| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | CP009273 | 2,400,257 | IS5 (+) +4 bp | intergenic (‑137/‑780) | lrhA ← / → alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 35 (0.860) | 33/290 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 2400257 = | 0 (0.000) | intergenic (‑137/‑783) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 58 (1.420) | 39/290 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 2400260 | 0 (0.000) | intergenic (‑140/‑780) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
TCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACT > CP009273/2400117‑2400408 | tCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAACATGCATATGATTTGCACTAAggcag < 2:91901‑M2/149‑6 (MQ=255) atatTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgc > 2:16317‑M2/1‑140 (MQ=255) cTTACTGGCGGCGCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATACATATGAGTTGCACTAAggaaggtgcaaa < 1:122613‑M2/143‑13 (MQ=255) cgaccGGCAGCTCATACTGAGCTGGTTCATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGCGCCTCCCGGGCAGTTTCGTCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaac > 1:502323‑M2/3‑130 (MQ=255) tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatctccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTcc < 2:453482‑M2/25‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattgccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGt < 2:60791‑M2/27‑1 (MQ=255) ggcggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTTATGTGGCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgat > 2:340023‑M2/1‑125 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGtt < 2:662766‑M2/28‑1 (MQ=255) gaaggaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGtt < 1:619273‑M2/23‑1 (MQ=255) aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaaggatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTtat > 2:325196‑M2/120‑149 (MQ=255) tacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGtt < 1:125251‑M2/28‑1 (MQ=255) tCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgaga > 2:463673‑M2/1‑119 (MQ=255) tCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCAATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgaa < 1:38405‑M2/143‑25 (MQ=255) tcctgAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGGTTCACTAAggaaggtgcgaacaagtccctgatatg > 1:292279‑M2/3‑116 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTtata > 1:182757‑M2/113‑143 (MQ=255) ctaaataggctgattcaaggcctttacgggagaaaaaatcggctcaaacatgaggaaatgaaatgagtgagtcagccgagaagaatttccccgcttattcgcaccttccCTCAAAAAACGACTCACATTGTTCCGTTCTAATg > 1:191674‑M2/110‑143 (MQ=255) ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAACGACTCACATTGTTCCGTTATAATGCCTGaa > 2:471632‑M2/110‑149 (MQ=255) ctaaataggcgtattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccctctgattcgcaccttccCTAAATAAGCGACTCACATTGTTCCGTTATAATGCCTGaa < 2:357987‑M2/40‑1 (MQ=255) agaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg < 2:321181‑M2/44‑1 (MQ=255) tGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAgggacgtgcgcacaagcccctggtatgaaatcatatttgta < 2:37597‑M2/149‑42 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagacgagaagaatttccccgcttattcgcaccttccCTACAAAAGCGACTCACATTGTTCCGTTATAATGCCtgaact > 1:74040‑M2/102‑141 (MQ=255) tAATGTTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct > 2:126845‑M2/1‑104 (MQ=255) tAATGCTGTGCACACACAAACAAGCAATTAACAATGGAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg < 1:453426‑M2/143‑40 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATCGTTCCGTTATAATGCCTGAAGTa > 1:526544‑M2/101‑143 (MQ=255) atcaaggcattaacgggagaaaaaatcggcccaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGaa < 2:190800‑M2/53‑1 (MQ=255) tgtgCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc < 2:579993‑M2/149‑52 (MQ=255) cacacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatagtgtttgtcatctggagccatag < 2:73929‑M2/149‑56 (MQ=255) cacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGGTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaagatgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat < 1:109438‑M2/143‑54 (MQ=255) acaaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGACAGTAAAAAAGTATATGAGTGGCACTAAggaaggtgcgaagaagtccctgatatgagatcatgtttgtcctctggagccata < 1:259433‑M2/143‑55 (MQ=255) aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 2:645683‑M2/1‑87 (MQ=255) aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 2:242243‑M2/1‑87 (MQ=255) aacaaGGAATTCCATTTGGAAGTTGCCTCCCCTGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCCTATGAGTTGCAGTAAtgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa > 1:310996‑M2/1‑86 (MQ=255) caaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 1:73067‑M2/1‑84 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgaaatgacagagtcagccgagaagaatttccccgcttatccgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATATTCAGGGATCg > 2:456618‑M2/80‑149 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGc > 2:119079‑M2/79‑149 (MQ=255) aGCAATTCCATTGGTAATGTGCCCCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 1:297959‑M2/1‑82 (MQ=255) gCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataaaacagggttcatc < 2:11053‑M2/149‑69 (MQ=255) aTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc > 1:58585‑M2/1‑78 (MQ=255) aTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttgagcatgagtca < 2:32167‑M2/149‑77 (MQ=255) aTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 1:331446‑M2/1‑73 (MQ=255) tttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGGGTTGCACTAAggaaggtgcgaacaagtccctggtatgagatcatgtttgtcatcgggagccatagaacagggtgcatactggatcat < 2:153494‑M2/149‑78 (MQ=255) gTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAACGGAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggggccctagaacagggttcatcatgagt < 1:238515‑M2/143‑75 (MQ=255) tAATGTGCCTCCCTGGCAGTTTCATTCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:471506‑M2/143‑76 (MQ=255) tAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac < 2:585676‑M2/149‑82 (MQ=255) aaacatgaagaaatgaaatcactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTAt > 1:431833‑M2/65‑143 (MQ=255) aTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat > 1:361571‑M2/1‑66 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacattccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGACCGCATATCTCTTAAg > 1:106514‑M2/61‑143 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTactcgct > 2:66359‑M2/58‑149 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttatgcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAAGGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCtt < 2:132133‑M2/95‑1 (MQ=255) ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 2:696331‑M2/1‑57 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttatttgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTactca > 1:68263‑M2/54‑143 (MQ=255) aaagaaatgactgagccagcctagaacaacttccccgcatatacccaccctccCTTAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCGGGGATCGCATATCTATTAAGTTACTCACTCttt < 2:450516‑M2/96‑1 (MQ=255) tGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcacgtttgtcatctggagccatgaaacagggttcatcatgagtcatcaacttacctt < 1:429149‑M2/143‑89 (MQ=255) gCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcatctggagccatagaacagggttcataatgagtcatcaacttcccttcg < 1:102915‑M2/143‑91 (MQ=255) aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTtata > 2:534247‑M2/50‑149 (MQ=255) actgagtcagccgagaacaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTAt < 2:202882‑M2/105‑1 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTa < 1:510622‑M2/100‑1 (MQ=255) ctgagccagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTCGATCACAGAATTTATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATg < 2:375691‑M2/106‑1 (MQ=255) cATCCGGAACCCGAACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt > 2:402911‑M2/1‑46 (MQ=255) gttcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTGATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACa < 2:52750‑M2/109‑1 (MQ=255) ccGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 2:66202‑M2/1‑43 (MQ=255) ccGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 2:148737‑M2/1‑43 (MQ=255) cGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 1:90241‑M2/143‑102 (MQ=255) cGGAACCCGGACGAAAGGAAAAATGCATATAAGCTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa > 1:66524‑M2/1‑42 (MQ=255) cccGGACGAAAGTAAAAGTGCATATGAGTTGAACGAAggaaggtgcgaacaagtccctgatatgagatcatggttttcatctggagccatagaacagggttcatcctgagtcatcaacttaccttcgccgacagtgaattcag > 1:185530‑M2/1‑37 (MQ=255) atttccccgcttattcgcaccttccCTAAAAAAGCGACTCACCTTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCgtgt < 1:452182‑M2/118‑1 (MQ=255) aGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtacctgatatgagatcatgtttgtcatctggagccatagaacagggttaatcatgagtcatcaactaaccttcgccgacagtgaattcagcagtaagcgc < 1:602435‑M2/143‑117 (MQ=255) cccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCCATTTATGACATGCGCGTGTTTg < 1:537908‑M2/121‑1 (MQ=255) tAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac > 2:295393‑M2/1‑25 (MQ=255) aTGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga > 1:9551‑M2/1‑20 (MQ=255) tGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggggccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa < 2:213045‑M2/149‑131 (MQ=255) tgctcttccgatctctaaggaaggtgcgaacaagtctctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgcgtcatcaacgtaccttcgccgacagtgaagtcagcagtaagcgccgtcagaccagaaaa > 2:360098‑M2/15‑18 (MQ=255) gCATATGAGTTGCACTAAggaaggtgcgaataagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgctgacagtgaattcagcagtaagcgccgtcagacc > 1:33269‑M2/1‑18 (MQ=255) atatGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga > 2:628479‑M2/1‑16 (MQ=255) tcgtaccttgcCGAAGAAAGCGAGTCACATTGTTCCGTTATAATGCCTGAAGGAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATTACATGCGCGTGTTTGTAtaaatgtaa < 1:324763‑M2/132‑1 (MQ=255) tcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTAtaaatgtaa > 1:53842‑M2/12‑143 (MQ=255) cgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCCCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTAtaaatgtaaa > 1:508600‑M2/11‑143 (MQ=255) tccttccCTAAAAAACCGACTCACCTTGTTTCGTTATAAGCCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATaaatgtaaatgt < 1:335721‑M2/136‑1 (MQ=255) ttGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaactcagcagtaagcgccgtcagaccagaaaagagattttc > 2:500402‑M2/1‑9 (MQ=255) cttccCTAAAAAAGTGACTCACAAGGTTCCGTTATAATACCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCATGTTTGTATAAATGTAAATGTGAGTCCtt < 2:442565‑M2/144‑1 (MQ=255) cttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGa > 1:155697‑M2/6‑143 (MQ=255) aCTAAggaaggtgcgcacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt < 1:502485‑M2/143‑139 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcctgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc > 2:11192‑M2/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaagaagatttt < 1:62041‑M2/143‑140 (MQ=255) tAAgggaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacacggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagcccagaaaagagatcgga < 1:321219‑M2/143‑141 (MQ=255) tAAggaaggtgcgtacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaagaaagagattttc < 1:441686‑M2/143‑141 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 1:222510‑M2/143‑141 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc > 1:441188‑M2/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgataagacgtcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacccgaaaagagattttc < 1:293491‑M2/143‑141 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttggccgacagagacttcagccctaagcacagtcagaccagcaaagagcttttattgtgac < 2:128912‑M2/149‑148 (MQ=255) aggcaggtgcgaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 1:157362‑M2/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg < 2:669325‑M2/149‑149 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:63410‑M2/143‑143 (MQ=255) | TCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTCCACT > CP009273/2400117‑2400408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |