| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB122 | 3,365,238 | 0 | G | C | 20.4% | 192.4 / 10.0 | 89 | intergenic (‑109/‑10) | csoR/CJ019_03165 | Copper‑sensing transcriptional repressor CsoR/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (46/24); new base C (1/17); total (47/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.92e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTCAGCCAGTCGGGAGTGG > ACB122/3365102‑3365366 | gCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAg > 6:146576/1‑137 (MQ=255) gcggtgtTGGTGTGCGCTCATGCATTTCGTCTCATGCTTCGATTAATTCCGCTCGAATCCTATCCCCGTGGGGGGTTTTTGGTCAAACCAACTCCCCCTTCAGAACAACCATCCGTTTTGGAATCAAAACAAACACg < 4:211101/134‑1 (MQ=255) gCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAacacc > 1:152185/1‑136 (MQ=255) gCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAacacc > 2:317133/1‑136 (MQ=255) gCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACg > 6:138955/1‑137 (MQ=255) gCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACg > 6:274146/1‑137 (MQ=255) gtTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATg > 4:142074/1‑137 (MQ=255) tCGTGATCGCTCATGCCTTGAGTCTCATGCATCGAAGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTAACCCTTCAAAACAACAATACGCTTAGGCATCAAAAGAAACACGACATGCt > 4:60028/1‑137 (MQ=255) cGCTCATGCCTTGAGTCTCATGCATCGATGAATTAAGCTCTCATCCTATCACCCTGGGGGGGATATGGTCAAACCAACTACACCTTCAGAACCACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAAc > 2:329755/1‑137 (MQ=255) ctctTGCTTTGTTTCTAATGAATCGTTTAATTACGATCGCAACATATCCCCCTGGGGGTTATATGGTCAAACCAACTACCCCTTCATAACAACCATCCGCTTCGGCATCAAAAGAAACACGACATGCTCAGCAAccc < 2:48779/137‑1 (MQ=255) atCATGCCTTGAGTCTCATGCATCGATTAATTACGCTCGCATCCAATCCCCCTGGGGGGTATATGGTCAAACCAACTACCCCTTCATAACAACCATCCGCTTAGGCATAAAACCAAACACGACATGCTCAGCAAccc < 5:233608/136‑1 (MQ=255) tGCCTTGAGTCTCATGCATCGATGAATTACGCGCGCAACCTATCCCCCGGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAACCACGACATGCTCAGCAACCCCATc < 7:39060/137‑1 (MQ=255) gCCTTGAGTCTCATGCATGGATGAATTACGCTCGCAGCCTATCCCCCGGGGGGGGATATGGTCAAACCAACTACCCCTTCAGACCAACCATCCGCTTAGGCAGCAAAAGAACCACGACATGCTCAGCAACCCCATCa < 6:263980/137‑1 (MQ=255) gCCTTGAGTCTCATGCATCGATCAATTACGCTCGCATCCTATCCCCGTGGGGGTTATATGGTCAAACCAACTCCCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCa < 5:255630/137‑1 (MQ=255) gTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTaa > 6:30308/1‑137 (MQ=255) ctcATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAgg > 2:161062/1‑137 (MQ=255) ctcATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCATTCAGAACAAACATCCGCTTAGGCATCAAAACAAACACGACATGCTCAGCAACCCCATCACCACTAAgg > 6:115826/1‑137 (MQ=255) tGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGAt > 1:225774/1‑137 (MQ=255) tGCATCGATGAATAACGCGCGAATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACAACCCCTTCACAACAACCATCCGCTTAGCCATCAAAACAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGAt < 5:159589/137‑1 (MQ=255) tGCATCGATCATCTCCGCGCCCAGCCTATCCCCGGGGGGGGGATATGGCCACACCAACAACCCCTCCACAACAACCATCCGCTTCGGCAACAAAACAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGAt < 2:124647/137‑1 (MQ=255) gCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGAtt > 7:271051/1‑137 (MQ=255) cATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGATTAGGCATCAAAAGAAACACGACATGAGAAGCAACCCCATCAGCACTAAGGGGAttt > 8:105421/1‑137 (MQ=255) cATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATACGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGAttt > 8:206329/1‑137 (MQ=255) ctattaaTTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGACAAACCAACAACCCCTTCACAAAACCCACCCGCTTAGGCAACAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTg < 1:38623/132‑1 (MQ=255) ctaTGATTAACGCTCGCATCCTATCCCCTTGGGGGGTATTTGGTCAAACAAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTg < 8:13374/135‑1 (MQ=255) aTGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATAAGCACTAAGGTGATTTTTGcc > 6:227907/1‑137 (MQ=255) aaTTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCtt > 7:63244/1‑137 (MQ=255) aaTTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACAAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGAACTAAGGTGATTTTTGCCCtt > 1:142783/1‑137 (MQ=255) tACGCTCGCATCATATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCACAACAACCATCCGCTTAGGCATAAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGct < 3:276966/137‑1 (MQ=255) cccccacGCAACCAACCCCCTGGGGGGGGATAGGTTAAAACCAACAACCCCTCCACACCAACCAGCCTATACCTCAACAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGct < 2:277687/131‑1 (MQ=255) aaCGCTCGCATCCTACCCCCCTGGGGGGTATATGGTCAAACCAACACCCCCTTCAGAACAACCATCCGCTTCGGCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGct < 5:310308/136‑1 (MQ=255) aCGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGctc < 5:274146/137‑1 (MQ=255) cGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTCCCCCTTCAGAACACCCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGctct < 5:116404/137‑1 (MQ=255) cGCTCGCATCCTATCCCCCGGGGGGGTATATGTTAAAACCAACACCCCCTACACAACAACCATCCGATTAGCAATAAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGctct < 1:317133/137‑1 (MQ=255) ccccGCATCCTATCCCCCTGGGGGGTATATGGACAAACCAACAACCCCATCAGAACAACCATCCGCTTAGGCAACAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTg < 7:98970/134‑1 (MQ=255) cTCCCATCCTCTCCCCCTGGGGTTGATATGGTCAAACCAACAACCCCTTCACAACAACCATCCGCTTAGGCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTgg < 3:262369/137‑1 (MQ=255) tCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 7:134137/1‑137 (MQ=255) tCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 3:133547/1‑137 (MQ=255) tCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 4:46470/1‑137 (MQ=255) tCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 2:265334/1‑137 (MQ=255) tCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 1:246077/1‑137 (MQ=255) tCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGAATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGc > 3:246868/1‑137 (MQ=255) gCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCATAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGAAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCa > 1:42535/1‑137 (MQ=255) gCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCa > 5:252646/1‑137 (MQ=255) aTCCTATCCCCCTGGGGGGGATTTGGTCAAACCAACTACCCATTCACAACACCCATCCCCTTAGGAATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATc < 4:188794/137‑1 (MQ=255) aTCCTAGCCCCGTGGTGGGTAAATTGCAAAACCAACAACCCTAACACACCACCCATCCGCTTAGCAACCAAACCACACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATc < 1:140593/137‑1 (MQ=255) aTCCTAGCCCCCTGGGGGGTATATGTTCAAACCAACTACCCCTTCAGAAAAACCACCGGCTTAGGCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGAACTAATGTGATTTTTGCCCTTGCTCTGGCCATc < 8:179735/137‑1 (MQ=255) tCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCt > 4:148148/1‑137 (MQ=255) tCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTACGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCt > 5:315939/1‑137 (MQ=255) cccccTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAg > 7:80357/1‑137 (MQ=255) tGGGGGTTATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGATTAGGAATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTgg < 3:257106/137‑1 (MQ=255) gggggggATATGGTCAACCCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTggg > 1:73209/1‑137 (MQ=255) gggggggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCAGCTTGATAGCCTggg > 1:189257/1‑137 (MQ=255) gggggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGcc > 7:133259/1‑137 (MQ=255) gggggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGcc > 8:118038/1‑137 (MQ=255) gggATATGGTCAAACCACCTACCCCTTCAGAACAACCAGCCGCTTAGGCAGCAAAAGAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg < 7:29151/137‑1 (MQ=255) gggATATGGTCAAACCAACTACCCCTTCAGAACACCCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCGATCTTGATAGCCTGGGCCgg > 7:322331/1‑137 (MQ=255) gggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg > 7:124843/1‑137 (MQ=255) gggATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg > 2:155241/1‑137 (MQ=255) gATATGGTCAAACAAACTACACATGAAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCAATCAGCACTAAGGTGATTTATGCCATTGCTCTGGCCATCTTGATAGCCTGGGACGGGc > 6:161214/1‑137 (MQ=255) atGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGcaca > 1:242667/1‑137 (MQ=255) gTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACct > 2:232090/1‑137 (MQ=255) gTCAAACCAACAACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACct < 6:128213/137‑1 (MQ=255) cAACCCACCTACCCCTTCAGCACACCCAGCCGCTTAGGCATCAAAAGAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 2:295559/137‑1 (MQ=255) cAACCCAACACCCCCTTCACAACAACCATCCGCTTAGCCATCAAAACCACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 2:290793/137‑1 (MQ=255) cAAACCAACTCCCCCTTCAGACCAACCATCCGCTTACGCATCAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 2:225774/137‑1 (MQ=255) cAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 3:142074/137‑1 (MQ=255) aaacccAACTACCCCTCCACAACACCCATCCTCTTAGCCAACAAACGACCCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 5:227907/133‑1 (MQ=255) aaaacaaacTACCCCTTCAGAACAACCACCCGCTGAGCCATCAAAAGAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 8:93419/136‑1 (MQ=255) aaaaCCAACACCCCCTCCAGAACAACCATCCGATTAGCCAACAAAACAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 1:185745/136‑1 (MQ=255) acccAACTCCCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTgc < 1:26397/135‑1 (MQ=255) aaCCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTgc < 2:246077/137‑1 (MQ=255) aaCTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGctc > 2:82004/1‑137 (MQ=255) aaCTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGctc > 2:83893/1‑137 (MQ=255) aaCTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCAGCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCTGGCACAACTCTGCGctc > 1:269256/1‑137 (MQ=255) ccccTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg < 2:2136/116‑1 (MQ=255) ccccTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCgg > 1:2136/1‑116 (MQ=255) cccTTCATAACAACCACCCGCTTTGCCAAAAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATg < 2:73209/137‑1 (MQ=255) aataacaacCATCCCCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTc < 6:252646/134‑1 (MQ=255) taacaacCATCCGCTTAGGCATAAAAAGAACCACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGa < 5:146576/136‑1 (MQ=255) aaacaacCATCCGCTTCGGCATAAAAACAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGa < 8:124843/136‑1 (MQ=255) acaacCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGt > 2:184730/1‑137 (MQ=255) acaacCAGCCGCTTAGTCATCAAAATAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGt < 5:75135/137‑1 (MQ=255) aaacCATCCGATTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTc < 8:271051/136‑1 (MQ=255) aTCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTCAGCCa < 6:330241/137‑1 (MQ=255) tCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTGTATTGGTTCGAGTCAGCCAg > 3:190668/1‑137 (MQ=255) ttAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTCAGCCAGTCggg > 2:137660/1‑137 (MQ=255) cATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTCAGCCAGTCGGGAGTgg > 2:220315/1‑137 (MQ=255) aaGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct > 2:191473/1‑93 (MQ=255) aaGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACctct < 1:191473/93‑1 (MQ=255) | GCTGATGGCCGTGTTCGTGATCGCTCATGCCTTGAGTCTCATGCATCGATGAATTACGCTCGCATCCTATCCCCCTGGGGGGGATATGGTCAAACCAACTACCCCTTCAGAACAACCATCCGCTTAGGCATCAAAAGAAACACGACATGCTCAGCAACCCCATCAGCACTAAGGTGATTTTTGCCCTTGCTCTGGCCATCTTGATAGCCTGGGCCGGGCACACCTCTGCGCTCTTTATGGGTTCGAGTCAGCCAGTCGGGAGTGG > ACB122/3365102‑3365366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |