| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,726,790 | T→A | 5.4% | N410K (AAT→AAA) | xylG → | fused D‑xylose transporter subunits of ABC superfamily: ATP‑binding components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,726,790 | 0 | T | A | 5.4% | 455.9 / 2.6 | 160 | N410K (AAT→AAA) | xylG | fused D‑xylose transporter subunits of ABC superfamily: ATP‑binding components |
| Reads supporting (aligned to +/- strand): ref base T (75/73); new base A (2/8); total (77/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.93e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 163 total aligned reads displayed.
TTACCCTCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATTGCCGTTATT > CP009273/3726642‑3726937 | ttACCCTCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAAt > 2:758596/1‑149 (MQ=255)tgaccgctgcctcACGCAATACATTTACCGGTGGCATGAGCCAGCTGGATGACGCGGCAGAGCAAAAATGTATTTTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAAt < 2:855983/141‑1 (MQ=255) tCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAACGTTAAAACGTCGTCCCCCGACCTTACTATAGAACGCTTGAGCGTCGGCACTCAGCaa > 2:556956/1‑149 (MQ=255) cgccgcACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCaaa < 1:188740/149‑1 (MQ=255) ccgcACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCaaaaa > 2:481590/1‑149 (MQ=255) ccgcACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCaaaaa > 2:387327/1‑149 (MQ=255) cgcACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGAACCTGACTGTTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCaaaagc < 1:1213361/149‑3 (MQ=255) cgcACTCAATAAATTTACCGGTGCCATTAGCACGCTTGATGGCACGGCAGATCAAAATTTTATTCTGTAATCAAGCCTTCAGCTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAg < 2:723278/149‑1 (MQ=255) gcACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGc < 1:351087/149‑1 (MQ=255) cACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAATACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCg < 1:722104/149‑1 (MQ=255) tCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATc < 1:488555/149‑1 (MQ=255) cAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATCGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATcc > 1:552066/1‑149 (MQ=255) aaTAAATGTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGGTCct > 2:699472/1‑149 (MQ=255) aaaTTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCctcgc > 2:906694/1‑149 (MQ=255) aaaTTGACCGGTGGCATTAGCCAGCTTGATGACGAGGCAGAGAAAAAATGTATTCTGGAATCAAACCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGAGAGAAAAAAAAAAAAGCGATCctcgc < 2:845047/149‑1 (MQ=255) aTTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCctcgctc > 1:983732/1‑149 (MQ=255) ccGGTGGCATTAGCCAACTTGATGACACGGCAGAGCAGAAATGTAATCTGGAATCAATCCCGCCAAACAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGCCGGCAAACAGCAAAAAGCGATCCCCGCACGctgt > 1:785897/1‑149 (MQ=255) ggTGGCATTCGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAACGCAATCctagccccccgtac > 2:1171003/1‑140 (MQ=255) tGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGctgtctgt > 1:817949/1‑149 (MQ=255) tcATTAGGCAGCTTGATGACGCGGCAGAGCAAAAATGTATGCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCTCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTa < 2:952142/148‑1 (MQ=255) gCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAACGCGATCCTCGCTCGCTGTCTGTTa < 2:1196440/149‑1 (MQ=255) ttAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTCTTACtt > 1:12612/1‑149 (MQ=255) tAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTa < 1:84197/149‑1 (MQ=255) gcgtgatgaCGCGTCAGAGCAAAAATGACTGCTGGAAACGAGAGAGACACGCAGAGATAAAACGTCGTCCCCCGACCTTTCTTTCGGGCGTTTGAGCGGCCGCAAACAGAAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCcgc < 2:379982/146‑1 (MQ=255) gCTTGATGACGCGGTAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCAGAAAAAAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCcgc < 2:434993/149‑1 (MQ=255) cTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCTCTCGCTGTCTGTTACTTAACCcgcg < 1:620625/149‑1 (MQ=255) tgaggaCGGGGCAGAGCAAAAATGCATTCGGGAATCAATCCAGCACCTCAAAGTTAAAACGTCGGCCCCCGACCTGGCTATGGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGca < 2:244509/149‑1 (MQ=255) atgaCGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAAACAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGcatt > 2:1122236/1‑149 (MQ=255) aagaCGCGGCAGAGCAAAAATGAATTCTGGAATCACTCCAGCAACTCACAGTTCAACCGTCGTCACCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAACGATCCTCGCTCGCTGTCTCGTACTTAACCCGCCcata > 2:159873/3‑148 (MQ=255) gaCGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAGCTCAAAGTTAAACCGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAGTCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCAGCGgattct > 1:204766/1‑149 (MQ=255) gcgGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGcattctcat > 1:1107709/1‑149 (MQ=255) gCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGcgttctccttct > 1:175856/1‑149 (MQ=255) gCAGAGCAAAAACGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAACGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGcattctcattct < 2:226272/149‑1 (MQ=255) agagCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTtg < 1:1109224/149‑1 (MQ=255) agagCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCAGTCTGTTACTTAACCCGCGCATTCCCATTCTtg < 1:906694/149‑1 (MQ=255) agagCAAAAATGTATTCTGGAATAACTCCACGCCGTAAAAGTTTAAGCTTCTTCACCCAACCTTACAATTTTACGTTGAAGCGTCTGCAATCATCAAAATGCTATCCTCTCTCTCTGTCTGTTACTTAACCCGCGCATTCTCATTCTtg < 2:1031353/149‑1 (MQ=255) agacCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGTCCTTGCTATTGGCCGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTtg < 1:1129985/149‑1 (MQ=255) gagCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTtga < 1:387327/149‑1 (MQ=255) cgCAAAAATGTATTCTGGAATCAATCCAGCACCCCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCAAAAAAAAACAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTtgat < 2:758127/148‑1 (MQ=255) agCAAAAATGTATTCTGGAATCAATCCAGCACCTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTtgat < 1:566503/149‑1 (MQ=255) cAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCGCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTtgatga > 2:1129614/1‑149 (MQ=255) aaaaaTGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTCGCCCGCGCATTCTCATTATTGAGGaa > 1:895133/1‑149 (MQ=255) aaaaTGCATTCTGGAATCAAGCTAGCAACTCAAAGTGAAAACGTCGTCCCGCGACCTTGCTATTGGACGTTTGAGCGGCGACAATAAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAAc < 2:652203/149‑1 (MQ=255) tgcaTTCGGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACccac < 2:725080/146‑1 (MQ=255) aTTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTGGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCCCATTCTCATCCTTGATGACCCCACCAg > 2:446575/1‑149 (MQ=255) ttCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATAAACCCACCAgg > 1:506855/1‑149 (MQ=255) tCTGGAATCAATCCAGCAACTCAAAGTTACAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAggg > 1:758310/1‑149 (MQ=255) tCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAggg < 2:1057033/149‑1 (MQ=255) tGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGt < 1:944155/149‑1 (MQ=255) tGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCCCATTCTTGATGAACCCACCAgggat > 2:305049/1‑147 (MQ=255) atcaatcCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTAGCTTTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCg > 1:901582/1‑149 (MQ=255) atcCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGatat > 1:362754/1‑149 (MQ=255) atcCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGatat < 1:580320/149‑1 (MQ=255) tcCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTACCGATAtt > 1:471849/1‑149 (MQ=255) ccAGCCGCTCAAAGTTAACAGGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTg < 2:738610/149‑1 (MQ=255) ccAGCATCTCAAATTTTTATCGTCGTCCCCCGGCCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTg < 1:149110/149‑1 (MQ=255) ccAGCAACTCAAAGTTAAACCGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTg < 2:936426/149‑1 (MQ=255) ccAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTg < 1:1188124/149‑1 (MQ=255) ccAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTg > 2:426150/1‑149 (MQ=255) cAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGAAATTgg > 1:508128/1‑149 (MQ=255) aGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCCGCAAAAAGCGATCCTCGCTCGCTATCTGTGACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGgc > 2:444553/1‑149 (MQ=255) tcAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGgcg < 2:293245/148‑1 (MQ=255) gCAACGCAAAGTGAAAACGTCGTCCCCCGACCTTGCGATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGAGCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGgcg < 2:1143564/149‑1 (MQ=255) cTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGaa > 2:655031/1‑149 (MQ=255) tCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGaaa > 2:1213375/1‑149 (MQ=255) tCAAAGGTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGGAATTAGCAAAAAGCGATCCTCACACGCTGTCTGTTACTTAACGCGCGCATTCACATTCTTGATGAACACACCAAGGGAAGCGATATTAGCACGaaa > 2:806116/1‑149 (MQ=255) gTTAAACCGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACga < 2:48966/149‑1 (MQ=255) gTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACga < 2:1205554/149‑1 (MQ=255) gTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACga < 2:830715/149‑1 (MQ=255) tAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACgaga < 1:731102/149‑1 (MQ=255) tAAAACGGCGCCCCCCGCCCTTGCGAGTGGACGGTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACgaga < 2:279696/149‑1 (MQ=255) aaaCGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATc < 1:124993/149‑1 (MQ=255) aaCGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGCTATTGGCGCGAAATACGAGATCt > 1:198840/1‑149 (MQ=255) cgtcgtCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTAc < 1:301361/149‑1 (MQ=255) gtcCCCCGACCTTGCTATTGGACGTTTGGGCGGCGGCAATCAGCAAAAAGCCATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAaat < 2:98831/149‑1 (MQ=255) gtcCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAaat < 1:560162/149‑1 (MQ=255) ccccGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACGCACCAGGGGTATCGATATTGGCGCGAAATACGAGATGTACAaattaa > 1:194378/1‑149 (MQ=255) ccccGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGCAATACGAGACCTACAaattaa > 2:599944/1‑149 (MQ=255) ccccGACCTTGCGATTGGACGTTTGAGCGGCGGCAATCAGTAAAAAGCGATCCTCGCTCGCTGTCTTTTACTTAACCCGCTCATTCTCATTCTTGATGAACCCACCTTTTTTATTGATGTTGCGGCGACATCCGAGATCTACAcattaa < 2:236042/149‑1 (MQ=255) ccgtGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCCCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAAcc < 1:310311/146‑1 (MQ=255) tGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAGAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAAc > 2:770308/1‑149 (MQ=255) tGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTCCAAATTACTTAACCaat > 2:866569/1‑148 (MQ=255) gCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGCTCCTCGCTCGCTGTCTGTTACTGAACCCTCTCGGTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATCCGAGATCTGCAAATTAATTAACCAACt > 2:876938/1‑149 (MQ=255) cTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCGGGGGTGTCGGTCTTGGCGCGAAATACGAGAACGGACAATTAATTAACCAACTc > 1:459793/1‑149 (MQ=255) ttGGCCGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTCTATGAACCCACTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACATTAATTAACCAACTCGTc < 2:453676/149‑1 (MQ=255) gACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACAACATCTTCcag > 1:975734/1‑149 (MQ=255) aCGTTTGAGCGTCGGCACTCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCcagc < 1:1177425/149‑1 (MQ=255) gTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAGATACGAGATCTACAAATTAATTAACCAACTCgacaagaaa > 1:698110/1‑141 (MQ=255) gTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCcagcag > 1:1021619/1‑149 (MQ=255) ttGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAggg > 2:432635/1‑149 (MQ=255) cggcggCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATTg > 2:1222279/1‑149 (MQ=255) cggcAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATGGCCg > 1:693682/1‑149 (MQ=255) ggcAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCGACAAATTAAATAACCAACTCATCaagcagaacaatgccgc > 1:335225/1‑138 (MQ=255) gcAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAGATACGAGATCTACAAATTGATAAACCAACTCGTCCAGCAGGATATTGACgat > 1:407247/1‑147 (MQ=255) gcAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACCCGTCCAGCAGGGTCTTGCCGtt > 1:248734/1‑149 (MQ=255) gcAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGGATCGATATTGGCGCGAAATACGAGAACTACAAATTAAGTAACCAACTCGCCCAGCCGGGTATTGCCGtt > 2:602047/1‑149 (MQ=255) gcAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGATACTTAACCCGCGCATTCTCGTCATTGATGACCCCTATATGGTTATCGATATTGGCGCGAAATACGAGAGCTTCAAATTAAGTAACCAACACGTCCAGCAGGGGATTGCCGtt > 2:200225/1‑149 (MQ=255) aaTCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATGCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTGCAGCTGGGTATTGCCGTTAt > 2:805469/1‑149 (MQ=255) aTCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTCCAAATTAATTAACCAACTCGCCCCGAAGGGTATTGCCGATagt > 1:105534/1‑147 (MQ=255) aTCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCTTCCAGCAGGGTATTGCCGTTAtt < 1:651654/149‑1 (MQ=255) | TTACCCTCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATTGCCGTTATT > CP009273/3726642‑3726937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |