New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4158269	73 (0.900)	5 (0.070)	5/276	11.4	7.5%	intergenic (+141/‑31)	rrsB/gltT	16S ribosomal RNA of rrnB operon/tRNA‑Glu
	?	CP009273	= 4158291	55 (0.730)					intergenic (+163/‑9)	rrsB/gltT	16S ribosomal RNA of rrnB operon/tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTC  >  CP009273/4158125‑4158416                                                                                                                                                 |                                                                                                                                                     cttaccttaAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCa                                                                                                                                                  >  2:191089/1‑149 (MQ=255)  ttaccttaAAAAAGCATACTTTGTAGTGCTCACACAGATTGTCTGAAAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCAc                                                                                                                                                 <  1:1179658/149‑1 (MQ=255)    accttaAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGc                                                                                                                                               >  1:203824/1‑149 (MQ=255)     ccttaAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCa                                                                                                                                              <  2:436099/149‑1 (MQ=40)       ttaAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAc                                                                                                                                            >  2:435906/1‑149 (MQ=255)       ttaAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAc                                                                                                                                            >  2:795038/1‑149 (MQ=255)       ttaAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGATTACGCGTTGGGAGTGAGGCTGAAGAGGCGACATCCTGGCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAc                                                                                                                                            >  1:1240332/1‑149 (MQ=14)        taAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcg                                                                                                                                           >  1:1124258/1‑149 (MQ=40)          aagaagCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAAcgcg                                                                                                                                         >  2:1020482/1‑149 (MQ=255)           agaagCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGt                                                                                                                                        <  2:213232/149‑1 (MQ=39)             aagCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTTAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGCCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGa                                                                                                                                      <  2:118887/149‑1 (MQ=255)             aagCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGa                                                                                                                                      <  1:368655/149‑1 (MQ=39)             aagCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGa                                                                                                                                      >  1:899230/1‑149 (MQ=40)              atcGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGAt                                                                                                                                     <  2:1320046/147‑1 (MQ=39)               gCGTACTTTGTAGTGCGCCCAGATAATGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGcgttgcgtgata                                                                                                                                    <  2:604546/149‑12 (MQ=14)                cGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATaa                                                                                                                                   <  1:512899/149‑1 (MQ=39)                 gTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGcgttgcgtgatatt                                                                                                                                  <  1:876149/149‑14 (MQ=255)                  tACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGc                                                                                                                                 >  2:1123246/1‑149 (MQ=255)                    ccttGTAGTGCTCACCCAGGTTGTCTGATAGAAAGTGAAAAGCTAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTACTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCTTGATAAGCaa                                                                                                                               <  2:689078/147‑1 (MQ=14)                    cTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATACGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACTAAAATATCACGCAACGCGTGATAAGCaa                                                                                                                               <  1:802014/149‑1 (MQ=255)                     tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAt                                                                                                                              >  1:555325/1‑149 (MQ=255)                     tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAt                                                                                                                              >  1:24274/1‑149 (MQ=255)                     tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAAt                                                                                                                              >  1:673693/1‑149 (MQ=255)                     tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTGTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAt                                                                                                                              >  2:1027089/1‑149 (MQ=255)                        gTAGTGCTCACACAGATGGTCTGAGAGAAAGGGAAAAGGAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAtttt                                                                                                                           <  2:1072910/149‑1 (MQ=255)                         tAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTc                                                                                                                          <  1:68044/149‑1 (MQ=39)                         tAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTAGGGAGTGAGACTGAAGAGAATAAGGCCGGTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATGGCACGCAACGCGTGATAAGCAATTTTc                                                                                                                          >  1:754862/1‑149 (MQ=14)                         tAGTGCCCACACAGTTTGTCTGATAGAAAGTGAAGAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTc                                                                                                                          <  2:754862/149‑1 (MQ=255)                          aGTGCTCACACAGATGGTCTGATAGAAAGGGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCg                                                                                                                         <  2:243966/149‑1 (MQ=255)                           gggCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCgt                                                                                                                        <  2:1167093/147‑1 (MQ=39)                           gTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGATGGGAGTGCGGCTGAAGAGAATAAGGCCGGTCGCTTTCTATTAATGAAAGCTCACCCTAAACGAACCTGTCCCGCAACGCGAGAGAAGcggtgggcgt                                                                                                                        >  2:700277/1‑140 (MQ=11)                           gTGCTCACACAGATTGTATGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCgt                                                                                                                        <  1:250740/149‑1 (MQ=255)                               tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTcc                                                                                                                    >  1:201924/1‑149 (MQ=38)                               tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTACGTGTcc                                                                                                                    >  1:240403/1‑149 (MQ=255)                                   acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTccccgt                                                                                                                >  1:530199/1‑147 (MQ=38)                                   acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTAACCCTACACGAAAGTATCACGCAACGCGGGATAAGCAATTTTCGTGCCCCCtt                                                                                                                >  2:518268/1‑149 (MQ=255)                                     aGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCACAGCGTGATAAGCAATTTTCGTGTCCCCTTCg                                                                                                              >  2:207903/1‑149 (MQ=255)                                      gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGt                                                                                                             <  1:446993/149‑1 (MQ=37)                                       aTTGTCTGATAGAAAGTGAAAAGCAAGTCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTc                                                                                                            <  1:548155/149‑1 (MQ=37)                                          gTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCtct                                                                                                         >  1:996889/1‑147 (MQ=39)                                           tgtGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                        <  2:465254/147‑1 (MQ=37)                                           tCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                        >  1:210634/1‑149 (MQ=38)                                           tCTGATAGAAAGTGAAAAGCAAGGCGTATACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTCTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                        <  1:924681/149‑1 (MQ=255)                                            ttGAGAGAATGGGCAAAGCAAGGCGTTTAGGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTagag                                                                                                       <  2:372653/148‑1 (MQ=11)                                            cTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGGAATTTTCGTGTCCACTTCGTCtcaag                                                                                                       >  1:568019/1‑145 (MQ=255)                                            cTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTagag                                                                                                       <  2:596549/149‑1 (MQ=37)                                             tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                      <  1:685272/149‑1 (MQ=37)                                             tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                      >  2:916798/1‑149 (MQ=37)                                             tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                      >  1:143229/1‑149 (MQ=38)                                             tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGCCTAGAgg                                                                                                      >  2:1167866/1‑149 (MQ=38)                                               aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGcc                                                                                                    >  1:671354/1‑149 (MQ=35)                                               aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAATTTTCGTGTCCCCTGCGACGAGAGGcc                                                                                                    >  1:684536/1‑149 (MQ=255)                                                tAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGccc                                                                                                   <  2:1255433/149‑1 (MQ=35)                                                 cgAAGGTGAACAGCAAGGCGTTTACGGGTTGGGAGTGAGGCTGAAGAGAATAAGGCCCTTCGCTTTCTATTACTGAAAGCTCACCCTACACGAAGTTATCCCGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                  <  2:875951/148‑1 (MQ=11)                                                 aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                  <  1:191089/149‑1 (MQ=33)                                                  gAAAGTGAAAAGCAAGGGGGTTACGCGTTGGGCGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                 <  2:745767/149‑1 (MQ=255)                                                  gAAAGTGAAAAGCAAGGCTTTGCCACGTGGGGAGCGATGCTTAAGAGAATAATGCCGTTCGCTTTCTATTAATGAATGCTGACCCTTCCCGAAACTATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                 <  2:17626/149‑1 (MQ=11)                                                  gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                 <  2:529750/149‑1 (MQ=32)                                                   aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAgg                                                                                                >  1:406364/1‑149 (MQ=32)                                                      gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGACTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGaca                                                                                             >  1:675229/1‑149 (MQ=17)                                                        gAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTGTCGTGTCCCCTTCGTCTAGAGGCCCAGGACAcc                                                                                           >  1:995744/1‑149 (MQ=17)                                                          aaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGc                                                                                         >  1:503216/1‑149 (MQ=31)                                                          aaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGATCACCCTACACGAAAATATCACGCAACGCGTGATAAGAAATTTTCGTGGCCCCTTCGTCTAGAGGCCCAGGACACCGc                                                                                         >  2:592819/1‑149 (MQ=9)                                                                 ggagTTTACTCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCa                                                                                  >  2:1148445/4‑149 (MQ=0)                                                                                                                                    cccgaaacGAAACTATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGa              <  1:829025/143‑1 (MQ=0)                                                                                                                                          acGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTaa        <  2:210634/149‑1 (MQ=32)                                                                                                                                          acGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTaa        >  1:815872/1‑149 (MQ=32)                                                                                                                                           cgcaaaTACCACGTAACGCGGGATAAGCAATGTTCGTGTCCGCTTCGTCGAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAat       <  1:1166126/146‑1 (MQ=11)                                                                                                                                            gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCCCTTG‑CTGGTTTGTGGTTGAAAGTCGCAGACCTTAata      >  1:691251/1‑149 (MQ=255)                                                                                                                                            gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCCCTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAata      >  2:1019725/1‑149 (MQ=17)                                                                                                                                            gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGGCGAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAata      >  2:320914/1‑149 (MQ=17)                                                                                                                                            gAAAATATCAAGCAACGCGTGATAAGAAATTTTCGTGTCCCCTTCGTCTAGAGTCCCAGGACACCGCCCTTTCACGCCGGTGACAGTGGTTCGACTCCTCAAGACGACGCCACTTGTCGGGTTTGAG‑GGCAAAGTCGccacccgtcata      >  2:805177/1‑139 (MQ=0)                                                                                                                                                ttatCACGCGTTGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCGACTTG‑CTGGGTTGTGAGTGAAAGTCGCCGACCTTAATAtctc  >  1:626284/2‑149 (MQ=11)                                                                                                                                                 |                                                                                                                                                     CTTACCTTAAAGAAGCGTACTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTC  >  CP009273/4158125‑4158416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.