| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2269346 | 24 (0.340) | 39 (0.560) | 30/270 | NT | 61.9% | coding (595/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 3576788 = | NA (NA) | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA | |||||
Only 100 of 112 total aligned reads displayed.
CTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGTA > CP009273/2269199‑2269493 | cTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGg > 1:985567‑M1/1‑148 (MQ=255) aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAg > 1:422003‑M1/136‑149 (MQ=255) aacctgaatctgaggcagcaccgggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAg > 1:290689‑M1/136‑149 (MQ=255) tctctGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc > 1:1178856/1‑149 (MQ=255) acctgaatcggaggcagcaccgggcacggctggggcggaagtcgctgtcgttctcaaaatcggtggcgctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGc > 1:252157‑M1/135‑149 (MQ=255) acccgaatccgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGc > 1:337128‑M1/135‑149 (MQ=255) tctGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGGCGTACAGCCt > 1:103094/1‑149 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaagagtatcaatcagttggagtcattaccCCAGCGTCGTACAgcca < 1:1164068‑M1/17‑2 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCt < 1:390189‑M1/17‑1 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCt > 1:442037‑M1/133‑149 (MQ=255) cggaatctgaggcagcacctggcacgcctgggacggaagtctgtgtcgttctcaaaagcggtggagctgcatgacaaagtcatcgggcattatctgcacataaaacactatcaataagttggagtcattaccCCAGCGTCGTa > 2:510120‑M1/133‑143 (MQ=255) ctGTTCCGGCGTGCTGCGCGTTGTGGCGGGGGCGCTACAAGGCTACTACGGCGGTAAAGTCGCTCTCTGGGGACAACGCTTCATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggt < 2:28423‑M1/143‑4 (MQ=255) gaatctgaggcagcacctggcacggctgggacggaagtcgcggtcgttctcaaaatcggcggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTaa < 1:863834‑M1/19‑1 (MQ=255) atctggggtagcacctggaccgggtgggacggaagtcgctgtcgttctcaaaatcggtggagctgcctgccaaagtcatcgggcattatctgaacataaaacaccatcaataagttggggtcattcccCCAGCGTCGTACAGc > 2:872301‑M1/129‑143 (MQ=255) ctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTc > 1:736570‑M1/127‑149 (MQ=255) cAGCGTGATGGGCGTGCTGGCGGGGGCGCTACACGGCTATTACGGCGGTAAAGTCGCTCTCAGGGGACAACGGTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTGTTTGATTATTTTACTTTCCAGCGTCGggggatgctgccaac > 1:952815‑M1/1‑134 (MQ=255) ggggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtg > 1:1098643‑M1/125‑149 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtg > 1:927879‑M1/125‑149 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtg > 1:927822‑M1/125‑149 (MQ=255) ggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggt > 1:383805‑M1/123‑149 (MQ=255) gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGgct < 1:164111‑M1/31‑1 (MQ=255) gcacctggcacggcggggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtg > 2:906409‑M1/119‑143 (MQ=255) acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggt > 2:357569‑M1/117‑143 (MQ=255) ggCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAAGGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGGTTGTGTTACTTTCCAGCGTCGggggatgctgccaacttcc > 2:28656‑M1/1‑124 (MQ=255) ctggcacggctgggacggaagtcgctgttgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg < 1:96358‑M1/35‑1 (MQ=255) tGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGAATATTTTCCTTGACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa > 1:883902/1‑149 (MQ=255) gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGgctg < 2:288649‑M1/32‑1 (MQ=255) cTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgta < 1:828857‑M1/149‑32 (MQ=255) ggCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTACTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTa < 1:752249/149‑1 (MQ=255) gCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAGGTGTGGTCGGGGATGCCGACGCTGATTGTGATTATTTTACTTTCCAGAGCAGgtggatgctgccaacttgctgctttagtgtatga > 1:241684‑M1/1‑115 (MQ=255) gCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttcctgcttaagt > 2:884082‑M1/1‑115 (MQ=255) gCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATATCTGGGGGCGACGCTATATTGAAGTATGGACGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGAGTCGTACAGGCTAACTTCTGGTGGCTGATggg > 2:529226/1‑142 (MQ=255) ctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACt < 1:1189135‑M1/44‑1 (MQ=255) gggggCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGGCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTGCAGCCTAAATCATGGTGGCTGCTGGCAATTGCTg > 1:552021/1‑149 (MQ=255) gcgcTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgt < 1:73865‑M1/149‑41 (MQ=255) acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCtt > 1:320744‑M1/101‑149 (MQ=255) aaGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGATGTATGGACGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtt > 2:736228‑M1/1‑102 (MQ=255) ggCTATGACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttt < 2:1031842‑M1/143‑44 (MQ=255) gctgtcgtgctccacatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaatacgttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGtt > 2:802505‑M1/92‑143 (MQ=255) tATTACGGCGGTAAAGGCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttga < 2:93962‑M1/143‑47 (MQ=255) gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGAt > 1:225202‑M1/89‑149 (MQ=255) gttaGGGCGGTAGAGTCGATCTCTGTGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTCTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag < 2:322984‑M1/142‑48 (MQ=255) ttcgggcggtaaaGTCGGTCTCTGGGGACAACGCTTTATTGAATTATGGTCGGGGACGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 2:776158‑M1/139‑49 (MQ=255) cggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttggggtgc > 2:644654‑M1/1‑92 (MQ=255) cggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGCAAGGCCGGGGTGGCCGACGCATTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt > 1:1281226‑M1/1‑92 (MQ=255) ggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTGGTTTGGCTGGATGAGTCt > 1:411763/1‑149 (MQ=255) ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGAt < 2:581450‑M1/61‑1 (MQ=255) tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGGGTCTg < 1:448189‑M1/68‑1 (MQ=255) aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTc > 1:926523‑M1/79‑149 (MQ=255) tAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg < 1:1271075/149‑1 (MQ=255) tAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCAACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt < 2:562525‑M1/143‑58 (MQ=255) tAAAGTCGATCGTTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc < 1:1112754‑M1/149‑64 (MQ=255) aGTCGATCTCTGGGGACACCCCTTTATGGAATTATGGTCTGGGGTGGCGACGCTGTTTTTGATTGTGTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggggctccattggc > 2:1139563‑M1/1‑83 (MQ=255) gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTGGGCTGGATGAGTCTGGTc < 2:397534‑M1/71‑1 (MQ=255) ggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCgg < 2:759472‑M1/73‑1 (MQ=255) gATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct > 1:1176022‑M1/1‑79 (MQ=255) aTCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCGTGGTCGggtgatgctgccaacttactggtttagtgtatgatggtgtttttggggtgctccagtggcttctg > 2:344255‑M1/1‑78 (MQ=255) gctgcatgacaaagtcatcgggcattatctggacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCgt > 2:1089690‑M1/68‑143 (MQ=255) ctGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc > 2:879684‑M1/1‑74 (MQ=255) ctGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc > 2:665820‑M1/1‑74 (MQ=255) ggACAACGCTTCATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGa < 1:129826/149‑1 (MQ=255) gACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca > 2:899043‑M1/1‑69 (MQ=255) aCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGcgtgatgctgccaacttactgatttagtgtatgatggtgtttttggggtgcttcagtggcttctgtttctatcag < 2:565679‑M1/143‑76 (MQ=255) gCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGGTGGATGAGTCTGGTCGGCGGGGTtcgggcggcg > 2:947665/1‑141 (MQ=255) ttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGt > 1:804809/1‑149 (MQ=255) atcgggcattatctgaacataaaacactatcaataagttgcacacattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGGTTTTACGt < 1:631508‑M1/98‑1 (MQ=255) cgggcattatctgaaaataaaacactaccaataaggtggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGttttt > 2:224045‑M1/50‑143 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttccgc > 1:293369‑M1/1‑56 (MQ=255) ggcattaactgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTc > 1:461447‑M1/48‑149 (MQ=255) gAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt > 2:966822‑M1/1‑55 (MQ=255) cattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGt < 2:821222‑M1/98‑1 (MQ=255) gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTaa > 1:503294/1‑149 (MQ=255) gaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTGACGTAGTGGtaatttgga < 1:699600‑M1/112‑4 (MQ=255) aacctaaaccactatcaataagttggagtcattaccCCCGCGTCGTACAGCCTAACTTCTGGTGGCTGTTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAAt > 2:400850‑M1/37‑143 (MQ=255) taaaaccctatcaatacgttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACa > 1:478058‑M1/33‑149 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGACGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgttcctcctgttcagctactgacggggtggtg < 1:847824‑M1/149‑110 (MQ=255) tttttGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGCGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGcccc > 1:2962/1‑146 (MQ=255) ttGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc < 2:1038063‑M1/143‑119 (MQ=255) ttatcTTACTTTCCACCGTTGTATAGCCTATCTTCGGGTGGCTGCTTGCAATTATTGTCTTGTTTGGCTGGATTAGTCTGGTCGGCGTTGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAg < 2:321902/143‑1 (MQ=255) tcgagtcataccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAg > 2:726679‑M1/13‑143 (MQ=255) cttttACTTTCCAGCGTCGTACCGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTgg < 1:152563/148‑1 (MQ=255) ttACTTTCCGGCGTCGggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga < 1:509‑M1/149‑134 (MQ=255) ttACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga < 1:553‑M1/149‑134 (MQ=255) ttACTTTCCAGCGCCGggtgatgctgcccacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgga < 1:272280‑M1/149‑134 (MQ=255) ttACTTCCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGt < 1:1126605/149‑1 (MQ=255) attaccCCAGCGTCGTACAGCCTAACTTCTGGGGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCGGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCtt > 2:82817‑M1/7‑143 (MQ=255) tttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc > 1:939064‑M1/1‑12 (MQ=255) tttCCAGCGTCGTACAGCCTAACTTCTGGTGGCTTCTGGAAATTCGAAACTGTCTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGc < 1:1269568/149‑1 (MQ=255) tctCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGTCATTTAAGGTGCACGTTGGCTGGATGAGGCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGc < 1:1269677/147‑1 (MQ=255) ttCCCGCGTCGggtgatgccgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatca < 1:94846‑M1/149‑139 (MQ=255) ttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatca < 1:670187‑M1/149‑139 (MQ=255) ccAGCGTCGggtggtgctgccgacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac < 2:200269‑M1/143‑135 (MQ=255) cAGCGTCGggtgatgccgccaacttactgatttagtgtatgatggtgtgtttgaggtgctccagtggcttctgtgtctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg < 1:101867‑M1/149‑142 (MQ=255) cAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGAGGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTGGACTACATTCGTGCGGCACAGGGGCTTGGCGTCa > 2:742636/1‑143 (MQ=255) aGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggttcgtaacggcaaaagcaccgccggacatcagggc > 1:551877‑M1/1‑7 (MQ=255) gCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGc < 2:1049702/143‑1 (MQ=255) gTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggaactcac > 2:363926‑M1/1‑4 (MQ=255) tcgtACAGCCTAAGTTCTGGGGGCTGCTGGCAATTACGGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGAt < 2:215841/143‑1 (MQ=255) tcgtACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGt > 1:258323/1‑149 (MQ=255) tCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc > 1:410457‑M1/1‑3 (MQ=255) | CTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGTA > CP009273/2269199‑2269493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |