| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2269346 | 2 (0.040) | 53 (1.120) | 46/296 | 0.1 | 96.4% | coding (595/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 3576788 = | NA (NA) | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA | |||||
TGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGT > CP009273/2269200‑2269492 | tGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTACAGTCGATCTCTGGGGCCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCAGTTTTTGATTATTTTACTTTCCAGCGTCGgg > 2:261533‑M1/1‑147 (MQ=255)cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttcttaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCCGCGTCGTa < 1:35425‑M1/11‑1 (MQ=255)cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTa < 1:369078‑M1/11‑1 (MQ=255) taacctgaatctgaggcagcaccgggcacggctgggacggaagtcgctgtctttctcaaaatcggtggagctgcatgataaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACa > 2:591821‑M1/137‑149 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCt < 2:611080‑M1/17‑1 (MQ=255) ctGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtggtgct > 2:487827‑M1/1‑140 (MQ=255) tGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctg > 1:603035‑M1/1‑139 (MQ=255) ggatctgaggcagcgtctggcagggctgggacggaagtcgctgtcgtcctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTaa > 2:543651‑M1/131‑149 (MQ=255) gTTCCGGCGTGATGGGGGTGCTGGGGTGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGTAGACCGCTTTATTGATGTATGTTCGGGGATGCGCACGCTGTTTTTGATTCTTTTACTTTCCAGCGTCGggtgatgctgc < 1:375797‑M1/149‑12 (MQ=255) gTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgc > 2:127139‑M1/1‑138 (MQ=255) ttCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACACGGCTATTACGGCGGTAAAGTCGATCTCTGGGGCCAACGCTTTATTGACGTATGTCCGGGGATGCCGACGCTGTTTTTGATTCTTTTACTTTCCAGCGTCGgctgaggctgcc > 1:257875‑M1/1‑137 (MQ=255) tctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcctcgggcattatctgaacataaaacactatcaataagttggaggcattaccCCAGCGTCGTACAGCCGAACtt < 2:303125‑M1/22‑1 (MQ=255) aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcgttaccCCAGCGTCGTACAGCCTAACTTCtgg > 1:272403‑M1/124‑149 (MQ=255) agcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGgc < 1:408111‑M1/30‑1 (MQ=255) aTGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactga < 1:758903‑M1/149‑23 (MQ=255) ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg < 1:690930‑M1/35‑1 (MQ=255) ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtaattaccCCAGCGTCGTACAGCCGAACTGCTGGTGGcggctg < 1:504308‑M1/35‑1 (MQ=255) cGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTGAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTCTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccgacttactgctttcg > 1:480067‑M1/1‑122 (MQ=255) cGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttag > 2:341385‑M1/1‑122 (MQ=255) gTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagt < 2:603035‑M1/149‑29 (MQ=255) gTGCGGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagt < 2:369064‑M1/149‑29 (MQ=255) tGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAGGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtg > 2:685165‑M1/1‑120 (MQ=255) tGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGACGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacatactgattaagtg > 2:118682‑M1/1‑120 (MQ=255) ggCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAAAGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTCCTTTCCAGCGTCTggtgagtgtgccaacttactgattttgtttatg > 1:163587‑M1/1‑116 (MQ=255) ctgggacggaagtcgctgtcggtctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacatacaacactttcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACt > 1:61590‑M1/106‑149 (MQ=255) gggggCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttac < 1:570060‑M1/132‑20 (MQ=255) gggggCGCTACAAGGCTAGTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttac > 2:570060‑M1/1‑113 (MQ=255) ggCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgattttgtgtatgatggtg > 1:664269‑M1/1‑110 (MQ=255) cTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttt < 1:341385‑M1/149‑44 (MQ=255) cTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttactgtatgatggtgtttt > 1:576370‑M1/1‑106 (MQ=255) aagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACCGCCTAACTTCTGGTGGCCGCTGGCAATTACTGTTCTGttt > 1:571231‑M1/97‑149 (MQ=255) agggctATTACGGGGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGAGGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag < 2:160931‑M1/147‑48 (MQ=255) aaGTCTATTACGGCGGTAAAGTCGATCTCTGGGGACCACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag < 1:513068‑M1/149‑48 (MQ=255) cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacttagaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 2:725600‑M1/87‑149 (MQ=255) aCGGCGGTAAAGTCGAGCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGCCGCCGTTTTTGATTCTTTTACTTTCCAGCGCCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag < 2:30042‑M1/149‑57 (MQ=255) cttcaaaatcgggggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTc > 1:408059‑M1/84‑149 (MQ=255) cggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt < 1:582197‑M1/149‑58 (MQ=255) aaaatcggtgaagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGt < 2:735192‑M1/70‑1 (MQ=255) gTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGCCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtctgatggcgtttttgaggtgctcccgtggcttctgtt > 1:129758‑M1/1‑82 (MQ=255) tCGGTCTCTGGGGACAACGCTTTATGGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt < 2:192057‑M1/149‑69 (MQ=255) gagctctgggGACAACGCTTTCTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct < 1:521822‑M1/146‑71 (MQ=255) gATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttaatgatttagtgtatgatggtgattttgaggtgctccagtggcttctgtttct > 2:658348‑M1/1‑79 (MQ=255) tctGGGGACAACGCTTTATTGAAGTAGGGGCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca < 2:630149‑M1/149‑75 (MQ=255) ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGACTCTGGTCGGCGTGGTgcgg < 1:184681‑M1/83‑1 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAATCTGGTCGGCGTGGTgcgggc < 2:69382‑M1/85‑1 (MQ=255) gggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 2:513694‑M1/1‑71 (MQ=255) aaagtcatcgtgcattacctgaacataatacactatctataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGGTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGttt > 2:44700‑M1/58‑149 (MQ=255) aaCGCTTTATTGATGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct < 2:612713‑M1/149‑84 (MQ=255) aaCGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCATCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct > 2:527518‑M1/1‑66 (MQ=255) aCGCTTTATTGAAGTAGGGTCGGGGATGCCGACGATGATCTATATTTTTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc < 2:526536‑M1/149‑85 (MQ=255) tcatcgggcattatctgcacataaagcactatcaatatgttcgtgtcattgcgCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTATGGTCGGCGTGGTGCGGGCGGAGTTTTTAc > 2:404844‑M1/54‑149 (MQ=255) cattatctgaacataaaacactatcaataagttggaggcattaccCCAGCGTAATACTGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGCGCGGAGTTTTTACGTCctcct < 2:151129‑M1/104‑3 (MQ=255) aaGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta > 2:665277‑M1/1‑54 (MQ=255) aaGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta > 1:643584‑M1/1‑54 (MQ=255) aaGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcccccctgttcagcta > 2:185106‑M1/1‑54 (MQ=255) tgtggTCGGGTATGCCGACGCTGTTTTTGTGTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatctagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg < 2:324782‑M1/147‑99 (MQ=255) tctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTGACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGTCTGGATGAGTCTGGTCGGCGTGGTGGGGGCGGGGTTTTTACgtagtcgcattgt < 1:557055‑M1/109‑7 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctggttctatcagctggccctcctgttcagctactgacg < 2:654113‑M1/149‑102 (MQ=255) gaacataaaacgctatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGa > 1:275115‑M1/38‑149 (MQ=255) gaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGAGCGGAGTTTTTACGTACTCGTAATTTCGa < 2:38639‑M1/112‑1 (MQ=255) ggAAGCCGGCGCTGTTTTTGATTATTTTCCTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtcg < 1:591029‑M1/149‑108 (MQ=255) aacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCGATTCCTGTCTTGTTTGGCTGGATGAATCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTGCTCGTAATTTCGACTACATTc < 2:316484‑M1/120‑1 (MQ=255) gACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa > 2:431631‑M1/1‑35 (MQ=255) cggtgttTTTGATTATTTTCCTTTCCCGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgcgccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg < 2:106081‑M1/146‑117 (MQ=255) cTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc < 1:423184‑M1/149‑119 (MQ=255) tttttGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa > 2:287316‑M1/1‑28 (MQ=255) ataagttgtagtcattatcTCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGcaca > 2:35425‑M1/20‑149 (MQ=255) ttttGATTATTTTACTTTCCAGCGTCGggtgatgctgccaccttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa < 2:307230‑M1/149‑123 (MQ=255) aagttgggttcattaccCCAGGGTCGTACTGCCTAACTTCTGGTGGCTGCTGGCTATTACTGTCTTGTTTGGCTGGATGTGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAgg > 1:364050‑M1/18‑149 (MQ=255) ttGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgttttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgagacgtaccggcaaaagc > 2:29154‑M1/1‑25 (MQ=255) gctgcaggcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTGGACTACattcgtgcgggcacggcg < 1:288618‑M1/134‑9 (MQ=255) ttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGGGGTTTTACGTACTCGTAATTTCGCCGACATTCGTGCGGCACCGgcgc < 1:64323‑M1/135‑1 (MQ=255) gATTTTTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcgtctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac < 2:480067‑M1/149‑127 (MQ=255) tggatccactaccTCGGCGTCGTACCGCCTAACTGCGGGTGAGTGCTGGAAATTTCTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTTCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCt > 1:207524‑M1/14‑149 (MQ=255) attattTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc > 2:716865‑M1/1‑22 (MQ=255) ggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCtt > 2:774057‑M1/13‑149 (MQ=255) tattTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggaatctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgc > 2:414763‑M1/1‑20 (MQ=255) gagtcattaccCCAGGGTCGTTCAGCCTACCTTCTGGTGGCTGCTGGCAATTTCTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCCGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTg > 1:506437‑M1/12‑149 (MQ=255) attTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcgaaagcaccgcc > 2:768532‑M1/1‑19 (MQ=255) attTTACTTTCCACCGTCGggtgatgctgccaacttactgatttcgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcc < 1:135303‑M1/149‑131 (MQ=255) ttttACTTTCCAGCGTCGggtgatgatgcccacttactgatttagtgtatgatggtgtttttgaggtgctccagtggtttcggtttctatcagctgtccctcctgttcagctactgacgtggtggtgcgtaacggcaaaagcaccgccg < 2:470512‑M1/149‑132 (MQ=255) attaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTc < 2:640749‑M1/143‑1 (MQ=255) tttCCAGCGTCGggtgattctgccaaattactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc > 2:571495‑M1/1‑12 (MQ=255) accCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGc < 2:684433‑M1/146‑1 (MQ=255) cCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGTGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGa < 2:679165‑M1/148‑1 (MQ=255) cAGCGTCGggtgatgctgccaacttactgattttgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg < 1:470523‑M1/149‑142 (MQ=255) gtcgtTCAGCCAAACTTTTGGGGGCTGCTGGCAATTATTGGCGTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCTGGCGGAGTTTTTACGGACTCGGAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAg < 2:363889/149‑1 (MQ=255) gccgggcgatgccgccaacttaccgatttagtgtatgatggggtttctgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctat < 2:296846‑M1/147‑146 (MQ=255) ttgtACAGCCTAACTTCTGGTGGCTGCTGGCAATTGTTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGt < 2:76373/147‑1 (MQ=255) | TGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGT > CP009273/2269200‑2269492 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |