New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4158269	73 (0.900)	5 (0.070)	5/276	11.4	7.5%	intergenic (+141/‑31)	rrsB/gltT	16S ribosomal RNA of rrnB operon/tRNA‑Glu
	?	CP009273	= 4158291	55 (0.730)					intergenic (+163/‑9)	rrsB/gltT	16S ribosomal RNA of rrnB operon/tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATG  >  CP009273/4158144‑4158437                                                                                                                                                    |                                                                                                                                                    ccttGTAGTGCTCACCCAGGTTGTCTGATAGAAAGTGAAAAGCTAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTACTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCTTGATAAGCaa                                                                                                                                                    <  2:689078/147‑1 (MQ=14) cTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATACGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACTAAAATATCACGCAACGCGTGATAAGCaa                                                                                                                                                    <  1:802014/149‑1 (MQ=255)  tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAt                                                                                                                                                   >  1:555325/1‑149 (MQ=255)  tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAt                                                                                                                                                   >  1:24274/1‑149 (MQ=255)  tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAAt                                                                                                                                                   >  1:673693/1‑149 (MQ=255)  tttGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTGTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAt                                                                                                                                                   >  2:1027089/1‑149 (MQ=255)     gTAGTGCTCACACAGATGGTCTGAGAGAAAGGGAAAAGGAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAAtttt                                                                                                                                                <  2:1072910/149‑1 (MQ=255)      tAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTc                                                                                                                                               <  1:68044/149‑1 (MQ=39)      tAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTAGGGAGTGAGACTGAAGAGAATAAGGCCGGTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATGGCACGCAACGCGTGATAAGCAATTTTc                                                                                                                                               >  1:754862/1‑149 (MQ=14)      tAGTGCCCACACAGTTTGTCTGATAGAAAGTGAAGAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTc                                                                                                                                               <  2:754862/149‑1 (MQ=255)       aGTGCTCACACAGATGGTCTGATAGAAAGGGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCg                                                                                                                                              <  2:243966/149‑1 (MQ=255)        gggCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCgt                                                                                                                                             <  2:1167093/147‑1 (MQ=39)        gTGCTCACACAGATTGTATGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCgt                                                                                                                                             <  1:250740/149‑1 (MQ=255)            tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTcc                                                                                                                                         >  1:201924/1‑149 (MQ=38)            tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTACGTGTcc                                                                                                                                         >  1:240403/1‑149 (MQ=255)                acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTccccgt                                                                                                                                     >  1:530199/1‑147 (MQ=38)                acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTAACCCTACACGAAAGTATCACGCAACGCGGGATAAGCAATTTTCGTGCCCCCtt                                                                                                                                     >  2:518268/1‑149 (MQ=255)                  aGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCACAGCGTGATAAGCAATTTTCGTGTCCCCTTCg                                                                                                                                   >  2:207903/1‑149 (MQ=255)                   gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGt                                                                                                                                  <  1:446993/149‑1 (MQ=37)                    aTTGTCTGATAGAAAGTGAAAAGCAAGTCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTc                                                                                                                                 <  1:548155/149‑1 (MQ=37)                       gTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCtct                                                                                                                              >  1:996889/1‑147 (MQ=39)                        tgtGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                             <  2:465254/147‑1 (MQ=37)                        tCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                             >  1:210634/1‑149 (MQ=38)                        tCTGATAGAAAGTGAAAAGCAAGGCGTATACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTCTTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTaga                                                                                                                             <  1:924681/149‑1 (MQ=255)                         ttGAGAGAATGGGCAAAGCAAGGCGTTTAGGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTagag                                                                                                                            <  2:372653/148‑1 (MQ=11)                         cTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGGAATTTTCGTGTCCACTTCGTCtcaag                                                                                                                            >  1:568019/1‑145 (MQ=255)                         cTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTagag                                                                                                                            <  2:596549/149‑1 (MQ=37)                          tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                                           >  2:916798/1‑149 (MQ=37)                          tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                                           <  1:685272/149‑1 (MQ=37)                          tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAgg                                                                                                                           >  1:143229/1‑149 (MQ=38)                          tGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGCCTAGAgg                                                                                                                           >  2:1167866/1‑149 (MQ=38)                            aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGcc                                                                                                                         >  1:671354/1‑149 (MQ=35)                            aTAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAATTTTCGTGTCCCCTGCGACGAGAGGcc                                                                                                                         >  1:684536/1‑149 (MQ=255)                             tAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGccc                                                                                                                        <  2:1255433/149‑1 (MQ=35)                              cgAAGGTGAACAGCAAGGCGTTTACGGGTTGGGAGTGAGGCTGAAGAGAATAAGGCCCTTCGCTTTCTATTACTGAAAGCTCACCCTACACGAAGTTATCCCGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                                       <  2:875951/148‑1 (MQ=11)                              aGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCa                                                                                                                       <  1:191089/149‑1 (MQ=33)                               gAAAGTGAAAAGCAAGGGGGTTACGCGTTGGGCGGGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                                      <  2:745767/149‑1 (MQ=255)                               gAAAGTGAAAAGCAAGGCTTTGCCACGTGGGGAGCGATGCTTAAGAGAATAATGCCGTTCGCTTTCTATTAATGAATGCTGACCCTTCCCGAAACTATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                                      <  2:17626/149‑1 (MQ=11)                               gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAg                                                                                                                      <  2:529750/149‑1 (MQ=32)                                aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAgg                                                                                                                     >  1:406364/1‑149 (MQ=32)                                   gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGACTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGaca                                                                                                                  >  1:675229/1‑149 (MQ=17)                                     gAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTGTCGTGTCCCCTTCGTCTAGAGGCCCAGGACAcc                                                                                                                >  1:995744/1‑149 (MQ=17)                                       aaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGc                                                                                                              >  1:503216/1‑149 (MQ=31)                                       aaaGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGATCACCCTACACGAAAATATCACGCAACGCGTGATAAGAAATTTTCGTGGCCCCTTCGTCTAGAGGCCCAGGACACCGc                                                                                                              >  2:592819/1‑149 (MQ=9)                                              ggagTTTACTCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGGGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCa                                                                                                       >  2:1148445/4‑149 (MQ=0)                                                                                                                 cccgaaacGAAACTATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGa                                   <  1:829025/143‑1 (MQ=0)                                                                                                                       acGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTaa                             >  1:815872/1‑149 (MQ=32)                                                                                                                       acGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTaa                             <  2:210634/149‑1 (MQ=32)                                                                                                                        cgcaaaTACCACGTAACGCGGGATAAGCAATGTTCGTGTCCGCTTCGTCGAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAat                            <  1:1166126/146‑1 (MQ=11)                                                                                                                         gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCCCTTG‑CTGGTTTGTGGTTGAAAGTCGCAGACCTTAata                           >  1:691251/1‑149 (MQ=255)                                                                                                                         gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCCCTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAata                           >  2:1019725/1‑149 (MQ=17)                                                                                                                         gAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGGCGAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAata                           >  2:320914/1‑149 (MQ=17)                                                                                                                         gAAAATATCAAGCAACGCGTGATAAGAAATTTTCGTGTCCCCTTCGTCTAGAGTCCCAGGACACCGCCCTTTCACGCCGGTGACAGTGGTTCGACTCCTCAAGACGACGCCACTTGTCGGGTTTGAG‑GGCAAAGTCGccacccgtcata                           >  2:805177/1‑139 (MQ=0)                                                                                                                            aattctaCGCAACGGGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtct                        <  2:995744/143‑1 (MQ=12)                                                                                                                             ttatCACGCGTTGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCGACTTG‑CTGGGTTGTGAGTGAAAGTCGCCGACCTTAATAtctc                       >  1:626284/2‑149 (MQ=11)                                                                                                                               atcacgcgttgcgTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaa                     >  1:770672/11‑149 (MQ=12)                                                                                                                               atCACGCAACGCGTGATAAGCAATTTTCGTGTGCGTGGTGGGTAGAGGCCCAGGACACCGCCCTTTCCCGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaa                     >  1:1311680/1‑149 (MQ=11)                                                                                                                                 gaCGCAACGCGTTATAAGCAATTTTCGTGTCCCCTGCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGGGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                   <  2:1178503/148‑1 (MQ=12)                                                                                                                                 cgcGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                   <  2:449607/147‑1 (MQ=17)                                                                                                                                 cACGCAACGGGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                   <  2:503216/149‑1 (MQ=17)                                                                                                                                 cACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCaaaa                   <  2:209938/149‑1 (MQ=32)                                                                                                                                  aCGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTCTGTGAGTGAAAGTCGCCGACCTTACTATCTCAAAAc                  >  2:1135754/1‑149 (MQ=17)                                                                                                                                       aCGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTGTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATc             >  2:1173548/1‑149 (MQ=25)                                                                                                                                            tGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCgg        >  1:1086944/1‑149 (MQ=40)                                                                                                                                              aTAAGCAATTTTCGTGTCCCTCTCGTCTAGAGGCCCAGGACACCTCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGt      <  1:452903/149‑1 (MQ=255)                                                                                                                                               tAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGCCAGTTCCTTACCTTAATATCTCAAAACTCATCTTCGGGTg     <  1:320914/149‑1 (MQ=14)                                                                                                                                                aaGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGACAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGa    >  1:1022094/1‑149 (MQ=255)                                                                                                                                                  gCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTCGGGGACGCCACTTG‑GGGGTACGGGAGAGAAAGTCCTCGCCCTTAATATCTCACAACTCCTCTTCGGGTgcag  >  2:173000/1‑146 (MQ=14)                                                                                                                                                    |                                                                                                                                                    CTTTGTAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTG‑CTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATG  >  CP009273/4158144‑4158437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.