| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB122 | 2460725 = | 101 (1.210) | 3 (0.040) | 3/240 | 7.6 | 3.0% | coding (558/831 nt) | queF | NADPH‑dependent 7‑cyano‑7‑deazaguaninereductase |
| ? | ACB122 | 3581727 = | 101 (1.280) | coding (517/1272 nt) | ydcO_3 | Inner membrane protein YdcO | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAATCCGCTCCACACACTGCTCATGGAAGTCGGCATGCTGGCGGAAGCTGATCAGATAGGTCAGCAGGCTGGCATGGTCCAGCGCCCTGCCCTTGTACTGGACCACCACGCTGCCCCAATCCGGCTGGCCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/2460858‑2460725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggtgCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGCTGCGGTACTGGGCGTGGGCATGCTGGTGACCGTGGCCAGCGGTACGTTGCGCAGCGAGGC > ACB122/3581727‑3581860 AAATCCGCTCCACACACTGCTCATGGAAGTCGGCATGCTGGCGGAAGCTGATCAGATAGGTCAGCAGGCTGGCATGGTCCAGCGCCCTGCCCTTGTACTGGACCACCACGCTGCCCCAATCCGGCTGGCCGGTGC > 1:542494/1‑135 CCACCACGCTGCCCCAATCCGGCTGGCCGGTGCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGC > 7:286488/1‑106 CCACCACGCTGCCCCAATCCGGCTGGCCGGTGCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGC < 8:286488/106‑1 CGGTGCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCCGCCGCGCTATGCAGTGGGTGCGGTTCTGGGCGTGGGCATGCTGGTGACCGTGGCCAGCGGTACGTTGCGCAG > 1:154793/1‑133 CGGTGCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGCTGCGGTACTGGGCGTGGGCATGCTGGTGCCCGTGGCCAGCGGTACGTTGCGCAG > 7:535520/1‑133 CGGTGCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGCTGCGGTACTGGGCGTGGGCATGCTGGTGACCGTGGCCCGCGGTACGTTGCGCAG > 8:492191/1‑133 CGGTGCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGCGGCGGTACTGGGCGGGGGCATGGGGGTGACCGTGGCCAGCGGTACGTTGCGCAG > 2:492802/1‑133 GCAACCGCTGCTGGTACTGGCGATGTTCGTCACGTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGCTGCGGTACTGGGCGTGGGCATGCTGGTGACCGTGGCCAGCGGTACGTTGCGCAGCGAGGC < 2:234528/135‑1 GCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGCTGCGGTACTGGGCGTGGGCATGCTGGTGACCGTGGCCAGCGGTACGTTGCGCAGCGAGGC < 5:5858/135‑1 GCAACCGCGGCTGGTACTGGCGATGGTCGTCACCTACGTGCTGATGCGGCGGGTGCAGCCGCGCTATGCAGTGGCTGCGGTACTGGGCGTGGGCATGCTGGTGACCGTGGCCAGCGGTACGTTGCGCAGCGAGGC < 1:271110/135‑1 AAATCCGCTCCACACACTGCTCATGGAAGTCGGCATGCTGGCGGAAGCTGATCAGATAGGTCAGCAGGCTGGCATGGTCCAGCGCCCTGCCCTTGTACTGGACCACCACGCTGCCCCAATCCGGCTGGCCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB122/2460858‑2460725‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggtgCAACCGCTGCTGGTACTGGCGATGTTCGTCACCTACGTGCTGATGCGTCGGGTGCAGCCGCGCTATGCAGTGGCTGCGGTACTGGGCGTGGGCATGCTGGTGACCGTGGCCAGCGGTACGTTGCGCAGCGAGGC > ACB122/3581727‑3581860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |