New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	NA (NA)	113 (1.610)	81/296	0.0	NA	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	= 360286	NA (NA)					intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

CACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTT  >  CP009273/360139‑360433                                                                                                                                                    |                                                                                                                                                    cacaCTACGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAATGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggcattg                                                                                                                                                    >  1:762279/1‑149 (MQ=255)     cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaa                                                                                                                                                >  2:1032550/1‑149 (MQ=38)        cGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTGTCGATTTATTTGATGCCCGGGGCATTGGGaatta                                                                                                                                             >  1:387325/1‑149 (MQ=255)           gCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaatt                                                                                                                                          >  2:391473/1‑149 (MQ=255)           agcaatgccaagCAACCTTCAAATCAGCTCCCGGCGGATTTGTCGTAGTCAGGAGAGCGTTCACACAAATACCACAGATAAAACGAAAGGCCCAGTATTTCAACTGAGCCTTTCGTTTTATTTGATGCGTGGGGAATTGGGcgttaatt                                                                                                                                          >  1:142741/12‑149 (MQ=11)             cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCt                                                                                                                                        <  2:723516/149‑1 (MQ=255)              gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCtt                                                                                                                                       <  2:491112/149‑1 (MQ=255)              gTTGCTTCGCAACGTTCAAAGCCGCGCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGTCTGGGGAATTGGGAATTAATTCtt                                                                                                                                       <  2:849864/149‑1 (MQ=255)               ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGCTAAAACGAAAGGCCCAGTCTTTCGACTCAGCCTTTCGTTTTATTTGATGCATGGGGGATTGGGAAGTAATTCTTg                                                                                                                                      >  1:115985/1‑149 (MQ=14)                tGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGa                                                                                                                                     <  2:711876/149‑1 (MQ=255)                   tccGCAACGTTCACATCCTTCCCCGGCGGATTTTTCCTGCTAAGGACAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCTGTCTTTCGACTGAGTCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  <  2:145639/147‑1 (MQ=17)                            ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGCCAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGACTGGGGAATTGGGTACTAGTACTTGatggcggatgtgt                                                                                                                         >  1:145639/1‑137 (MQ=11)                            ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  >  1:712757/1‑140 (MQ=255)                            ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  <  2:712757/140‑1 (MQ=255)                            ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGc                                                                                                                         <  1:1044946/149‑1 (MQ=255)                             tCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGcc                                                                                                                        >  1:3447/1‑149 (MQ=255)                                 atccgccgggagcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                                                                                    >  1:315267/12‑149 (MQ=255)                                     gCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATa                                                                                                                >  2:104696/1‑149 (MQ=255)                                           ggcggATTTGTCCTACTCAGGAGAGCGTTAACCGACAAACAACAGATAAAACGAAAGGCCCAGCCTTTCGACTGAGCCTTTCGTTTTAGTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCtc                                                                                                          >  2:743732/1‑148 (MQ=255)                                              ggATTTGTCCTACTCAGGAGAGCGATCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCGTTCGACTGAGCCGTACCGATTAGTTGAAGCCGCGGGAATAGGGAATTACTTCTTGAAGACGAGAGGGACCCGGGCTACGCCTacct                                                                                                       >  1:931985/1‑146 (MQ=17)                                                 tttGTCCTACTCAGGAGAGCGGTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTCTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTta                                                                                                    <  2:368679/149‑1 (MQ=255)                                                    gTCCTACCCAGGAGAGCGTTCTCCGAAAAACCACAGATAACACGAAAGGCCCAGTCTTTCGACAGAGCCTTTCGTTTTATTTATTGCCTGGGGAATTGGGCATTAATTCTTGATGACTTACAGGCGTCGCGTTACGCCTATCTTTATAg                                                                                                 >  1:703593/1‑149 (MQ=17)                                                     tCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAgg                                                                                                >  2:302842/1‑149 (MQ=255)                                                     tCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAgg                                                                                                >  2:389424/1‑149 (MQ=255)                                                          cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACCGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                           <  2:306966/149‑1 (MQ=255)                                                           tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATg                                                                                          >  1:1034053/1‑149 (MQ=255)                                                            cAGGAGAGCGTTCGCCGACAAACTATAGATACAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGt                                                                                         <  2:697187/149‑1 (MQ=255)                                                                agagCGTTCACCGACACACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTATTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGCAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATg                                                                                     >  1:22964/1‑149 (MQ=255)                                                                agagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATg                                                                                     <  2:929281/149‑1 (MQ=255)                                                                 gagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCGGTCTTTCGACTGAGCCTTTCGGTTTATTTGATGCCTGGGGAATTGGGAATTACTTCTTGAATGCGGGAGGGCCTCGTAATACGCCTATTCTTGTAGGttgccgtcctgg                                                                                    >  1:409778/1‑139 (MQ=18)                                                                      ttCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGa                                                                               >  2:550422/1‑149 (MQ=255)                                                                       tCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGAt                                                                              <  1:682247/149‑1 (MQ=255)                                                                        cACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATc                                                                             <  2:377243/149‑1 (MQ=255)                                                                          ccGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCa                                                                           <  1:131056/149‑1 (MQ=255)                                                                            gACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGc                                                                         >  2:908542/1‑149 (MQ=255)                                                                             ccaggcatcaaaTAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATACAGcc                                                                        >  2:1133940/12‑149 (MQ=25)                                                                             acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCGTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                        <  2:1122290/149‑1 (MQ=255)                                                                               aaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                      <  1:258751/149‑1 (MQ=255)                                                                                  caacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCATAGTGATACGCCTATTTTTCTATGTTAGTGTCATCGGAAGATGCAGCCGACCa                                                                   >  2:106244/1‑149 (MQ=25)                                                                                   aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCCCGTGAGACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAg                                                                  <  2:789578/149‑1 (MQ=255)                                                                                   aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTGTCGTTTTATTTGATGCCTGGGGTATTGGGGATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAGTCTCATGGGGCGATCCAGCCGACCAg                                                                  >  2:34095/1‑149 (MQ=37)                                                                                      aGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTCTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCCGGCt                                                               >  2:964784/1‑149 (MQ=255)                                                                                        aTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCttt                                                             >  2:532608/1‑149 (MQ=255)                                                                                         tAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTc                                                            <  2:3447/149‑1 (MQ=255)                                                                                           aaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCa                                                          >  1:178039/1‑149 (MQ=255)                                                                                             aCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgg                                                                                                                                                   <  1:702529/58‑1 (MQ=255)                                                                                             aCGAAAGGCCCAGTCTTCCGACTGAGCCTTTCGTTTGATTTGACACCTGGGGAATCGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACg                                                        <  1:169601/149‑1 (MQ=39)                                                                                              cGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGCATTGGGTATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGc                                                       >  2:227122/1‑149 (MQ=255)                                                                                                  aGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgc                                                   <  2:137164/149‑1 (MQ=255)                                                                                                     cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTg                                                <  1:582173/149‑1 (MQ=255)                                                                                                      ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAACGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGc                                               >  2:1117817/1‑149 (MQ=255)                                                                                                      ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGc                                               >  1:399213/1‑149 (MQ=255)                                                                                                         gTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATAATATCTACCAGGCTTTCCACGCCCGCGTGCCGc                                            <  1:535749/149‑1 (MQ=39)                                                                                                          tCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  >  2:380412/1‑62 (MQ=255)                                                                                                          tCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                  <  1:380412/62‑1 (MQ=255)                                                                                                           cTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTc                                          <  1:1032550/149‑1 (MQ=255)                                                                                                            gttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTcc                                         <  1:404060/148‑1 (MQ=255)                                                                                                             ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGCTACGCCTCTTTTTATAGGATCCCTTCTCGCTAAGATCCAGCCGACCGGGCTCTCCACGCCCGCGTGCCGCTCCa                                        >  2:547846/1‑149 (MQ=255)                                                                                                             ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCa                                        >  2:451015/1‑149 (MQ=255)                                                                                                             ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCa                                        >  1:998892/1‑149 (MQ=255)                                                                                                               cGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATACTGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATg                                      >  2:500614/1‑149 (MQ=255)                                                                                                                 gcTGAGGCTTGTGGTTGATTGGAGGCCTGGGGGATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTACTGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTc                                    <  1:1005052/148‑1 (MQ=255)                                                                                                                  ccgAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCCATTCATATGTGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCg                                   <  2:1070725/147‑1 (MQ=255)                                                                                                                     aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTc                                <  2:347533/149‑1 (MQ=255)                                                                                                                       ccTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTTCACGCCCGCGTGCCGCTCCATGTCGTTcgc                              >  1:751571/1‑149 (MQ=255)                                                                                                                       ccTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgc                              >  1:121511/1‑149 (MQ=255)                                                                                                                              ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtc                       >  2:976078/1‑149 (MQ=255)                                                                                                                               tttATTTGATTCCTGGGGAATGGCGAAATCATTCCTGAAGACGAAAGGGCCTCGGGATACGCCTATTTTCATAGGTTAACGTCACGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtct                      <  2:142741/149‑1 (MQ=255)                                                                                                                                 tATTCGATTCCTTGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATTTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCg                    <  1:909820/149‑1 (MQ=255)                                                                                                                                   tttGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGGTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTCCCGCTCCATGCCGTTCGCGCGGCTCTCGGa                  >  1:598583/1‑149 (MQ=255)                                                                                                                                     tGATGCCGGGGGAATTGGGAATTAACTCTTGAAGACCAAAGGGCCTCGTGATACGCCTATTTTTATCGGTAAAGGTGCTGGACAGGTCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGaaa                <  2:273338/149‑1 (MQ=255)                                                                                                                                      gATGCCTGGGGAATTGGGAATTCAGTCTTGAAGACGAAAGGGCCTCGTGATACGACTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAc               <  1:389375/149‑1 (MQ=255)                                                                                                                                      gATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCAGTTCCCGGAAAc               >  1:827183/1‑149 (MQ=255)                                                                                                                                        tGCCGGGGGAATTGGGAATTAATTCGTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgc             <  1:34095/149‑1 (MQ=255)                                                                                                                                           cTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCt          <  1:833693/149‑1 (MQ=255)                                                                                                                                            tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGTCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTg         >  1:777152/1‑149 (MQ=255)                                                                                                                                             ggggAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgcggcag        <  2:903340/149‑5 (MQ=255)                                                                                                                                             ggggAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGc        <  2:535052/149‑1 (MQ=255)                                                                                                                                                   ttgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt  <  2:315267/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTT  >  CP009273/360139‑360433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.