| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 4,362,541 | (G)5→4 | intergenic (+53/‑85) | groL → / → yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,362,537 | 0 | G | . | 98.8% | 366.9 / ‑0.0 | 84 | intergenic (+49/‑89) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base . (36/45); minor base A (0/1); total (36/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTT > CP009273/4362389‑4362680 | caccAAACGCATCGTTACCGACCTGCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATCTAATTGCCCTGCACCTCGCAGTAATATACAAACCCCCGGGCAGAAATGTCTg < 1:711758/149‑1 (MQ=255) cATGGTTACCGACCTGCCGAAAACCGATG‑AGCAGTTGGTAGCCGCGGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACATCGCCGATATCTAATAATCCACGGGCAGCAATGTCTggggcaaac < 2:875602/148‑6 (MQ=255) cATGGTTACCGACCTGCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTc < 1:1355737/149‑1 (MQ=255) ttACCGACCTGCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGAACAGTTGTCTGTGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTg < 1:997926/149‑1 (MQ=255) tatcgtactgctgAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTTGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTg < 2:292316/141‑1 (MQ=255) tACCGCCCTGCCGAAAACCGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTg < 2:658745/148‑1 (MQ=255) cGACCTGCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAACGTCT‑GGGGTGTTTCTTTTGGTCa > 1:505149/1‑149 (MQ=255) tGCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGGCT‑GGGGTATTTCGTTTGGTCATCttt > 1:1026379/1‑149 (MQ=255) gCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGGATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCttt > 2:270514/1‑148 (MQ=255) gCCGAAAAACGATGCAGCTG‑ACTTAGGCGCCGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCACCATGTGTGTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCttt < 2:492255/148‑1 (MQ=255) cGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCt > 2:298559/1‑148 (MQ=255) gAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTa > 2:949850/1‑148 (MQ=255) gAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAg < 1:689659/149‑1 (MQ=255) aaaCGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAAGGACT‑GGGGTTTTGCTTTTGGTCATCTTTCTAGtat > 1:32618/1‑149 (MQ=255) aaCGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGtat > 2:1241662/1‑148 (MQ=255) aaCGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGtat > 2:821784/1‑148 (MQ=255) aaCGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTGTTCTTTTGGTCATCTTTCTAGtcta > 1:368898/1‑149 (MQ=255) aCGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGCTTTCCCTTTGGTCATCTTTCTAGTGTaa > 1:589991/1‑149 (MQ=255) gATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGTGTTTTTCTTTTGGTCATCTTTCTAGTATAAGa < 1:73177/149‑1 (MQ=255) aTGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGGATAAGa > 2:715557/1‑148 (MQ=255) aTGCAGCTG‑ACGTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGa < 2:389891/148‑1 (MQ=255) aCTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGTTCATCTTTCTAGTATAAGATTCAGACACg < 1:833734/149‑1 (MQ=255) aCTTAGGCGCTGCCGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACACCCGGGATGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACg > 1:935966/1‑149 (MQ=255) ttAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAGTGGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAGTCAGACACgg > 2:820074/1‑148 (MQ=255) ttAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTCGTCTAAGATTCAGACACgg > 2:92114/1‑148 (MQ=255) tAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGga < 2:849017/148‑1 (MQ=255) gcgcTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGCTTCAGACACGgacgac > 1:578011/1‑149 (MQ=255) gcgcTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGCTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGgacgc > 2:1081383/1‑147 (MQ=255) cgcTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGacgacg > 1:611025/1‑149 (MQ=255) cgcTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGAAGTAATTACCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGAGACGGacgacg > 1:610806/1‑149 (MQ=255) ctgctgGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGAcgc < 2:874542/148‑1 (MQ=255) tgctgGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAAGGTCT‑GGGGTATATATTTTGGTCATCTTTCTAGTATAAACGTCAGACACGGACGAcgcg > 2:676450/1‑148 (MQ=255) gctgGCGGTATGGGCGGCACGGGTGGGATGGCCGGCATGATGTAATTGCCCTGCACCTCGCAGAAAGAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGTTTCAGACACGGACGACGCGa < 2:173109/148‑1 (MQ=255) ctgGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGAGTCAGACACGGACGACGCGAGt < 1:970427/149‑1 (MQ=255) ctgCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGGCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTg < 1:1175011/147‑1 (MQ=255) ggCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTgg < 1:705378/149‑1 (MQ=255) ggCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTg < 2:647274/148‑1 (MQ=255) cGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGc < 2:520078/148‑1 (MQ=255) tATGGGCGGCATGGGTGGTATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTc < 2:1080304/148‑1 (MQ=255) tATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTc < 2:454071/148‑1 (MQ=255) tATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTc < 2:927526/148‑1 (MQ=255) aTGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCa < 1:1152374/149‑1 (MQ=255) tGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAg < 1:1162974/149‑1 (MQ=255) ggcggcATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACCCGAGTGGCGTCCAGc > 2:1042550/1‑148 (MQ=255) cggcATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCGGCTc > 2:37941/1‑148 (MQ=255) cggcATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGGGGCGTCCAGccc > 2:996459/1‑146 (MQ=255) cggcATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGATTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGGGTGGCGTCCCGcaca > 1:1231281/1‑149 (MQ=255) tGGGTGGCACGGGCGGCGTGATGTAATTGCCCTGCCCCACCCAGAAATAAACACACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCAGCTTTCTAATAGGAGATTCATACACGGACGACGCGAGTGGCGTCCAGCTCATTGa < 2:453184/148‑1 (MQ=255) ggTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGAtt < 2:1053170/148‑1 (MQ=255) gTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTAt < 1:1189535/149‑1 (MQ=255) gCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATgg > 2:6572/1‑148 (MQ=255) gCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCAGTGATTATgg > 2:621305/1‑148 (MQ=255) gaTGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATggg < 2:555050/147‑1 (MQ=255) cATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGATTTTCTTTTGGTCATCTTTCTAGTATAAGATTCCGACACGGACGACGCGAGGGGCGTCCAGGTCATTGATGATggg > 2:318794/1‑148 (MQ=255) cATGGGCGGCATGATGTAAGTGCCCTGCCCCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATggg < 2:994208/148‑1 (MQ=255) gggCGGCATGATGTAATTGCCCTGCACCTAGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAAt > 1:834143/1‑149 (MQ=255) gcATTATGGAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACAt < 1:1358678/149‑1 (MQ=255) gcATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACa < 2:1167978/148‑1 (MQ=255) gcATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACAt < 1:1162136/149‑1 (MQ=255) cATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACAt > 2:147476/1‑148 (MQ=255) atgatgTAATTGCCCTGCAGCTCGCTAAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGc < 1:1262880/149‑1 (MQ=255) gatgTAGTTGCCCTGGACCTCGCGGAAATAACCAAACCCCCGGGCAGAAAGGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCAc < 1:98280/149‑1 (MQ=255) gatgTAAATGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTC‑GGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCAc < 1:296450/149‑1 (MQ=255) atgTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGGTGCGTCCACCCCATTGATTATGGGGAATAACATGCACg > 1:458572/1‑149 (MQ=255) atgTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTGTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCAc < 2:482978/148‑1 (MQ=255) atgTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGATTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCGGCTCGTTGATTATGGGGAATAACATGCAc > 2:89171/1‑148 (MQ=255) tgTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGt > 1:895115/1‑149 (MQ=255) ttGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGACTATGGGGAATAACATGCACGTaaaa > 2:549728/1‑148 (MQ=255) tGCCCTGCACCCCGCAGAAATAAACAAACCCCCGGGCAGAAATGTC‑CGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATa < 1:1318923/149‑1 (MQ=255) ccTGCTCCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACt < 2:740572/148‑1 (MQ=255) tCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGa < 1:1346027/149‑1 (MQ=255) aGAAATAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGt < 1:175197/149‑1 (MQ=255) aGAAAAAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGt < 1:42443/149‑1 (MQ=255) gAAATTAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGCGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTc < 1:607321/149‑1 (MQ=255) aaTAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCgg < 1:1203605/149‑1 (MQ=255) aaTAAACAAACCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCg < 2:593594/148‑1 (MQ=255) aacgaacCCCCGGGCAGAAAGGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGAATAAGATTCAGACACGGACGACGAGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGCTTGTCGgcgc > 2:148273/1‑148 (MQ=255) aacaaacCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGc > 2:1103581/1‑148 (MQ=255) aaacCCCCGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTCTGGGGAATAACATGCACGTAAAATACTTAGCGGGGATTGTCGGTGCcgcg > 1:210852/1‑149 (MQ=255) aaacCCCCGAGCAGAAATGTCT‑GGGGTTTTTCTTTTTGTCATCTTTCTAGTATAAGATTCAGACACGCACGACGCGAGTTGCGTCCATCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCcgcg < 1:616079/149‑1 (MQ=255) ccgcGGGCAGAAATGGC‑AGGGGTTCTTCATTTGGTCATTTTTCTAGTATTAGATTCAGACACGGCTGACGCGAGTGTCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTTAAATACTTAGCAGGGATTGTCGGTGCCGCGCTa < 2:133347/145‑1 (MQ=255) ccccGGGGGGAAATGGCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTa < 2:1184647/148‑1 (MQ=255) ccccGGGCAGAAATGTCT‑GGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTAc < 1:358395/149‑1 (MQ=255) ccGGGCAGAAATGTCT‑GGGGTTTTTCCTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTg > 1:333661/1‑149 (MQ=255) gAAGTGTCT‑GGGGTTTTTCTTTTGGTTATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATGGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCgg < 1:958014/149‑1 (MQ=255) gaaacggcgggggTTTCTCTTTTGGCCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCg < 2:1020171/140‑1 (MQ=255) ctGTCT‑GGGGTTTTTGTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGtt < 1:1038786/148‑1 (MQ=255) | CACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTG‑ACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTTTCTTTTGGTCATCTTTCTAGTATAAGATTCAGACACGGACGACGCGAGTGGCGTCCAGCTCATTGATTATGGGGAATAACATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTT > CP009273/4362389‑4362680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |