New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	277607 =	73 (1.110)	5 (0.080)	5/276	8.8	7.0%	coding (88/1155 nt)	yagA	CP4‑6 prophage; putative DNA‑binding transcriptional regulator
	?	CP009273	277634 =	64 (1.030)					coding (61/1155 nt)	yagA	CP4‑6 prophage; putative DNA‑binding transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGGTGCGGAATGCGCGGGCGGTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAAGGG  >  CP009273/277492‑277781                                                                                                                                               |                                                                                                                                                    tGGTGCGGAATGCGCGGGCGGTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGaacaaa                                                                                                                                                    <  2:911702/144‑1 (MQ=255) tGGTGCGGAATGCGCGGGCGGGCCTGAAGACCGGCGGTACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAacaaaacaaa                                                                                                                                               <  1:814028/149‑1 (MQ=255)   gTGCGGAATGCGCGGGCGGTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGaacaaaac                                                                                                                                                  <  2:575660/144‑1 (MQ=255)      cGGAATGCGCGGGCGGTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGTTGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAg                                                                                                                                          >  1:775081/1‑149 (MQ=255)         aaTGCGCGGGCGGTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTc                                                                                                                                            >  2:847501/1‑144 (MQ=255)             cgcgGGCGGTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTaa                                                                                                                                   <  1:1013022/149‑1 (MQ=255)              gcgggcggTGCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAAt                                                                                                                                  <  1:481736/149‑1 (MQ=255)                    ggTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGAAATg                                                                                                                            >  1:6055/1‑149 (MQ=255)                        cTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAACCAAACTCAGTACGAAATGACATGGtgg                                                                                                                        >  1:8921/1‑147 (MQ=255)                         tGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATg                                                                                                                            <  2:740193/144‑1 (MQ=255)                            agcgcggcggCATCTTCCTGAGCCCAGCGCGGGAGCCATTTTTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGACCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTAtctct                                                                                                                    <  1:277882/145‑1 (MQ=255)                            aGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGGGCCATTTTTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTAtctct                                                                                                                    <  1:865231/149‑1 (MQ=255)                             gACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCTGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTAt                                                                                                                        <  2:639222/144‑1 (MQ=255)                               ccGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCCCTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACCCAGTACGTAATGACATGGTATCTCTCGc                                                                                                                 <  1:881973/149‑1 (MQ=255)                                 ggcggcACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTAtctct                                                                                                                    <  2:984472/144‑1 (MQ=255)                                      cACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGCCATGGTATCTCTCGCAt                                                                                                               <  2:587339/144‑1 (MQ=255)                                      cACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAg                                                                                                          <  1:143881/149‑1 (MQ=255)                                          ttCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCCGGGCa                                                                                                      >  1:274367/1‑149 (MQ=255)                                           tccggcgCCCAGCGCTGGAGCCACTTGCAGCCGGTGGCAGGTGAAATGCCGCCGCGACGCCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCAt                                                                                                     <  1:260592/143‑1 (MQ=255)                                           tCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGcct                                                                                                     >  1:69495/1‑147 (MQ=255)                                           gccTGAGCCCTGCGCGGGGGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAg                                                                                                          <  2:950181/143‑1 (MQ=255)                                               gAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGc                                                                                                 <  1:369988/149‑1 (MQ=255)                                                  cccAGCGCTGGAGCCACTTGTAGCCGGTGAAACGATTAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATaa                                                                                                   >  2:991894/1‑144 (MQ=255)                                                   ccggcggTGGGGCCACTTGTAGGCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGGCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACt                                                                                             <  1:530631/146‑1 (MQ=255)                                                   ccAGCGCTGGAGCCACTTGTAGCCGGTGGCAGCTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACt                                                                                             <  1:18475/149‑1 (MQ=255)                                                    cAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGGGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGc                                                                                                 >  2:608670/1‑144 (MQ=255)                                                    cAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAAAGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTc                                                                                            <  1:483722/149‑1 (MQ=255)                                                    cAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTAAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTc                                                                                            >  1:820398/1‑149 (MQ=255)                                                          ttgggCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTcc                                                                                           <  2:499043/140‑1 (MQ=255)                                                          tGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGATATCTCTCGCATCCCAGGGCATAAGCGACTCCATaaa                                                                                      <  1:725704/149‑1 (MQ=255)                                                             aGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGAAGAGGGAACGGATGTTCGCCCCGTCCGGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACgg                                                                                   <  1:885641/149‑1 (MQ=255)                                                               ccACTTGTAGCCGGTGGCAGGTGAACTGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATaaa                                                                                      >  2:317804/1‑144 (MQ=255)                                                                 aCTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTTAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTc                                                                               <  1:552272/149‑1 (MQ=255)                                                                 aCTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACg                                                                                    <  2:896755/144‑1 (MQ=255)                                                                 aCTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTc                                                                               <  1:196576/149‑1 (MQ=255)                                                                    tGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTa                                                                            <  1:899271/149‑1 (MQ=255)                                                                        gCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGcc                                                                        >  1:662529/1‑149 (MQ=255)                                                                         ccGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGCGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAGGCGACTCCATAAACGGGTTCttc                                                                            >  2:437891/1‑143 (MQ=255)                                                                         ccGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTa                                                                            >  2:425052/1‑144 (MQ=255)                                                                          cGGTGGCCGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGCCTCCATAAACGGGTTCTTAt                                                                           <  2:595916/144‑1 (MQ=255)                                                                           ggTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCGGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATg                                                                          <  2:351863/144‑1 (MQ=255)                                                                                  ggTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAACCTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTaa                                                              <  1:601795/149‑1 (MQ=255)                                                                                  ggTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTCGTTGTaa                                                              >  1:328913/1‑149 (MQ=255)                                                                                  ggTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTaa                                                              <  1:55603/149‑1 (MQ=255)                                                                                   gTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCACTACGTAATGACATGGTATCCCTCGCATCCCAGGGCATAAGCGACCCCATAAACGGGCTCTTATGCCCTCGtt                                                                  >  2:21197/1‑144 (MQ=255)                                                                                             gAAGCGACGGCAGAGGGAAGGGATGTTCGCCCCGTCGTGCGAGGCGAAAAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCt                                                        <  2:703532/144‑1 (MQ=255)                                                                                             gAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCt                                                        <  2:527224/144‑1 (MQ=255)                                                                                                 cGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAACCTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTcc                                               <  1:1024726/149‑1 (MQ=255)                                                                                                 cGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCa                                                    >  2:900303/1‑144 (MQ=255)                                                                                                   aCGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCGTATCAACCCGAAATCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTcccc                                             >  1:1099146/1‑149 (MQ=255)                                                                                                   aCGGCAGAGGGAACGGATGTCCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTTATTACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTcccc                                             <  1:539973/149‑1 (MQ=255)                                                                                                     ggCAGGGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTc                                                <  2:239666/144‑1 (MQ=255)                                                                                                      gCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTcc                                               >  2:531056/1‑144 (MQ=255)                                                                                                      gCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGaa                                          <  1:926168/149‑1 (MQ=255)                                                                                                           gggAACGGATGTTCGCCCCGCCCTGCGAGGCGAACAAAACAAACTCAGTACTTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAgt                                     <  1:869073/149‑1 (MQ=255)                                                                                                                cgcaTGTTCGCCCCGTCCTTCGGGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTCTGACTCGGGTGTAAGTGTCTACCATGTCCCCGAACAAgt                                     <  2:724604/141‑1 (MQ=255)                                                                                                                  gATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAgtgt                                   >  2:328119/1‑144 (MQ=255)                                                                                                                  gATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACt                              <  1:785479/149‑1 (MQ=255)                                                                                                                         gCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTccc                       >  1:1020778/1‑149 (MQ=255)                                                                                                                            ccGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTc                         >  2:335452/1‑144 (MQ=255)                                                                                                                                  tGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGa                   >  2:467899/1‑144 (MQ=255)                                                                                                                                   gCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGCACAAGTGTTCACTATGTCCCCGGACCGTac             >  1:251683/1‑149 (MQ=255)                                                                                                                                     gAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTacac           >  1:1086495/1‑149 (MQ=255)                                                                                                                                      aGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACAcc          >  1:469969/1‑149 (MQ=255)                                                                                                                                        gCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTac             >  2:748578/1‑144 (MQ=255)                                                                                                                                         ccaacaaaacaaACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTaca            <  2:197297/142‑1 (MQ=255)                                                                                                                                              aaaacaaaCTCAGAACGTAATAACATGGTATCTCTCGCATCCCAGGGCATAAGCGGCTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCTAACAACTGTTCACTATGTCCCCGGCCCGTACACCCCAACggg  >  1:793093/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                    TGGTGCGGAATGCGCGGGCGGTCCTGAAGACCGGCGGCACCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAAGGG  >  CP009273/277492‑277781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.