New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3224767145 (1.290)6 (0.060) 6/280 14.9 4.0% noncoding (157/283 nt) REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences
?CP009273 = 3224786 145 (1.340)noncoding (176/283 nt) REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 148 total aligned reads displayed.

CTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAA  >  CP009273/3224641‑3224931
                                                                                                                                                 |                                                                                                                                                  
cTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATc                                                                                                                                                 <  1:1849624/149‑1 (MQ=255)
  aCATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCg                                                                                                                                               <  1:1840224/149‑1 (MQ=255)
  aCAGGTTCAATCGCCCGGGCCGGATAAAACGCGGCAAGCGTTGCAGCCGGCAACTTCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCg                                                                                                                                               <  1:1335758/149‑1 (MQ=18)
      gtgCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCAt                                                                                                                                           >  1:1040305/1‑149 (MQ=255)
      gtgCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCAt                                                                                                                                           >  1:1039971/1‑149 (MQ=255)
                      cGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTg                                                                                                                           >  1:1040332/1‑149 (MQ=255)
                      cGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTAGGATATGACGCGACAAGCGGCGCATCCGGCATCTGCACCGCGCCACTg                                                                                                                           >  1:148327/1‑149 (MQ=255)
                              aCGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTgac                                                                                                                         >  2:824195/1‑141 (MQ=255)
                              aCGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGc                                                                                                                         >  2:219711/1‑143 (MQ=255)
                              aCGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGc                                                                                                                         <  2:690985/143‑1 (MQ=255)
                               cgcgGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCg                                                                                                                        >  2:610141/1‑143 (MQ=255)
                               cgcgGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcg                                                                                                                  <  1:1899420/149‑1 (MQ=255)
                                  ggCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACACGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcggcg                                                                                                               <  1:1693177/149‑1 (MQ=255)
                                    cAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGGGCGACTGGGGGTTgg                                                                                                                   >  2:821621/1‑142 (MQ=255)
                                      aGCGTTGCCTCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcgg                                                                                                                 <  2:548182/143‑1 (MQ=255)
                                      aGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATgcgg                                                                                                                 >  2:1730081/1‑143 (MQ=255)
                                         gTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCGTCTGCACCCCGCCCCTGGCGGATgcggctg                                                                                                              >  2:351874/1‑141 (MQ=255)
                                         gTTGCATCCGGCAACTGCACCGCGCCACTGGCGCATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGCAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGc                                                                                                        <  1:641527/149‑1 (MQ=255)
                                         gTTGCAGCCGGCAACTGGACCGCGCCACGGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGc                                                                                                        <  1:328841/149‑1 (MQ=255)
                                          ttGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGCCGTCTGCACCGCGCCCCTGGCGGGTgcggcggg                                                                                                             >  2:1056382/1‑141 (MQ=255)
                                          ttGCACCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTg                                                                                                             <  2:557072/143‑1 (MQ=255)
                                           tGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCt                                                                                                      <  1:696675/149‑1 (MQ=255)
                                            gCATCCGGCAACTGTACCGCGCCACTGGCCGATGCGGCGTGAACGTCTTATCCGCCCTACTTGTGTGTCCCCGTAGGTCGTATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGa                                                                                                           <  2:128257/143‑1 (MQ=21)
                                             cacccGGCAACTGCACCGCGCCCCCGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGAc                                                                                                          <  2:681671/140‑1 (MQ=255)
                                             cATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGAc                                                                                                          <  2:761989/143‑1 (MQ=255)
                                             cATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTa                                                                                                    <  1:835117/149‑1 (MQ=255)
                                             cATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGCCGGATAAGACGCGACAAGCGTCGCATCCGGCATCCGCACCGCGCCCCTGCCGGACccggccccgac                                                                                                          >  2:256423/1‑137 (MQ=17)
                                                ccGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGCTGCGGCGTGGACGCCTTATcc                                                                                                 >  1:304449/1‑149 (MQ=255)
                                                    cAACCGCCCCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGccc                                                                                             <  1:123922/149‑1 (MQ=255)
                                                      aCTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTCCACCGCGCCACTGGGGGAGGCGGCGGGGGCGCCTTTTcc                                                                                                 >  2:463684/1‑143 (MQ=21)
                                                         cgtccgcgccgcgGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGcc                                                                                              <  2:439200/140‑1 (MQ=255)
                                                           tccGCGCGCCGGGCGGATGCGGCGTGCACGCCTTATCCGCCCTACATGTGCGTTCCCGTAGGCCGGAGAAGTCGCGCCAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCt                                                                                            <  2:288240/142‑1 (MQ=14)
                                                           aCCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGCCGCCTTATCCGCCCt                                                                                            >  2:1523299/1‑143 (MQ=255)
                                                           aCCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCt                                                                                            <  2:879646/143‑1 (MQ=255)
                                                           aCCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGGCGCATCCGGCATCTGCACCGCGCCACTGGCGGGTGCGGCGTGGACGCCTTATCCGCCCt                                                                                            >  2:966808/1‑143 (MQ=255)
                                                             cgcgCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGATCCCGTAGGTCGGATAAAACGCGACAAGCGTCGCATCCGGCGTCTGCACCGGGCGACTTGCTGTTGCGGCCCGGCCCCCCTGTCCGCCCGAc                                                                                          >  2:210658/1‑143 (MQ=17)
                                                              gcgcCTCTGGCGGTTGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACa                                                                                         <  2:1626110/143‑1 (MQ=255)
                                                                 ccgcTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgt                                                                                      <  2:1167433/140‑1 (MQ=255)
                                                                 ccACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgt                                                                                      <  2:780535/143‑1 (MQ=255)
                                                                  cACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGGCAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGCCGGATGCGGCGTGGACGCCTTATCCGCCCTACATTTGCAATTc                                                                               >  1:57219/1‑149 (MQ=255)
                                                                  cACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGCCGCCTCACCCCCCCCCCAtgtc                                                                                     >  2:1217215/1‑142 (MQ=18)
                                                                  cACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACCtgtg                                                                                     >  2:243084/1‑143 (MQ=255)
                                                                  cACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACAtgtg                                                                                     <  2:740700/143‑1 (MQ=255)
                                                                   aCTGGCGGATGCGGCTGGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCACCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTcc                                                                              <  1:898442/149‑1 (MQ=255)
                                                                   aCTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGc                                                                                    <  2:1545191/143‑1 (MQ=255)
                                                                        cGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTCGACGCCCTGACCGCCCTACATGAGccagccctgaac                                                                         >  1:1380185/1‑138 (MQ=18)
                                                                          gaggcggcgTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCt                                                                       <  1:734407/146‑1 (MQ=255)
                                                                           aTGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTg                                                                      <  1:619140/149‑1 (MQ=255)
                                                                             gcggcgGGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTaa                                                                          <  2:5194/143‑1 (MQ=255)
                                                                              cggcgTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTACGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAAc                                                                         <  2:1242094/143‑1 (MQ=255)
                                                                                  gTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTgg                                                                     >  2:314019/1‑143 (MQ=255)
                                                                                    gAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGAGGCACCAAGCTGCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAAcg                                                             <  1:1389341/149‑1 (MQ=18)
                                                                                    gAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTggct                                                                   >  2:1594574/1‑141 (MQ=255)
                                                                                    gAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGGGGACGCCTTATTCGCCCTACATGTGCAATTCCGTAACCTGGATAAAAcg                                                             >  1:615646/1‑149 (MQ=255)
                                                                                     aaCGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGAGCAATTCCGTAACCTGGATa                                                                  >  2:645906/1‑143 (MQ=255)
                                                                                       cGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATaaa                                                                <  2:1390561/143‑1 (MQ=255)
                                                                                       cGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATaaa                                                                >  2:650981/1‑143 (MQ=255)
                                                                                       cGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGa                                                         <  1:1822243/149‑1 (MQ=255)
                                                                                           ttATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGCGCAATTCCGTAACCTGGATAAACcg‑c                                                           >  2:1083801/1‑143 (MQ=255)
                                                                                            tATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGc                                                    <  1:1507121/149‑1 (MQ=255)
                                                                                              tCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGt                                                  <  1:595019/149‑1 (MQ=255)
                                                                                              tCCGCCCTACATGTGTGTTCCCGTAGGTCGCATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGAc                                                        <  2:884502/143‑1 (MQ=255)
                                                                                               ccGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTc                                                 <  1:505121/149‑1 (MQ=255)
                                                                                               ccGCCCTACATGTGTGTCCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTc                                                 <  1:531627/149‑1 (MQ=255)
                                                                                                cGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCGCCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATACCGTAACCTGGATAAAACG‑CGACAAGCGTCg                                                >  1:1277908/1‑149 (MQ=255)
                                                                                                cGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCg                                                >  1:338977/1‑149 (MQ=255)
                                                                                                cGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCg                                                >  1:1242433/1‑149 (MQ=255)
                                                                                                 gCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTACACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCCATTCCGTCACCGGGATAAAACG‑CGACAAGCGTCGc                                               >  1:1114463/1‑149 (MQ=255)
                                                                                                    cTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCGGTGACCTGGATAGAACGCCGAC‑Agcgtcgcgtc                                            >  1:549043/1‑149 (MQ=18)
                                                                                                            gtgtTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCg                                          >  2:1720800/1‑143 (MQ=255)
                                                                                                               ttCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCg                                       >  2:1461428/1‑143 (MQ=255)
                                                                                                               ttCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCa                                 >  1:20031/1‑149 (MQ=255)
                                                                                                                ccccGTAGGTCGGATAAGACGCGACAAGCGCCGCATCAGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATccctctt                                      <  2:728931/142‑6 (MQ=255)
                                                                                                                 cccGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCAcc                               >  1:1893420/1‑149 (MQ=255)
                                                                                                                  ccGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCCTGGACGCCTTAGCCGCCCTACATGTGCAATTCCGTAACCTGGGTGAAACG‑CGACAAGCGTCGACTCCGGCGTTa                                    >  2:1426300/1‑143 (MQ=21)
                                                                                                                  ccGTAGGACGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTa                                    >  2:1193811/1‑143 (MQ=255)
                                                                                                                   cGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCgg                             <  1:1106452/149‑1 (MQ=255)
                                                                                                                    gTAGGTCGGATAAGACGCGACGAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCggg                            <  1:946019/149‑1 (MQ=255)
                                                                                                                     tAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGc                           <  1:239941/149‑1 (MQ=255)
                                                                                                                       gggcGGATAAGGCGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATCAAACG‑CGACAAGCGTCGCCTCCGGCGTTATCAcc                               >  2:520469/4‑143 (MQ=255)
                                                                                                                       ggTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGGTAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGt                         >  1:74592/1‑149 (MQ=255)
                                                                                                                          cGGATAAGGCGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCggg                            <  2:607350/143‑1 (MQ=255)
                                                                                                                          cGGATAAGACCCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTAGATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTAtt                      <  1:1173714/149‑1 (MQ=255)
                                                                                                                            gATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGAAGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCCTAttat                    >  1:843240/1‑147 (MQ=255)
                                                                                                                               aaGACGCGACAAGCGTCGCATCCGGCATCTGCCCCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCtttt                 <  1:1431415/149‑1 (MQ=255)
                                                                                                                               aaGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCtttt                 <  1:1713035/149‑1 (MQ=255)
                                                                                                                                   cgcgACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCtt                   >  2:1031122/1‑143 (MQ=255)
                                                                                                                                   cgcgACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGaa             <  1:721512/149‑1 (MQ=255)
                                                                                                                                     cgACAAGCGTCGCATCCGGCATCTGCCCCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCtttt                 <  2:1116906/143‑1 (MQ=255)
                                                                                                                                     cgACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCtttt                 <  2:135793/143‑1 (MQ=255)
                                                                                                                                      gACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATcc          >  1:881132/1‑149 (MQ=255)
                                                                                                                                        cAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCa        <  1:108863/149‑1 (MQ=255)
                                                                                                                                         aaGCGTCGCATCCGGCATCTGCCCCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCCCCCTACATGCGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGaa             <  2:1056075/143‑1 (MQ=255)
                                                                                                                                         aaGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCAt       <  1:264813/149‑1 (MQ=255)
                                                                                                                                          aGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATc      <  1:670035/149‑1 (MQ=255)
                                                                                                                                            cGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATcc          >  2:1505240/1‑143 (MQ=255)
                                                                                                                                            cGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATcac    >  1:142852/1‑149 (MQ=255)
                                                                                                                                            cGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAAAATGGATAGGGCG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATcac    >  1:448571/1‑149 (MQ=25)
                                                                                                                                             gTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATccc         <  2:1369832/143‑1 (MQ=255)
                                                                                                                                             gTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTAACCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATccc         >  2:933610/1‑143 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGTGTTCCCGTAGGTCGGATAAGACGCGACAAGCGTCGCATCCGGCATCTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTTATCCGCCCTACATGTGCAATTCCGTAACCTGGATAAAACG‑CGACAAGCGTCGCATCCGGCGTTATCACCGGGCGTATTCTTTTTGAATCCCATCACAA  >  CP009273/3224641‑3224931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.