New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4161731	60 (0.700)	14 (0.170)	6/292	11.5	16.7%	intergenic (+47/‑254)	rrfB/murB	5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding
	?	CP009273	= 4203090	81 (0.960)					intergenic (+3/‑72)	rrfE/yjaA	5S ribosomal RNA of rrnE operon/stress‑induced protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAAT  >  CP009273/4161587‑4161857                                                                                                                                                 |                                                                                                                               ggtGCCACCTGACCCCCTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCtgt                                                                                                                            <  2:1224522/149‑1 (MQ=25)  gtCCCACCTGACCCCATGCCGAACTCAGAAGTGACACGACGTATCGGCAATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCtgtt                                                                                                                           <  2:146104/149‑1 (MQ=11)  gcgccACCTGACCCCAGGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATATAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCtgtt                                                                                                                           <  2:819617/146‑1 (MQ=255)         cTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTc                                                                                                                    >  2:1342688/1‑149 (MQ=35)         cTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGGCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGGTGTATCTGTTGTTTGTc                                                                                                                    >  2:1177987/1‑149 (MQ=255)         cTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTACCGCCGATGGTAGTGTGGGGTCCCACCACGAGGGCGTAGGGAACGGGCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTc                                                                                                                    <  2:1195831/149‑1 (MQ=11)          tGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCg                                                                                                                   <  1:1192506/149‑1 (MQ=35)                cATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAAc                                                                                                             <  2:284659/149‑1 (MQ=35)                 aTGCCGAACTCATAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACg                                                                                                            <  2:672179/149‑1 (MQ=21)                     cGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGAGGGGTCTCCCCAGGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTCATCTGTTGTTTGTCGGTGAACGctct                                                                                                        <  2:719326/149‑1 (MQ=255)                      gAACGCAGGAGTGAAACGGCGTAGCGGGGATGGGAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCtctc                                                                                                       <  1:534040/149‑1 (MQ=11)                       aaCTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTcc                                                                                                      >  1:613753/1‑149 (MQ=35)                        aCTGAGAAGTGAAACGCCGTAGCGCCGAGGGTAGTGTGGGGTCGCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAACGGCTCAGTCGAAAGACTGGGCCCATCGTGGTAGCGGTTGTTTGTCGGTGAACGCTCTCCt                                                                                                     <  2:994445/149‑1 (MQ=11)                        aCTCAGAGGAGAAACGCCGTAGCGCCGATGGGAGTGTGGGTTCTCCCCATGCGAGAGCAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGCCTGGGACTCTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCt                                                                                                     <  2:422500/149‑1 (MQ=11)                          tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGa                                                                                                   >  1:937568/1‑149 (MQ=35)                           cAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAg                                                                                                  <  1:1170767/149‑1 (MQ=35)                            aGAAGTGAAACGCCGTAGCGCGGATGGTAGCGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCTTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGt                                                                                                 >  1:731059/1‑149 (MQ=255)                            aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGCAAGACTGGGCCTTTCGATTTATCTGTTGTTTGTACGTGAACGCTCTCCTGGGt                                                                                                 >  1:1111628/1‑149 (MQ=11)                            aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGt                                                                                                 <  1:544233/149‑1 (MQ=35)                              aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAg                                                                                               <  1:744418/149‑1 (MQ=35)                              aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAg                                                                                               >  1:342921/1‑149 (MQ=34)                                gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGa                                                                                             <  2:29155/149‑1 (MQ=35)                                 tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGGGTGGGGAACTGCCAGGCATCAAATAAACCGAAAGGCTCAGTCGAAGGACTGGGCCTTTCGGTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGGAGGAc                                                                                            >  1:1138147/1‑149 (MQ=11)                                 tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGGGTAGGAc                                                                                            >  2:902617/1‑149 (MQ=25)                                 tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGAc                                                                                            >  2:1252391/1‑149 (MQ=35)                                   aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCGTGAGTAGGAcca                                                                                          >  2:1008668/1‑147 (MQ=25)                                   aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACaa                                                                                          >  2:1111533/1‑149 (MQ=35)                                    aaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGCCTGGGCCTGTCGGTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACaaa                                                                                         >  2:985590/1‑149 (MQ=255)                                     aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAAt                                                                                        >  2:1096711/1‑149 (MQ=35)                                            aGCGCCGATGGTAGTTTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCgg                                                                                 <  1:873444/149‑1 (MQ=21)                                              cgcCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCgggg                                                                               >  2:585473/1‑148 (MQ=25)                                                ccGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGc                                                                             <  1:1002090/149‑1 (MQ=34)                                                ccGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGc                                                                             >  1:415544/1‑149 (MQ=35)                                                 cGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACCGCCAGGCATCAAATAAAACGAAAGGCGCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGAAATATCCGCCGGGAGCg                                                                            <  2:1208144/149‑1 (MQ=255)                                                  ggtggggctggggggTCGCCCCAGGCGAGAGTAGGGAACTGGCAGGCATCAAATAAAACGAAAGGCGCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCgg                                                                           <  2:1191079/138‑1 (MQ=11)                                                      gTAGTGTGGCGTCTCCACATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCGCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCGCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAttt                                                                       <  1:748353/149‑1 (MQ=255)                                                        aggggggggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGa                                                                     <  2:668144/144‑1 (MQ=25)                                                        aGTGTGGGGTCTCCCCATGCGAGGGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGa                                                                     <  2:1370284/149‑1 (MQ=21)                                                             ggggTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGCTTTGAACGtt                                                                >  1:1123171/1‑149 (MQ=25)                                                                 tctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGa                                                            >  1:367676/1‑149 (MQ=35)                                                                   tcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGGACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATGTGAACGTGGCGGAg                                                          >  1:147386/1‑149 (MQ=255)                                                                     cccATGCGAGAGTAGGGAACTGCCAGGCATCAAGTAAAACGAAAGGCTCAGTCGAGAGACTGGGCCTTTCGGTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTGGGACAAATCCGCCGCGAGCGGGTTTGAACGTTGCGAAGcc                                                        >  2:49056/1‑148 (MQ=11)                                                                       cATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAc                                                      >  1:1231237/1‑149 (MQ=32)                                                                       cATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGACGAAAGCCTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGGGCGGATTTGAACGGTGCGAAGCAAc                                                      >  2:909209/1‑149 (MQ=255)                                                                         tGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACgg                                                    >  1:1365507/1‑149 (MQ=32)                                                                           cGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGcttcgcaacgttc                                                  <  2:342921/149‑13 (MQ=255)                                                                             agatgaGGAAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCg                                                <  2:613753/144‑1 (MQ=12)                                                                                gTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGAGTGGGCCTATCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGGTTTGATCGTTGCGAAGCAACGGCCCgggg                                             >  2:878847/1‑147 (MQ=255)                                                                                 tAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAgg                                            >  1:514390/1‑149 (MQ=32)                                                                                   gggAACTGCCAGGCCTCAAATAAAACGAAAGGCTCAGTCGAAGGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGt                                          <  1:789145/149‑1 (MQ=17)                                                                                    ggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTg                                         >  1:1355188/1‑149 (MQ=32)                                                                                       aCTGCCAGGCATCAAATACAACGGAAGGCTCAGTCGAAAGACTGGGCCTTTCGTGTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGTTGGCg                                      <  2:1213166/149‑1 (MQ=255)                                                                                         tGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCggg                                    >  1:1358682/1‑149 (MQ=31)                                                                                         tGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCggg                                    <  1:861108/149‑1 (MQ=31)                                                                                          gCCCGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCATTTTATCTGTTGGTTGTCGGTGAACGCTCTCCTGAGTAGGACAAACCCGCCGGGAGCGGATTTGAACGTTGCGAACCAACGGCCCGGAGGGTGGCGGGc                                   <  2:959267/149‑1 (MQ=11)                                                                                                                agtcTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGcc             <  2:685366/146‑1 (MQ=1)                                                                                                                      aGTCGAAGGCCTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCAt       <  2:76326/149‑1 (MQ=17)                                                                                                                       gtctgatgACTGGGCGTCTCGTCTTATCTGTTGGTTGTGTGTGACCGCTCGCCGGAGGAGGACAAATTCCCCGGGGGCGGATGTGAACTTTCCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGTCGCCCGCCATAAACTGCCAGGCATc      <  2:460763/142‑1 (MQ=11)                                                                                                                          gAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCaaa   >  1:245258/1‑149 (MQ=31)                                                                                                                           aaaGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGGGGCGGGCAGGACGCCCGCCCTAAGCCCCCCGGCATCAAAt  >  2:448967/1‑149 (MQ=11)                                                                                                                                                 |                                                                                                                               GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAAT  >  CP009273/4161587‑4161857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.