New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	301106 =	78 (1.120)	3 (0.040)	3/260	NT	4.0%	coding (1423/1644 nt)	ecpD	polymerized tip adhesin of ECP fibers
	?	CP009273	301143 =	68 (1.010)					coding (1386/1644 nt)	ecpD	polymerized tip adhesin of ECP fibers

TCTACCGTACGCAGCGAAATGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCACCTGCGCGGGTCCGGTCACCTTGAT  >  CP009273/300961‑301250                                                                                                                                                  |                                                                                                                                                 acTACCGTACGCAGCGAAACGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGTGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCAccc                                                                                                                                               <  1:278231/148‑1 (MQ=255)  accaccagcggtaaaacagctgccgacgacgtgctgatcaaggtgaccggacccgcgcaggtgattggcgggcgctcctattgtgtcttcagctccgatgacggtaaggcgaaagtaccgttcacggcgacactttcctttattACCCg                                                                                                                                              <  1:794489‑M1/5‑1 (MQ=255)    caccagcggtaaaacagctgccgacgaagtgctgatcaaggtgaccggacccgcgcaggtgattggcgggcgctcctattgtgtcttcagctccgatgacggtaaggcgaaagtaacgttcccggcggccagttcctttctta                                                                                                                                                  <  2:705259‑M1/1‑1 (MQ=255)    aCCGTACGCAGCGAAATGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCa                                                                                                                                                  >  2:1101126/1‑143 (MQ=255)       cagcggtaaaacagctgccgacgaagtgctgatcaaggtgaccggacccgcgcaggtgattggcgggcgctcctattgtgtcttcagctccgatgacggtaaggcgaaagtaccgttcccggcgacactttcctttattAccc                                                                                                                                               >  2:932581‑M1/140‑143 (MQ=255)          cGCAGCGAAATGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTa                                                                                                                                      <  1:660268/149‑1 (MQ=255)          cGCAGCGAAATGGCGTGACCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTa                                                                                                                                      <  1:529597/149‑1 (MQ=255)          cGCAGCGAAATGGCCTTACCCATTGGAATCGAAAATTTGACCGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTa                                                                                                                                      <  1:400660/149‑1 (MQ=255)             aGCGAAATGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCGCCCGGCCTc                                                                                                                                         >  2:78991/1‑143 (MQ=255)             aGCGAAATGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCCTc                                                                                                                                         >  2:520124/1‑143 (MQ=255)              gCGAAACGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGCGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCg                                                                                                                                        <  2:1013961/143‑1 (MQ=255)                caaaTGGTGTTATCCATTGGAATTGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCTGTCCACGGTCTGGTCAACCACAGCGCCTCGGTCAGATCCCGCCAGCTATCATCGCACCCGGCATCGTa                                                                                                                                      <  2:541009/142‑1 (MQ=255)                 aaaTGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCGCGCGATCATCGCACCCGGCACCGtgg                                                                                                                                     >  2:810449/1‑141 (MQ=255)                 aaaTGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGttttt                                                                                                                               >  1:335094/1‑149 (MQ=255)                  aaTGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTg                                                                                                                              <  1:1161547/149‑1 (MQ=255)                   agctgccgacgaagtgctgatcaaggtgaccggacccgcgcaggtgattggcgggcgctcctattgtgtcttcagctccgatgacggtaaggcgaaagtaccgttcccggcgacactttcctttattCCCCGGCATCGTAGGTTTTTGt                                                                                                                             <  1:20832‑M1/22‑1 (MQ=255)                       cGTTATCCATTGGAATCGAAGATTTGACTGTGGTCTTATCCATCTGCCCCGCTTGGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCt                                                                                                                         <  1:817999/149‑1 (MQ=255)                       cGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCt                                                                                                                         <  1:209705/149‑1 (MQ=255)                        gTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCCCTTCGCCAGAGATATCAGTCCCCGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCCCCCCGCCTCGCATGTTTTTGTAGCTc                                                                                                                        >  1:694479/1‑149 (MQ=255)                        gTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTg                                                                                                                              <  2:43827/143‑1 (MQ=255)                         ttATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTCGGTTTTTGt                                                                                                                             >  2:919419/1‑143 (MQ=255)                               agtGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCAACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGGCATCTCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCtac                                                                                                                       >  2:53685/3‑141 (MQ=255)                               aTTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGGCGGGTTTCGTAGCTcc                                                                                                                       >  2:1111602/1‑143 (MQ=255)                               aTTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCACACCCGGCATCGTAGGGTTTGGTAGCTcc                                                                                                                       >  2:639943/1‑143 (MQ=255)                                   gAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTg                                                                                                                   <  2:761058/143‑1 (MQ=255)                                   gAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTg                                                                                                                   <  2:1027361/143‑1 (MQ=255)                                      atccaggtgaccggacccgcgcaggtgattggtgggcgctcctattgtgtcttcagctccgatgacggtaaggcgaaagtaccgttcccggcgacactttcctttattACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGtaata                                                                                                          >  1:1154189‑M1/109‑149 (MQ=255)                                        gAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGCTATCGGGCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCGTCGTGGGGTTTTGTAGCTCCGTTGCGGGTAATaaa                                                                                                        >  1:1225365/1‑149 (MQ=255)                                        gAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTCATgaa                                                                                                        >  1:189470/1‑149 (MQ=255)                                             tttGATTGTTGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGaaa                                                                                                   <  1:293089/149‑1 (MQ=255)                                              ttGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATaaa                                                                                                        >  2:591084/1‑143 (MQ=255)                                              ttGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGGAAg                                                                                                  >  1:998727/1‑149 (MQ=255)                                               ttaCTGTGGGCTTACCCATCTGCCCCCCTTCGCCAGAGAGATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTCGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAgt                                                                                                 <  1:259070/147‑1 (MQ=255)                                                   tgtgGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTGATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAGTGAAGGACAgcgtgg                                                                                             >  1:469852/1‑147 (MQ=255)                                                          ttATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGaa                                                                                      >  1:1299954/1‑149 (MQ=255)                                                          gcaggtgattggcgggggctcctattgtgtcttcagctccgatgacggtaaggcgaaagtaccgttcccggcgacactttcctttattACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGc                                                                                            >  2:17205‑M1/89‑143 (MQ=255)                                                           tATCCATCTGCCCCACTTCGCCAGAGATATCAGACCACGGTGCGGTCCACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGAAGGTTTTTGTAGCTCCGTTGCGGGTAATCAAGGAAAGCGTCGcc                                                                                           >  2:1124059/1‑143 (MQ=255)                                                            aTCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCGATCATCGAACCCGGCAACGTAGGTTTTTTTAGCTCCGTTGCGGGTAATAAAGGAAAGTGACGcca                                                                                          >  2:530835/1‑142 (MQ=255)                                                             tCCATCTGCCCCCCTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCgg                                                                                         <  2:939835/143‑1 (MQ=255)                                                              ccATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGt                                                                                  <  1:1017926/149‑1 (MQ=255)                                                               cATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTa                                                                                 <  1:165484/149‑1 (MQ=255)                                                                     ccccACTTCGCCAGAGATATCAATCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCAAACTAGCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGATAATAAAGAAAAGTGTAGCGGGGAACggga                                                                                 >  2:113224/1‑141 (MQ=255)                                                                      cccACTTCGCCCGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGc                                                                          <  1:104014/149‑1 (MQ=255)                                                                      cccACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTGTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGc                                                                          >  1:704054/1‑149 (MQ=255)                                                                       ccACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGcc                                                                         <  1:398212/149‑1 (MQ=255)                                                                        cccctCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCt                                                                        <  1:525409/145‑1 (MQ=255)                                                                         aCTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCCTATCCCGCCAGCAATCATCGCACCCGGCACCGAAGGATTTCGTAGAACCATCGCGGGTGATAAAAAAAAGTGTCGACGGGGAAGGTACtat                                                                             >  2:31787/1‑141 (MQ=255)                                                                          cTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTc                                                                            <  2:1146811/143‑1 (MQ=255)                                                                            tCGCCAGGGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGc                                                                          <  2:292049/143‑1 (MQ=255)                                                                             cGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGcc                                                                         <  2:1007263/143‑1 (MQ=255)                                                                                 agagATACCAGGCCACGGTGTGGTCAACCACAGCGCATCGGCCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCAt                                                               <  1:63327/149‑1 (MQ=255)                                                                                     atatCAGTCCACGGTGTGGTCAACCACAGCGCATCGTTCATATCCCGCCAGCTATCATCGCACCCGTCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGa                                                           <  1:529385/149‑1 (MQ=255)                                                                                       atCATTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCCCCCGGCATCGTAGGTTTTTGTAGCTCCGTGGCGGGTAATAAAGGAACGTGTCGCCGTGAGCGGTCCTTTCGGCTTACCGTCAt                                                               >  2:606448/1‑143 (MQ=255)                                                                                       atCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGGAATAATGGAAAGTGTCGCCGGGGAGGGTACTATTGCCTTCCCGCCATCGgcgc                                                         >  1:62624/1‑149 (MQ=255)                                                                                         aaGTACACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCGTCGTAGGTTGTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGCACGGTGCTTTCGCCTTACCGTCACCg                                                             >  2:195170/2‑143 (MQ=255)                                                                                            tCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGAGTTTGTAGCTCCGTTGCGGGTAATAAAGGGAAGTGTAGCCGCGAACGGTACTTCCGACATACCGCGATCggcc                                                          >  2:551161/1‑141 (MQ=255)                                                                                               gcggggtgcgcAACCAGAGCGAATCGGTCATATCCCGCCCGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTg                                                       <  2:647137/133‑1 (MQ=255)                                                                                                 gtggtgGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGaa                                                     <  2:319758/140‑1 (MQ=255)                                                                                                 ggTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGaa                                                     <  2:443693/143‑1 (MQ=255)                                                                                                 ggTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCCTCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGaa                                                     <  2:288115/143‑1 (MQ=255)                                                                                                   tgtgGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCTGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTGGCCTTACCGTCATCGGAGGTGAAGa                                                   >  2:771603/1‑143 (MQ=255)                                                                                                     tgGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCCTCGCAACAAGGGTCGTATGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAg                                           <  1:37826/149‑1 (MQ=255)                                                                                                       gTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCCTCGTAGGTTCTTGTCGCTCCGTTGCGGGTAACCAAGGAAGGGGTCGCCGGGGACGGGACGGTCGCCTGACCGTCATCGGAGCTGAGGGcaca                                               >  2:379070/1‑143 (MQ=255)                                                                                                        tCAACCACAGCGCATCGGTCCTATCCCGCCAGCTATCATCGCCCCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAGCGGTACTTTCGCCTTGCCGTCATCGGAGCTGAACACCCAATAGGAg                                        >  1:687178/1‑149 (MQ=255)                                                                                                        tCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACaa                                              <  2:479834/143‑1 (MQ=255)                                                                                                        tCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGGTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCGTCGGAGCTGAAGACACAATAggcg                                        >  1:487578/1‑147 (MQ=255)                                                                                                           aCCACAGCCCCTCGGTCGTATCCCGCCAGCTATCATCGCACCCGGCATTGTAGGTGTTTGTAGCTCCGTTGCGGGTAATACAGGAAAGCGTCGCCGGGTACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAg                                           <  2:220336/143‑1 (MQ=255)                                                                                                               caGCGCAACGGTCATATCCCGCCAGCTAACATCGCACCCGGTATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCTCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGcgcccgc                                 <  1:620395/149‑1 (MQ=255)                                                                                                                 gcgcATCGGCCATATGCCGCCAGCTATAATCACACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGCGTCGCCGGGAACTGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCa                               <  1:742190/149‑1 (MQ=255)                                                                                                                 gcgcATCGCTCATATCCCGCCAGCCATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGATCGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCa                               <  1:611479/149‑1 (MQ=255)                                                                                                                  cgcATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCaa                              >  1:1170554/1‑149 (MQ=255)                                                                                                                    cATCGGTAATATCCCACCAGCTATCATCACCATAGCGATCGGAGGTTTTTGTAGCTCCGTTGCGGGTGATAAAAGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGcgcccg                                  >  2:516401/1‑143 (MQ=255)                                                                                                                     aTCGGTCATACCCCGCCAGCTATCATCGCACCCGGCAGCGGAGGTTTTTGTGGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGcgcccgc                                 <  2:130777/143‑1 (MQ=255)                                                                                                                      ttggTCAGCTCCCGCCTCCTATCATCGCACCCGGCCTCGTCGCGTTTTGTAGCTTCGTTGCGGGTAATAAAGGAAAGCGTCGCCGGGAACGGTACTTTGGCATTACCGTCATCGGAGCTGAAGACACAATAGGAGcgcccgcc                                <  2:594938/141‑1 (MQ=255)                                                                                                                      tCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGcgcccgcc                                <  2:420082/143‑1 (MQ=255)                                                                                                                      tCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCAc                          <  1:1246512/149‑1 (MQ=255)                                                                                                                          tCATATCCCGCCCGCTATCATCGCACCCGGCATCGTCGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATc                            <  2:724760/143‑1 (MQ=255)                                                                                                                          tCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATc                            <  2:726495/143‑1 (MQ=255)                                                                                                                          tCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATc                            <  2:520304/143‑1 (MQ=255)                                                                                                                            atatCCCGCCAGCGATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCAc                          <  2:164836/143‑1 (MQ=255)                                                                                                                             tatCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCAcc                         >  2:137821/1‑143 (MQ=255)                                                                                                                                 ccGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACCATAGGAGCGCCCGCCAATCACCTgcg                     >  2:58040/1‑143 (MQ=255)                                                                                                                                   gCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCACCTGcgcg                   <  2:305212/143‑1 (MQ=255)                                                                                                                                        cTACCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGAGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCACCTGCGCGGGTCCGGTCAc        <  1:1263037/149‑1 (MQ=255)                                                                                                                                          atcatcGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCACCTGCGCGGGTCCGGTCACCt      >  1:706039/1‑149 (MQ=255)                                                                                                                                           tcatcGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCACCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCACCTGCGCGGGTCCGGTCACCtt     <  1:1232512/149‑1 (MQ=255)                                                                                                                                              tcGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCACCTGCGCGGGTCCGGTCAc        <  2:875612/143‑1 (MQ=255)                                                                                                                                              tcGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTGTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATGACCTGCGCGGGTCCGGTCACCTTgct  >  1:395816/1‑147 (MQ=255)                                                                                                                                                  |                                                                                                                                                 TCTACCGTACGCAGCGAAATGGCGTTATCCATTGGAATCGAAAATTTGACTGTGGTCTTATCCATCTGCCCCACTTCGCCAGAGATATCAGTCCACGGTGTGGTCAACCACAGCGCATCGGTCATATCCCGCCAGCTATCATCGCACCCGGCATCGTAGGTTTTTGTAGCTCCGTTGCGGGTAATAAAGGAAAGTGTCGCCGGGAACGGTACTTTCGCCTTACCGTCATCGGAGCTGAAGACACAATAGGAGCGCCCGCCAATCACCTGCGCGGGTCCGGTCACCTTGAT  >  CP009273/300961‑301250

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.