New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	= 4364247	34 (0.560)	3 (0.050)	3/254	7.0	6.2%	intergenic (+327/‑337)	CJ019_04110/CJ019_04111	hypothetical protein/hypothetical protein
	?	ACB143	4419014 =	57 (0.950)					intergenic (+1/+329)	CJ019_04192/sohB	hypothetical protein/putative protease SohB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/4364166‑4364247 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaTGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGA  >  ACB143/4419014‑4419147                                                                                                                                                                                                                          GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCG                                                                                 >  5:71073/1‑137               CGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCC                                                                   <  6:71073/137‑1                                                                             aACTGATGAAGTTTTGGGACTGGTCTGAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAATAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGT     <  5:137409/136‑1                                                                                TGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGA  <  3:290105/137‑1                                                                                                                                                                                                                          GGCCAAGCCACGGACGATTTATCTGGCATCAAGAACATCGTAGTGTCATTTGACAGAAATCTGGCTTACTCATATACACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/4364166‑4364247 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaTGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGA  >  ACB143/4419014‑4419147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.