| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2812707 | 79 (1.130) | 6 (0.090) | 6/278 | 8.5 | 7.7% | intergenic (‑202/+33) | csrA/alaS | pleiotropic regulatory protein for carbon source metabolism/alanyl‑tRNA synthetase |
| ? | CP009273 | = 2812716 | 70 (1.060) | intergenic (‑211/+24) | csrA/alaS | pleiotropic regulatory protein for carbon source metabolism/alanyl‑tRNA synthetase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCACCACCCTTGCCGCCCACC > CP009273/2812571‑2812857 | cGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCAGTTAAACCTAAGATTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCAc > 1:776800/1‑149 (MQ=255) gCCAAAAAGTAAGCTATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACg < 2:149595/149‑1 (MQ=255) gCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACg > 2:503171/1‑149 (MQ=255) gCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACg < 2:439149/149‑1 (MQ=255) ccAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACgg < 1:2627/149‑1 (MQ=255) aaaaGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCAt < 2:1031067/149‑1 (MQ=255) aGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGAGACTGCACTGAAGCGAGTTCAAGCCCTTGc > 1:259380/1‑149 (MQ=255) aGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTCCCGGa > 2:366829/1‑149 (MQ=255) ctaTGACCAACCCACTACATCTAAACAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGCTTTACACAACTTCTGCCTGACTTTCTAGCAGACGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACg < 2:511588/147‑1 (MQ=255) cAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACg > 2:368618/1‑149 (MQ=255) cAATGACAAACACAATACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACg < 2:50123/149‑1 (MQ=255) aaTGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGc < 1:197901/149‑1 (MQ=255) aaaCACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTGAATGCGAATGCCGTGAACCGAGTCCAGGCCAATGCCTGTCGCTCatat > 1:1045841/1‑149 (MQ=255) acacATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATAAACACAACTTCAACCTGACTTTATTGTTTTCGATATCGCTAATGCGAATACCGTGAAGCGAGTCCACGGCCTTGCCTGACGCTTAtatta > 1:551344/1‑149 (MQ=255) cccagtACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTAtattat < 2:1027127/144‑1 (MQ=255) cacaTTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTCCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTAtattat < 2:837370/149‑1 (MQ=255) acaTTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGCCTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATattatt < 2:240053/149‑1 (MQ=255) acaTTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATattatt < 2:239870/149‑1 (MQ=255) ttACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCa > 2:60557/1‑149 (MQ=255) tCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTc < 2:988693/149‑1 (MQ=255) cTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGATAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTcg > 2:775278/1‑149 (MQ=255) aaGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTcgcg < 1:203607/149‑1 (MQ=255) aaGCAGTCATGGCATTACATTCTGTGAAACATAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGACTGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATGTTATTGTATTTTcgcg > 2:596116/1‑149 (MQ=255) aGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCTTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGa < 2:446518/149‑1 (MQ=255) aGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGa < 1:212675/149‑1 (MQ=255) aGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATACCGTTAATGCGAATGCCGTGAAGCGAGTCCTCGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGa < 2:823875/149‑1 (MQ=255) ggCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGc < 1:159482/149‑1 (MQ=255) ggCATGATATTCTGTTAAGCCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGc < 1:287955/149‑1 (MQ=255) ttACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCttt > 2:499131/1‑149 (MQ=255) accttCTGTTAAACCTAGGTTTAGCGGATAGACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTca < 1:574444/146‑1 (MQ=255) aCATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTca < 1:108880/149‑1 (MQ=255) cTGTTAAACCTACGTTTAGCCGATATACACAACCTCAACCTTACTTTATCGTTGGCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTcacaaag < 2:235052/149‑4 (MQ=255) cTGTTAAACCTAAGTTTAGCCGATATACACAACTGCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTg < 2:1109575/149‑1 (MQ=255) cTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCt > 2:423393/1‑149 (MQ=255) tAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACGCAGCCTTTCACACTGGCTAACGCTg > 2:704857/1‑149 (MQ=255) aggTTTAGCCCATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGc < 1:265013/147‑1 (MQ=255) aaGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGc > 1:370957/1‑149 (MQ=255) aaGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGc < 2:206244/149‑1 (MQ=255) aGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGACTCCACGGCATCGCCTGACGCTTATACTATTGCAATTCCGCGCTGCACCACCCTTTCACACGAGCCAACGCTGCa > 1:38453/1‑149 (MQ=255) tttAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTTTATTATTGCAGTTGCGCGCTGACCCAGCCTTTCACACTGGCTAACACTGCAgt > 2:19364/1‑148 (MQ=255) aGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTaa < 2:867114/149‑1 (MQ=255) gCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAg > 1:358052/1‑149 (MQ=255) ccGATATACACACCTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAgg < 2:900570/149‑1 (MQ=255) ccGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAgg < 1:412901/149‑1 (MQ=255) cacaACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCgcagca > 1:784517/1‑149 (MQ=255) accaCTTCCACCTGACGTTATCGTTGCCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGCCGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCAt < 2:872710/146‑1 (MQ=255) acaACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTACGGCCGCAGCAt < 1:1017015/149‑1 (MQ=255) aCTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCg > 1:170828/1‑149 (MQ=255) cTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGt > 2:242986/1‑149 (MQ=255) ttCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTACGGCCGCAGCATCCGTa > 1:692207/1‑149 (MQ=255) ttCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTa > 1:552091/1‑149 (MQ=255) aCCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTaccac < 2:466068/149‑1 (MQ=255) ctcTTGATCCTTGCCGATCGCGATAATGCTAGTGCCGTTAAGCGAGTCCACGGCACTGCTTGACGTTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACTCTGGCTAACGCTGCATGTAAGGCCGCAGCATCCGTACCACCGGc < 1:5649/147‑1 (MQ=255) aCTTTATCGTTGTCGATAGCGTTGATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCt > 2:630870/1‑149 (MQ=255) tttATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTg > 1:1020629/1‑149 (MQ=255) gTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATAATATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCAt < 2:776800/149‑1 (MQ=255) ttGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATg > 1:687196/1‑149 (MQ=255) cGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGCCGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAg < 2:377549/149‑1 (MQ=255) gATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAgg > 1:413446/1‑149 (MQ=255) gATAGCGTTAATGCGAATGCCGTGAAGCGAGAAACCCGCGTTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCCCACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCCgg > 1:250162/1‑149 (MQ=255) gTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTcc < 2:521027/149‑1 (MQ=255) ttAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTcca > 1:94188/1‑149 (MQ=255) ttAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTcca < 2:696874/149‑1 (MQ=255) ttAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCACGTCAGGACGTcca > 1:1091068/1‑149 (MQ=255) aTGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTccacca < 1:332954/149‑1 (MQ=255) gCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCaccacc > 2:488939/1‑149 (MQ=255) gCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCaccacc < 2:400890/149‑1 (MQ=255) gCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCaccacc < 2:401407/149‑1 (MQ=255) aTGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTACGCCTTGTCAGGACGTCCACCACCCTTg < 2:637114/149‑1 (MQ=255) cGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCCAGTCAGGCCGTCCACCACCCTTccccc > 1:303546/1‑147 (MQ=255) cGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCACCACCCTTgccgc > 2:124559/1‑149 (MQ=255) gTGAAGCGAGTCAACGGAATTGCCTCACGCTTATATTATTGCAATTTCGAGCTGACCCAGCCTTACACACTCGATAACGCTGCAGGTGAGGCCCCACCATCCTGACAACCGCATCGCGCCATGTCAGGACGTCCACCACCCTTgccacc > 1:93689/1‑149 (MQ=255) tGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCCTGTCAGGACGTCCACCACCCTTGCCGccc > 1:416780/1‑149 (MQ=255) tGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTGTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCGTGCGCCGTGTCCGGACGTCCACCACCCTAGCCGccc > 1:899014/1‑149 (MQ=255) gAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGCCCGTTCCTTGCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCACCACCCTTGCCGCCCa < 2:552091/149‑1 (MQ=255) aaGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCACCACCCTTGCCGCCCAc > 2:480083/1‑149 (MQ=255) aGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGCCCACCACCCTTGCCGCCCAcc > 1:274160/1‑149 (MQ=255) | CGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGCAGGTAAGGCCGCAGCATCCGTACCACCGGCTTGCGCCATGTCAGGACGTCCACCACCCTTGCCGCCCACC > CP009273/2812571‑2812857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |