| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | 1734821 = | 75 (1.090) | 3 (0.050) | 3/236 | 6.8 | 4.3% | coding (148/753 nt) | CJ019_01633 | hypothetical protein |
| ? | ACB122 | = 5091718 | 63 (0.990) | coding (1513/1962 nt) | acs | Acetyl‑coenzyme A synthetase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCAAGCAAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/1734963‑1734821‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgcGACGAGGACGGTTACTACTGGATCACCGGCCGTGTGGATGACGTGCTCAACGTGTCCGGCCACCGCATGGGCACTGCCGAAATCGAAAGCGCCATGGTCGCGCACTCGAAGGTTGCCGAGGC < ACB122/5091718‑5091597 TCAAGCAAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGC > 8:270301/1‑136TCAAGCAAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGG > 2:288155/1‑135TCAAGCAAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGG > 5:246573/1‑135 aacCAAAGGAACGCCCGTTGCTGTTCAGCGGGCCGATGGTCCGAGCCTTCGTGGAAGGACGGAAGACAGTCACCGGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCGC < 7:294057/133‑1 AAGCAACGGAACGCCCGATCCTGTTCCGCGGGCCGATGGTCCGAGCCATCCGGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCG < 6:290737/135‑1 CAAAGGACCGCCGGATCCTGGTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGTAAGACCGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCGCGC < 6:4970/135‑1 AAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCGCGCCG > 8:213819/1‑136 AAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCG > 1:43947/1‑131 AAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCG < 2:43947/131‑1 CTTCAGTCACCGAGGTGTTCCCCTACGCGGGCGCGCCGCGACGAGGACGGTTACTACTGGATCACCGGCCGTGTGGATGACGTGCTCAACGTGTCCGGCCACCGCATGGGCACTGCCGAAATC > 3:198982/1‑123 CTTCAGTCACCGAGGTGTTCCCCTACGCGGGCGCGCCGCGACGAGGACGGTTACTACTGGATCACCGGCCGTGTGGATGACGTGCTCAACGTGTCCGGCCACCGCATGGGCACTGCCGAAATC < 4:198982/123‑1 cgGGGCGCGCCGCGACGAGGACGGTTACTACTGGATCACCGGCCGTGTGGATGACGTGCTCAACGTGTCCGGCCACCGCATGGGCACTGCCGAAATCGAAAGCGCCATGGTCGCGCACTCGAAGGTTGCCGAGGC < 4:398702/133‑1 TCAAGCAAAGGAACGCCCGATCCTGTTCAGCGGGCCGATGGTCCGAGCCATCCTGGAAGGACGGAAGACAGTCACCCGACGCCCGGTTAAGCCAGGCTTTCCCTCTTCAGTCACCGAGGTGTTCCCCTACGCGGGCGCGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/1734963‑1734821‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgccgcGACGAGGACGGTTACTACTGGATCACCGGCCGTGTGGATGACGTGCTCAACGTGTCCGGCCACCGCATGGGCACTGCCGAAATCGAAAGCGCCATGGTCGCGCACTCGAAGGTTGCCGAGGC < ACB122/5091718‑5091597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |