New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	= 3376605	39 (0.890)	13 (0.300)	12/242	NT	31.3%	coding (501/546 nt)	CJ019_03184	hypothetical protein
	?	ACB143	= 5345406	18 (0.410)					coding (2030/2106 nt)	pnp	Polyribonucleotide nucleotidyltransferase

CAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/3376511‑3376605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGTCTAAGCGAACGTCACGCAATAGAGAAAGGGCCCT  <  ACB143/5345406‑5345300                                                                                                                                                                                                            CAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGAT                                                                     >  4:88838/1‑135            GAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCC                                                         >  5:206031/1‑136                 GGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGG                                                    >  3:206571/1‑136                     TTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCC                                                  >  1:76151/1‑134                          ATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCC                                            >  8:85426/1‑135                                 CGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGT                                    >  4:170633/1‑136                                     TAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCACGGGCGTCg                                  >  4:14935/1‑133                                              TAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACACCCGCGGCCGTATCAAGCTGGCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGTCTAAGCGAACGTC                       <  8:62086/136‑1                                                    AGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGTCTAAGCGAACGTCACGCAA                 >  6:290740/1‑136                                                    AGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCATCGGCCAAGGCCTCGGGCGTGTAAGCGAACGTCACGCA                  >  8:251688/1‑135                                                      AGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGTCTATGCGAACGTCACGCAA                 >  8:204249/1‑134                                                         ACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGTCTAAGCGAACGTCACGCAATA               >  1:179534/1‑133                                                                   TAATTTTTGCCTTATCTCGGCATGACCCCTACTGGACGTGGACACCCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGTCTAAGCGAACGTCACGCAATAGAGAAAGGGCCCT  <  7:46808/136‑1                                                                                                                                                                                                            CAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/3376511‑3376605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTCCCTGCGGCCAAGGCCTCGGGCGTCTAAGCGAACGTCACGCAATAGAGAAAGGGCCCT  <  ACB143/5345406‑5345300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.