New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4470776	NA (NA)	3 (0.090)	3/242	5.3	NA	intergenic (+33/+23)	yjgN/valS	DUF898 family inner membrane protein/valyl‑tRNA synthetase
	?	CP009273	= 4470752	NA (NA)					intergenic (+9/+47)	yjgN/valS	DUF898 family inner membrane protein/valyl‑tRNA synthetase
Rejected: Coverage evenness skew score above cutoff.

GCGATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGATGACCGCTTCCGGTGCGCGGGCGACAAAGCCTTCGT  >  CP009273/4470640‑4470920                                                                                                                                         |                                                                                                                                                 gCGATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                                                                                                            <  1:131103/143‑1 (MQ=255) gCGATTTGGATGACCTTACTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCTAGTATTGCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                                                                                                            <  1:349616/143‑1 (MQ=255)  cGATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTTAGAGATAAAAAAGGCCGGCGCATGCTCCGGCCTTCGTTTtc                                                                                                                                           >  1:220371/1‑143 (MQ=255)   gATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGGGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                                                                                                          <  1:72506/143‑1 (MQ=255)   gATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                                                                                                          <  1:595039/143‑1 (MQ=255)     tttGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTATTAGCCAGTATTTCACGGGGAGTTATGCATTCTTTACCATATCTGTAAGAGATAAAAAAGGCCGGAGCGTGCACTGGCCCTCGTGTtcatc                                                                                                                                        >  1:286936/1‑143 (MQ=255)           tGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGa                                                                                                                            >  2:403194/1‑149 (MQ=255)                    tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAACAAAGGCCGGAGCCTGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgcgc                                                                                                                   >  2:34298/1‑149 (MQ=255)                    tttAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGGCGGAGCATGCTCCGGCCTTCGTTTTCATCACGGGGTCTTGATTa                                                                                                                         >  1:63339/1‑143 (MQ=255)                       aaccAATAAAGAAGAACAACCAGATAAGGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                                                                                                                <  2:111259/146‑1 (MQ=255)                        aTCAATAAAGAAGAACAACCAGATAAAGGCTTTTAAACTAGTAGTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggcg                                                                                                               >  2:345633/1‑149 (MQ=255)                          caacaaAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGAt                                                                                                             <  2:253273/149‑1 (MQ=255)                           caTAAATGAGACCAACCAGATAAAGTCTCCTTATCCCGTATTTCACGGGGAGGTATGCCTTCTTTACCATTTCTGTAAGAGATAATAAAGGCCGGAGCATGCCCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGcgcg                                                                                                                  <  1:197257/142‑1 (MQ=255)                           aaTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                                                                            >  2:128720/1‑149 (MQ=255)                            aTAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATaa                                                                                                           >  2:668695/1‑149 (MQ=255)                                      ccaccaagttAATGGGTTCCTGGCCAGTATTTCACGGGGAGTTATCCCTCTTTTACCATCTCTGGAGGATATATAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGc                                                                                                       <  1:69236/134‑1 (MQ=255)                                            aGATAAAGGGTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAt                                                                                           <  2:179460/149‑1 (MQ=255)                                             gATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGt                                                                                                <  1:520012/143‑1 (MQ=255)                                              aTAAAGGTTTCTTAGGCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGtt                                                                                               <  1:200231/143‑1 (MQ=255)                                                aaaGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCa                                                                                             <  1:361872/143‑1 (MQ=255)                                                  aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                                                                                     >  2:622728/1‑149 (MQ=255)                                                    gCTTCTGAGCAAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTTCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCa                                                                                         <  1:163557/143‑1 (MQ=255)                                                              cAGTATTTCACGGGGAGTTCTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGTAGCATGCTCCGGCCTTCGTTTTCATCCCTATGTAATGAGTACAACGCGGCGATAACAGCCTGCCGTTCAATCAGTTTCGCTTTCGCTTc                                                                         >  2:511460/1‑149 (MQ=255)                                                               aGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc                                                                              <  1:116815/143‑1 (MQ=255)                                                                 tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGc                                                                      >  2:177249/1‑149 (MQ=255)                                                                  aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCa                                                                     >  2:645672/1‑149 (MQ=255)                                                                    ttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATa                                                                   >  2:113240/1‑149 (MQ=255)                                                                       aCGGGGAGTTATGCCTTCTTTACAATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCACCGGCGTTCGTGTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGc                                                                      >  1:494768/1‑143 (MQ=255)                                                                           ggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTcc                                                            <  2:210476/149‑1 (MQ=255)                                                                               ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCtt                                                              >  1:386409/1‑143 (MQ=255)                                                                                    ccTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTATCGCTTCCGCATAGCCTTCCaac                                                         >  1:397279/1‑141 (MQ=255)                                                                                    ccTTCTTTACCATGTCTGGAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCa                                                   <  2:333389/149‑1 (MQ=255)                                                                                         tttACCTTTTCTCGAAGCGATAACNTAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTtctc                                                    <  1:362956/143‑1 (MQ=255)                                                                                         tttACCATTTCTGTAAGAGATAAAAACAGCCGGAGCATGCTCCGGCCTTCGGTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTtctc                                                    >  1:215727/1‑143 (MQ=255)                                                                                             ccATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTc                                          <  2:186278/149‑1 (MQ=255)                                                                                             ccATTACAGGAAGAGATAAAAAAGGCCGGACCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTc                                          <  2:650131/149‑1 (MQ=255)                                                                                               aTTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCCTCGCCTTCCCGCTTCTCACGctc                                              >  1:577638/1‑143 (MQ=255)                                                                                                      tAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTcgcg                                       >  1:296981/1‑143 (MQ=255)                                                                                                       aaGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGa                                      >  1:73888/1‑143 (MQ=255)                                                                                                         gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGATg                                    >  1:130670/1‑143 (MQ=255)                                                                                                              aaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGTCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGATGACCGCTTCCgg                         >  2:660409/1‑149 (MQ=255)                                                                                                               aaaaaGGCAGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAACAACCAAAAGCACGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGATGACCGCTTCCGGt                        >  2:512813/1‑149 (MQ=255)                                                                                                                         gAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGATGACCGCTTCCGGGGCGCGGGCGa              >  2:231771/1‑149 (MQ=255)                                                                                                                                     gCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGATGACCGCTTCCGGTGCGCGGGCGACAAAGCCttcgt  <  2:144072/149‑1 (MQ=255)                                                                                                                                         |                                                                                                                                                 GCGATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCTCACGCTCTTTCGCGATGACCGCTTCCGGTGCGCGGGCGACAAAGCCTTCGT  >  CP009273/4470640‑4470920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.