| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3576788 = | NA (NA) | 164 (1.010) | 102/296 | 0.3 | 97.0% | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA |
| ? | CP009273 | = 3649852 | 5 (0.030) | coding (249/333 nt) | hdeA | stress response protein acid‑resistance protein | |||||
Only 100 of 164 total aligned reads displayed.
ATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3576932‑3576788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAATATCTTCTTTAAA < CP009273/3649852‑3649705 ATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTT < 1:792926/149‑1 tcGCGCTGATGTGCGGCGGGGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTC < 1:2596538/147‑1 AGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCA < 2:1674067/149‑1 AGCGCTGAGGTCCGGCGGTGCTTTTGCCGTTACGCAGCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCA < 2:655098/149‑1 GCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAG < 1:1638494/149‑1 CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCCCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGG < 2:2000082/149‑1 CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGG < 1:217024/149‑1 ggtgcTGTCCGGCGGGTGTTTTGGCGTCACGGACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACCGCAGCCACTGGAGCATCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGC < 2:1042123/144‑1 cCTGATGGCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACTCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGC < 2:254354/148‑1 GCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGC < 1:2376922/149‑1 TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTT > 2:2229087/1‑149 TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGAATCAGCCGTTCAGGCct > 1:275073/1‑147 ccGCGGGGCTTTTGCCGTCACGCCCCCCTCCGTCAGGAGCTGAACATGAGGGACAGCTCATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACCAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCA < 1:1773545/147‑1 CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTta > 1:2371465/1‑147 GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAG < 1:725962/149‑1 GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAG < 1:2355997/149‑1 TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAA > 2:950551/1‑149 TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACA > 2:2163032/1‑149 TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACA > 2:1599096/1‑149 TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACA > 2:1510005/1‑149 TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAA < 1:2304425/149‑1 TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAA < 2:1538497/149‑1 TTTGCCGGTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAA < 2:990003/149‑1 TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGC < 2:401784/149‑1 TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGC < 2:903805/149‑1 TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGC < 1:1048019/149‑1 GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAA > 1:1455369/1‑149 GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAA > 2:943855/1‑149 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCGGGATAAACAAGCCAACTGTAAAG > 2:1927937/1‑149 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAG > 1:1508085/1‑149 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAG > 1:105811/1‑149 CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGAT > 2:2166778/1‑149 CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAA < 2:2152185/149‑1 CGTCAGTAACTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAACAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGCTAAAGT < 1:37037/149‑1 CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAA < 2:1371647/149‑1 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGgg > 2:862246/1‑147 TGAACAGGAGGGACAGCTGATAGCAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAA > 2:1401577/1‑149 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTGAAGGCGAAT > 2:80753/1‑149 GAGGGACAGCTGATAGAAACAGAAGCCACTGTAGCATTTCTATTTCACCTTCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAGGTTAAAGGCGAATGGGACA > 2:1881823/1‑149 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACA > 1:1585264/1‑149 GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACA > 2:2646027/1‑149 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGAGACAAAATT > 1:2124344/1‑149 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTA < 2:400271/149‑1 GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAG > 2:1556947/1‑149 CTGATAGAAACAGAAGCCACTGGCGCACCTCATTAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGA > 2:2644759/1‑149 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCGGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTACGA > 2:2019294/1‑149 GATAGAAACAGAAGGCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGTTTGTACACAGGATAAACAAGCCAACTTTAAAGAGAAAGTTAAAGGCGAATGGGACAAAATTAAGAAA < 2:272586/149‑1 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTCAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATA > 2:1051431/1‑149 AAACAGAAGCCACTGGCGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACCAAATTAAGAAAGATAT > 1:209485/1‑149 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATAT < 1:1028937/149‑1 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATAT > 2:950288/1‑149 AAACAGAAGCCACTGAAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGATGGCAGCATCACCCGTTAAGGCTTGAACTCAGGATAAGCAAGACAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATAa > 1:626016/1‑148 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATGACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATG < 1:1937355/149‑1 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGAGAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATG > 1:1367477/1‑149 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTC < 2:1647256/149‑1 GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATGAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCC > 1:1384177/1‑149 CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAAAAAGTACACTGTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCG > 2:1277494/1‑149 CCACGGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTTAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCG < 1:691449/149‑1 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACACAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGG > 1:2203255/1‑149 ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGG > 2:2216028/1‑149 TGGAGCACCTCAAAAACACCATCATACACTAAATCGGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGGTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAA > 1:2235815/1‑149 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAA > 1:824427/1‑149 gggGCACCTCAAACGCCCCATCATACCTTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGACATGTAATTCCGGGAAT < 1:2045507/146‑1 agCTCAAAAGCCCCAGCATACACTAACGCAGTAAGTCGACAGCATCACCCGTTCAGGGTTGTACTCAGGATAAACCAGCCAACTTTAAAGATAAAGTTAAAGGCGCAGGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTT < 1:1152668/147‑1 gCTCAAAGTCACTATCATTCTCGAAATCAGTCAGTGGCCAGAATCACCCGTCCAGGCTTGTACTCAGGATAAACAAGACAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGCAATTCCGGGAATGCGTTA < 1:1333473/148‑1 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTAC > 1:2650591/1‑149 taAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGAATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTCAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACA < 1:1285024/147‑1 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGGTAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGCTATGTAATTCCGGGAGTGCGTTACA > 2:1329210/1‑149 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACA < 1:65668/149‑1 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACA > 1:1137464/1‑149 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGT < 2:2212652/149‑1 AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGT < 2:2367080/149‑1 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTA > 1:1919455/1‑149 AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTA < 2:105811/149‑1 AACACCATCATACACGAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAACGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTA < 2:459242/149‑1 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACag > 1:2359710/1‑147 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATCTGTAATTCCGGGAATGCGTTACATTGTACTTCC < 2:1949481/149‑1 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCC > 2:2186980/1‑149 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCT < 2:2296831/149‑1 ATACACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGC < 2:1451396/149‑1 CACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATA > 2:366042/1‑149 ACTAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGAATAAAAAACCCAACTTTAAAGATACAGTAAAAGGCGAATGGAACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGCTACATCGTACTTCCacccatat > 2:2049030/1‑141 CTAAATCAGTGAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTCAAGACAAGGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTCCATCGTACTTCCTTGCATATT > 1:1617682/1‑149 TAAATCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTG > 1:728802/1‑149 TAAATCAGCAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGTATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTG < 1:365457/149‑1 acTCAGTTAGGTGGCAGCACCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAA < 1:1510005/147‑1 AATGAGGAAGGTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAA < 1:1051431/149‑1 TCAGTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACA > 1:179769/1‑149 GTAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGC > 1:860543/1‑149 TAAGTTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCC > 2:1543625/1‑149 GTTGGCAGTATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGA < 2:1990201/149‑1 TTGGTAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGAGATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAA > 2:772443/1‑149 TTGGCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTGAAGAGAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAA > 2:2081202/1‑149 GCAGCATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAATgt > 2:2451089/1‑147 CAGCATCACCCGTTCAGGCTTGTACTCAGGGTAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACCAACTTAAGAAAGATATTTCATTCCGGGAATGCGTTACATCGTGCTTACTTGCATATTGAGCAGGCGGGAGTATC > 2:408828/1‑149 gATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAATATCTTC < 1:437690/148‑1 CATCACCCGTTCCGGTCTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATGAAGAAAGATCTGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAATATCTTC < 2:1089235/149‑1 CATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAATATCTTC < 1:2061664/149‑1 CATCACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAATATCTTC < 2:1585264/149‑1 ACCCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACATGCCGGCATATCTTCGTTA > 2:2474891/1‑149 ATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3576932‑3576788‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAATTCCGGGAATGCGTTACATCGTACTTCCTTGCATATTGAACAGGCCGGAATATCTTCTTTAAA < CP009273/3649852‑3649705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |