| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | CP009273 | 2,400,257 | IS5 (+) +4 bp | intergenic (‑137/‑780) | lrhA ← / → alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 45 (0.650) | 39/290 | 1.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 2400257 = | 0 (0.000) | intergenic (‑137/‑783) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 69 (1.000) | 56/290 | 0.2 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 2400260 | 0 (0.000) | intergenic (‑140/‑780) | lrhA/alaA | transcriptional repressor of flagellar, motility and chemotaxis genes/valine‑pyruvate aminotransferase 2 | |||||
Only 100 of 115 total aligned reads displayed.
TTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTC > CP009273/2400114‑2400404 | ttATCATATATTATCACTTACTGGCGGCGCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAgg > 2:110174‑M2/1‑147 (MQ=255) tatatTATCACTTACTGGCGGCTAATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCAGGCAGTTTCATCAGGGACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAgg < 1:739203‑M2/143‑3 (MQ=255) ttatCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaagg > 1:1053200‑M2/1‑137 (MQ=255) tatCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAACGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaac < 2:850591‑M2/149‑14 (MQ=255) tCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaa < 2:409220‑M2/149‑16 (MQ=255) ttaaatggcgaagaaacgggctaaagaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgcatgaggcacccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACAtt < 2:631087‑M2/20‑1 (MQ=255) cTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgccaa < 1:267601‑M2/143‑13 (MQ=255) aaggacgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaacttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGtt < 2:331567‑M2/23‑1 (MQ=255) aCTGGCGGCTCATACTGAGCTGGTTAATGCCGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccct > 2:295068‑M2/1‑128 (MQ=255) gcggcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCACTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGCAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgata < 2:233998‑M2/149‑26 (MQ=255) gcTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatga > 2:1024445‑M2/1‑121 (MQ=255) aacggtttaaataggctgattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGtt < 1:1018954‑M2/28‑1 (MQ=255) aacggtctaaataggctgattcagggcagttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATg > 2:656785‑M2/116‑149 (MQ=255) ggtctaaatagggtgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgacggagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTtata < 1:22034‑M2/31‑1 (MQ=255) tctaaataggctgattcaaggcattgacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGa > 2:598552‑M2/111‑149 (MQ=255) ggaGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGGGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgaga > 1:642789‑M2/2‑113 (MQ=255) aataggctgattcaaggcatttacgggagataaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTa > 2:623759‑M2/107‑149 (MQ=255) aacaggcggatgtaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTa < 2:1024798‑M2/43‑1 (MQ=255) gTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGAAACCCGGCCGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatcaggtcaggtttgtcat < 2:1011882‑M2/149‑44 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGt > 1:460434‑M2/102‑143 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATcaca < 2:62249‑M2/50‑1 (MQ=255) tGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAcgaaggtgcgaacaagtacctgataagagaacaagtttgtaatctgaa < 2:56632‑M2/149‑49 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAat > 2:163341‑M2/96‑149 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacaggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATca < 1:987806‑M2/48‑1 (MQ=255) cTGTGCACACACAAACAAGCAATTCCATTTCTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgataggagatcatgtttgtcatctggaac < 2:620254‑M2/149‑51 (MQ=255) tgtgCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc > 2:295898‑M2/1‑98 (MQ=255) tgtgCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc < 2:699849‑M2/149‑52 (MQ=255) tgCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAgggaggtgcgcacaggtccctgatatgagatcatgtttgtcatcgggagccat < 2:984481‑M2/149‑54 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagactttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAGTGCCTGAAGTAGATCACAGAatata > 2:719984‑M2/93‑149 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAg > 1:82133‑M2/93‑143 (MQ=255) acacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttggcatctggagc < 1:895564‑M2/143‑51 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAata > 1:618780‑M2/89‑143 (MQ=255) acacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgggaacaagtccctgatatgagatcgtgtttgtcatctggagccataaaac < 2:305893‑M2/149‑59 (MQ=255) acacaAACAAGCAATTCCATTTGTAATGTGCCTAGTTACCTGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 2:872002‑M2/149‑59 (MQ=255) acaaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag > 2:269415‑M2/1‑89 (MQ=255) acaaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata > 1:332421‑M2/1‑89 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAACCGACTCACATAGGTCCGTTATAATCCCTGAAGTAAACCACAAAATAAATCtt > 1:84087‑M2/83‑143 (MQ=255) aacaaGCAATTCCATTTGTAATGTGCCCCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAACTGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 2:547365‑M2/1‑86 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTc > 1:920497‑M2/82‑143 (MQ=255) ggagaaaaaaccggctcaaacatgaagaaatgaaatgcctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGACGTAGCTCACAGAATATATCTTCAGGGAt < 2:774642‑M2/68‑1 (MQ=255) acaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtaatctggagccatagacaagggtt < 2:745189‑M2/149‑65 (MQ=255) gCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTACggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:945071‑M2/1‑81 (MQ=255) gCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:1007477‑M2/143‑63 (MQ=255) ccattCCATTTGTAATGCGCCTCCCTGGCAGTTTCAGCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 1:675004‑M2/3‑80 (MQ=255) cAATTCGATTTGGAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCCCTAAggaaggtgcgaacaagttcctgttatttgttcatgtttgtcatcttgagccatagtacagtgt > 1:98488‑M2/1‑80 (MQ=255) cAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACACGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcaggtttgtcatctggagccatagaacagggc < 1:201887‑M2/143‑64 (MQ=255) cAATTCCATTTGTAATGTGCCGCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 2:396491‑M2/1‑80 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCat > 2:295690‑M2/77‑149 (MQ=255) aatggcatgtgTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt < 1:666522‑M2/138‑65 (MQ=255) aaTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgggatcatgtttgtcatctggagccatagaacaggggtcatcat < 2:490435‑M2/149‑71 (MQ=255) aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCgcatgt > 2:352830‑M2/75‑147 (MQ=255) aTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc > 1:884038‑M2/1‑78 (MQ=255) ttCCATTTGTAATGTGCCTCCCTGGCCGTATAATCCGTTTCGCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:516488‑M2/1‑77 (MQ=255) ttCCATTTGTAATGTGCCGCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:75071‑M2/1‑77 (MQ=255) ttCCATCTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGTATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 2:584794‑M2/1‑77 (MQ=255) gccaTTTTGAATGTACCTAGGTGGTAGTCTCATCCGAAACCCGGACGAAAGGAAAAACGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 1:985980‑M2/2‑76 (MQ=255) cATTTGGAATGTGCCTCCCTGGCAGTTTCATCCGGGACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatctgagatcatgtttgtcatctggagccatagaacagggttcatcgtgagtc > 2:812732‑M2/1‑74 (MQ=255) ttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 2:715570‑M2/149‑79 (MQ=255) gtgTAATGTGCCTCACTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:801406‑M2/2‑71 (MQ=255) gTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATCTGAGTTGCACTAAggaaggtgcgaacacgtccctgatatgggatcatgtttgtcatctggagccatagaacagggttcatcatgcgt < 1:493314‑M2/143‑75 (MQ=255) aTGTGCCTCCCTGGCAGTTGCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt > 2:908087‑M2/1‑66 (MQ=255) aTGTCCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATTAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt > 2:426247‑M2/1‑66 (MQ=255) tgtgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta < 2:528826‑M2/149‑85 (MQ=255) catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTaa < 1:806589‑M2/82‑1 (MQ=255) gtgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 2:752015‑M2/149‑86 (MQ=255) tgaagaaatgaaatgactgagtccgccttcaagaagttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGt < 1:586931‑M2/84‑1 (MQ=255) ccTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact < 1:482947‑M2/143‑83 (MQ=255) aagaaatggaatgacggagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTa < 1:166287‑M2/86‑1 (MQ=255) aagaaatgatatgactgagtcagccgagaagcatttccccgcttattcgcacctgccCTAAAAAAGCGACTCACATTGTTTCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTa < 1:838397‑M2/86‑1 (MQ=255) cccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcgtctggagccatagaacagggttcatcatgagtcatcaacttac > 1:102873‑M2/1‑58 (MQ=255) cccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 2:250066‑M2/1‑58 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTactcactc < 1:1084274‑M2/93‑1 (MQ=255) gaaatgactgagccacccaaaaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTactcactc < 1:484217‑M2/93‑1 (MQ=255) tttCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga < 2:606385‑M2/149‑101 (MQ=255) tttCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga > 1:338893‑M2/1‑49 (MQ=255) tttCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGCTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga < 1:850193‑M2/143‑95 (MQ=255) ctgggtaagccgagaagaatttccccgcttatccgtaccttccCTAAACAAGCGACTCACTTTGTTCCGTTACAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATCTCTATTAAGTTACTCACTCTTTTCTa < 1:419474‑M2/100‑1 (MQ=255) agtcagccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACa > 2:203890‑M2/41‑149 (MQ=255) ggACCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat > 1:912568‑M2/1‑41 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGa > 1:87299‑M2/37‑143 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATgcgc < 2:210904‑M2/114‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACa > 1:343012‑M2/35‑143 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACAt > 1:338857‑M2/34‑143 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCgt < 2:382809‑M2/116‑1 (MQ=255) ccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc < 1:234073‑M2/143‑108 (MQ=255) ataagaatttccctgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGAGCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATgc < 1:482406‑M2/112‑1 (MQ=255) gaagattttaccctcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATCAAGAAGTTGATACTCACTCTTTTCTATTTATGACATgcg < 1:236254‑M2/113‑1 (MQ=255) aagaatttccccgcttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGttt < 2:90595‑M2/120‑1 (MQ=255) gaatttccccgcttactcgcacctaccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACatgcgctt < 1:487426‑M2/116‑3 (MQ=255) cgcacgtaaaaATGCATAGGAGTTTCACTAAggagggtgcgaacaagttcctgataggatatcatgtttgtcatctggtgccatagaacagggttcatcaggagtcctcaacttaccttcgccgacagtgaattcagcagtaa > 1:839534‑M2/6‑31 (MQ=255) gAAAGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag > 1:536735‑M2/1‑30 (MQ=255) aaaGTAAAAATGGATATGAGGTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc > 1:1051222‑M2/1‑29 (MQ=255) aaaGTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc > 1:109189‑M2/1‑29 (MQ=255) gTAAAAATGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc > 1:369488‑M2/1‑26 (MQ=255) aaTGCATATGAGTTGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcaactggagccatagaacaggggtcatcatgagtcatcaacttaccttcgccgacagtgaattcagccgtaagcgccgccag < 1:642362‑M2/143‑123 (MQ=255) cttattcgcaccttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTAtaaatgtaaa < 2:1002821‑M2/133‑1 (MQ=255) ttccCTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTg < 2:41272‑M2/145‑1 (MQ=255) tGCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcacaccagaaaagagattttct > 2:859474‑M2/1‑8 (MQ=255) aCTCAggaaggtgcgaacaagtcccgtatatgagatcatgtttgccatctggagccatagcacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt > 2:377315‑M2/1‑5 (MQ=255) cTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATAGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATTTGAGTCCt > 1:176598/1‑143 (MQ=255) | TTATCATATATTATCACTTACTGGCGGCTCATACTGAGCTGGTTAATGCTGTGCACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGATCACAGAATATATCTTCAGGGATCGCATATCTATTAAGTTACTCACTCTTTTCTATTTATGACATGCGCGTGTTTGTATAAATGTAAATGTGAGTCCTTGTTC > CP009273/2400114‑2400404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |