTGGGATTGTGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTc < 1:955758/149‑1 (MQ=255) gcgACCAGATCCAGCAGTTCCGCCATGTTAGGAATTGCGATGCTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCCCTCCTGCCAGTGATTTCGACGGGAAATTACAGTc < 2:1007208/149‑1 (MQ=255) gACCAGAGCCAGCAGTTCGGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTcgc < 1:3274/149‑1 (MQ=255) aGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGCTCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAGTTACAGTCGCGCaa > 1:105646/1‑149 (MQ=255) aGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCaa > 1:1217289/1‑149 (MQ=255) gATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAg > 2:115854/1‑149 (MQ=255) aTCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGt > 1:396077/1‑149 (MQ=255) gTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTa > 1:338284/1‑149 (MQ=255) ttCTGCCAGGTTAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTAGACGAGCAAATACAGgcgcgctcggcttctaacg > 1:257477/1‑136 (MQ=255) tgcagCCAGGTTAAGAATTGCGATGTTACGTCCAACAAACCAGCCCTCATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTaa < 1:220625/145‑1 (MQ=255) ttAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCACGTTAGGGTTAATGATTGCtca > 2:1112666/1‑147 (MQ=255) ttAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTc > 2:1236417/1‑149 (MQ=255) tAGGAATTGCGATGTTACGTTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTcc > 1:252538/1‑149 (MQ=255) ggAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGc > 1:959533/1‑149 (MQ=255) ggAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATATCGACGGGAAATTACAGTCGCGCAAGTTAAGGTTAATGATCGCTTCCGc > 1:520636/1‑149 (MQ=255) tGCTATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGCTGCgg < 1:233390/149‑1 (MQ=255) tGCGATGTTCCGCTCATCAAACCCGCCCGGATCGCGCAAAAAGGCGCGGAGCGCCAGCATCAGATAAAACGCCACCGCCACGCCTGCGAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGCTGCgg < 2:346637/149‑1 (MQ=255) tGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGCTGCgg < 2:995683/149‑1 (MQ=255) tGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTACATCCGCCGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGCTGCgg < 1:659350/149‑1 (MQ=255) tGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCACAGCACAACCATCAGATAAGACGCCACCCCCACGCAAGCCAGTTATTTCGACGGGCACTTACACTAGCGCGAGGTAGGGCTAGTGAACGCTTCCGCTGAGGGCAAt > 2:345934/1‑149 (MQ=255) gCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGCTGCGGGTAATGTGTCg > 1:888058/1‑149 (MQ=255) | TCCCCGGACGGCACTTTCCGGCTCGGATGCGACTCATCCCCTGCCAGGTCAGAATGCGATTATTAGCGTCCAGCGGCACGACGTCCGCCACTGTCCCCAGCGCGACCAGATCCAGCAGTTCTGCCAGGTTAGGAATTGCGATGTTACGCTCATCAAACCAGCCCTGATCGCGCAAAAAGGTGCGCAGCGCCAGCATCAGATAAAACGCCACACCCACGCCTGCCAGTGATTTCGACGGGAAATTACAGTCGCGCAAGTTAGGGTTAATGATCGCTTCCGCTGCGGGTAATGTGTCG > CP009273/3030676‑3030971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |