Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3633402	3634358	957	35 [33]	[33] 34	yhiL	pseudogene, DUF4049 family protein

GTATTGCTTCGGATTAGATGGAATAGAGGATCATCCATGTGTTCTTTATGTTTTTTATTAAAAATATTGGCTAATTCCTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTC  >  NC_000913/3633123‑3633633                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                         gTATTGCTTCGGATTAGATGGAATAGAGGATCATCCATGTGTTCTTTATGTTTTTTATTAAAAATATTGGCTAATTCCTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGtt                                                                                                                                                                                                                                      >  1:312530/1‑283 (MQ=255)                                            cTTTATGTTTTTTATTAAAAATATTGGCTAATTCCTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCAAGCCAGAAAGACGACATTTTTATTAATACGGCtt                                                                                                                                                                         >  1:377217/1‑300 (MQ=255)                                                                  atTGGCTAATTCCTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGtt                                                                                                                                                                                                                                      <  2:312522/218‑1 (MQ=255)                                                                             ccTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTTGTCGTGCAGTATAGTTa                                                                                                                                                                                                                                     >  2:522659/1‑208 (MQ=255)                                                                             ccTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTa                                                                                                                                                                                                                                     <  2:170843/208‑1 (MQ=255)                                                                             ccTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTa                                                                                                                                                                                                                                     <  1:522672/208‑1 (MQ=255)                                                                             ccTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTa                                                                                                                                                                                                                                     >  1:170848/1‑208 (MQ=255)                                                                                             aTTTTTCATCTGAGTAAATTGAACCTGCAAAGCAACGAGACAATAATATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGGGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATGTCGCATAGAATTTAGCAAAGTAAGGat                                                                                                                          <  1:598032/299‑1 (MQ=255)                                                                                              tttttCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTcca                                                                                                                                                                                                          >  2:201130/1‑218 (MQ=255)                                                                                                        gATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAacgn                                                                                                                                                                                                >  2:494609/1‑217 (MQ=255)                                                                                                        gATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCatat                                                                                                                                                      <  1:494621/260‑1 (MQ=255)                                                                                                                            gCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAAt                                                                                                                                                                                                                           <  1:272049/171‑1 (MQ=255)                                                                                                                            gCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAAt                                                                                                                                                                                                                           >  2:272041/1‑171 (MQ=255)                                                                                                                                         aaCATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTAc                                                                                                                                                               <  2:122859/218‑1 (MQ=255)                                                                                                                                           cATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATccc                                                                           >  1:338174/1‑300 (MQ=255)                                                                                                                                                         tctcTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTc                                                                                                                                                   >  2:259603/1‑214 (MQ=255)                                                                                                                                                         tctcTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTc                                                                                                                                                   <  1:259611/214‑1 (MQ=255)                                                                                                                                                            ctTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGtat                                                                                                                                                                                                                                          >  1:553302/1‑124 (MQ=255)                                                                                                                                                            ctTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGtat                                                                                                                                                                                                                                          <  2:553288/124‑1 (MQ=255)                                                                                                                                                             ttattaTTCCGTGATGACTGGTTAAAACTTGCCTTTATGAGTCATAATTACAAACATCGAGCGTTTTACTTAAGTTATACGTATCACCGGCAGCGAGTTCATGCTTTGCTAGTCGTGCAGTATATTAACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATGTTTATTAATACGGCTATCTTTATTACCTTCCATATTTAGCATAGaa                                                                                                                                           >  2:218939/1‑218 (MQ=255)                                                                                                                                                             ttattaATCCATGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTATTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCAt                                                                                                                                               <  2:681031/214‑1 (MQ=255)                                                                                                                                                                  attCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCg                                                   <  1:201135/301‑1 (MQ=255)                                                                                                                                                                      cGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCAt                                                >  1:222791/1‑300 (MQ=255)                                                                                                                                                                               tGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGata                                                                                                                         <  2:377210/218‑1 (MQ=255)                                                                                                                                                                                                         tAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTATCATTAAACTTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTAc                                                                                                                                                               >  2:550135/1‑154 (MQ=255)                                                                                                                                                                                                         tAAGTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTAc                                                                                                                                                               <  1:550149/154‑1 (MQ=255)                                                                                                                                                                                                                                                             gTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAAt                                                                                                                                          >  1:30847/1‑123 (MQ=255)                                                                                                                                                                                                                                                             gTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAAt                                                                                                                                          <  2:30846/123‑1 (MQ=255)                                                                                                                                                                                                                                                                                    gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTttatt                                                                                                                                                                 >  2:594121/1‑77 (MQ=255)                                                                                                                                                                                                                                                                                    gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTttatt                                                                                                                                                                 <  1:594139/77‑1 (MQ=255)                                                                                                                                                                                                                                                                                    gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTc                                                                                                                                                   <  2:239469/91‑1 (MQ=255)                                                                                                                                                                                                                                                                                    gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTc                                                                                                                                                   >  1:239476/1‑91 (MQ=255)                                                                                                                                                                                                                                                                                    gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAAt                                                                                                        >  2:114963/1‑134 (MQ=255)                                                                                                                                                                                                                                                                                    gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAAt                                                                                                        <  1:114967/134‑1 (MQ=255)                                                                                                                                                                                                                                                                                    gTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGtc  >  1:74417/1‑236 (MQ=255)                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                         GTATTGCTTCGGATTAGATGGAATAGAGGATCATCCATGTGTTCTTTATGTTTTTTATTAAAAATATTGGCTAATTCCTCAGGATCAGTAGGATTTTTCATCTGATTAAATGGAACCTGCAAAGCACCGAGACAATAACATTTTTTTCTTCATCTCTTATTATTCCGTGATGACTGGTTAAAACTTGCCTTTCTGAGTCATAATTACAAACATCGAGCGTTTTAATTAAGTTATACGTATCACCGGCAGAGAGTTTATGATTTGCTAGTCGTGCAGTATAGTTACCATTAAAATTGATTTCATGATTTCCAGCCAGAACGACGACATTTTTATTAATACGGCTATCTTTATTACCCTCCATATTTCGCATAGAATTTAGCAAAGTAAGGATATATTTATCACCAAAAATAGTACTAAATCTATCGCCTGTATGATCCCCAAGGAAGATACAAGGGGTTATCGCATCGTCCTTTAAAAAAACATGTTGATGCAACTCATTCAAGATCATGTC  >  NC_000913/3633123‑3633633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑