| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4125140 | 424 (8.920) | 4 (0.100) | 3/88 | NT | 0.87% | coding (636/837 nt) | dam | DNA adenine methylase |
| ? | W3110S.gb | = 4125175 | 550 (13.460) | coding (671/837 nt) | dam | DNA adenine methylase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 148 total aligned reads displayed.
GTCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/4125065‑4125140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagatcAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA < W3110S.gb/4125175‑4125107 GTCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:2112335/1‑70 TCTGCGAGCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGA < 1:1982238/71‑1 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGG < 1:1825618/70‑1 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:411000/69‑1 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:63651/1‑69 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:624862/69‑1 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:2333328/1‑69 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:3087555/69‑1 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:3057804/69‑1 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:3000079/1‑69 TCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:458625/1‑69 TCTGCGACCG‑CAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGG < 1:3363287/69‑1 CTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:2374800/1‑68 TGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:2066851/1‑67 TGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:2758196/1‑67 TGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:1022076/1‑67 TGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:754175/1‑67 TGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:3535197/1‑67 TGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:4098648/1‑67 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTAGGCTTGAACAACAAGCGCATCTGGCGGAG < 1:4209770/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATC < 1:1252363/71‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGA < 1:689451/69‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:260682/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:2539262/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:427941/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:384055/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:3946843/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:2117673/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:963987/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:1422646/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:114264/68‑1 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:3508962/1‑65 CGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:52364/1‑65 GCCAACTTTACGGCGTATCACACAAACATTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:831684/63‑1 GCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:1399262/63‑1 CTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:297678/55‑1 TTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGG < 1:3264871/55‑1 TTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGG < 1:2219153/55‑1 TACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGA > 1:1854083/1‑56 ACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGA > 1:20349/1‑55 GGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:3763605/52‑1 TATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:2181764/48‑1 TATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:3548543/45‑1 TCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGA < 1:2181136/47‑1 TCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:1563070/46‑1 TCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:2457136/46‑1 TCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:1475809/46‑1 TCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAG < 1:3231030/46‑1 CACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:458753/42‑1 ACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGG > 1:1863120/1‑42 CACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGG < 1:134935/41‑1 CACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:2021114/40‑1 CACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG > 1:2784038/1‑40 CACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:1134873/40‑1 ACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCG < 1:2200305/39‑1 CAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGA > 1:35727/1‑38 TTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGC > 1:4325482/1‑71 TTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGC > 1:148271/1‑71 AAGCGCATCTGGCGGAGATCAGCACTGGAATATGGCGCTCAACCA > 1:2626373/1‑45 TCTGGCGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCG < 1:4031982/49‑1 gctGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAA < 1:4393811/68‑1 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCA < 1:1508669/70‑1 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTC > 1:3247001/1‑69 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTC > 1:2835099/1‑69 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTC > 1:3152271/1‑69 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTC > 1:1801605/1‑69 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTC > 1:53335/1‑69 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTG < 1:2017917/63‑1 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTG < 1:4235802/63‑1 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCT > 1:4253198/1‑61 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCC‑CCAGATGCGCTTGTTGTTCAA < 1:2553430/70‑1 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGAT > 1:1595206/1‑45 GGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGAT > 1:1929512/1‑45 GGAGATCAGCACTGGAATATGCCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTC > 1:670611/1‑69 GAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTTTTCAA < 1:3140756/70‑1 GAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAG > 1:2552489/1‑71 GAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAA < 1:174843/70‑1 GAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAA < 1:169622/70‑1 GAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCA > 1:2668493/1‑52 AGATCAGCACTGGAATATGGCGCTCAACCAGCCCTTCGGCGCTCTCCGCCAGATGCGCTTGTTG > 1:2827112/1‑64 AGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGC > 1:2858713/1‑71 AGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGC > 1:1941590/1‑71 AGATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTT > 1:348919/1‑63 GATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCG < 1:921045/71‑1 GATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCG < 1:3454873/71‑1 GATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCG < 1:2910964/71‑1 GATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCG > 1:2792202/1‑71 GATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCG < 1:1715403/71‑1 ATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAA < 1:2297359/67‑1 ATCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCT < 1:3722103/57‑1 TCAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGT > 1:4097634/1‑70 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA > 1:1048674/1‑70 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA > 1:1110605/1‑70 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA > 1:1500504/1‑70 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA > 1:1662529/1‑70 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA > 1:2927991/1‑70 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA > 1:3694373/1‑70 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGC > 1:3749839/1‑54 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGA > 1:2538244/1‑49 CAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCAAGATGCGCTTGTTGTTCAAGCGTA > 1:4305501/1‑70 GTCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/4125065‑4125140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagatcAGCACTGGAATATGGCGCTCAACCAGACCTTCGGCGATCTCCGCCAGATGCGCTTGTTGTTCAAGCGTA < W3110S.gb/4125175‑4125107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |