| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4145500 | 18 (0.520) | 12 (0.370) | 10/256 | NT | 36.3% | coding (572/1005 nt) | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding |
| ? | CP009273 | 4145821 = | 25 (0.760) | coding (893/1005 nt) | argC | N‑acetyl‑gamma‑glutamylphosphate reductase, NAD(P)‑binding | |||||
TCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCAAA > CP009273/4145673‑4145964 | tCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGa > 2:52031/1‑149 (MQ=255)aactaaaagaagcgaatttgattgcggtgccgggctgttatccgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcga < 2:366552‑M2/1‑1 (MQ=255) tgACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTGCCGGCTCTGAAAAATGGCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTg < 2:424804/149‑1 (MQ=255) ggCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGa < 1:356987/143‑1 (MQ=255) atttcggtgccgggctgttatccgatggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcaggggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATtg < 1:225446‑M2/15‑1 (MQ=255) tCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTTAAAAATGTCGTTGGGATGACATTTTGTTATAGCAGGTGTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGAcc > 2:208238/1‑149 (MQ=255) tCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATtgtg > 1:440238/1‑143 (MQ=255) aGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCg < 1:384067/143‑1 (MQ=255) aGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGAGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACa > 2:59034/1‑149 (MQ=255) tgtTACAGCAGGTGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAACAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGAGTATTGTGGCGACCGaa > 1:306152/1‑143 (MQ=255) ttACAGTAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGa > 1:283451/1‑143 (MQ=255) cagcagGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACaa < 1:101167/143‑1 (MQ=255) cgacggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACt > 1:226177‑M2/107‑143 (MQ=255) acggcggcacagctggcgctgaaaccgttgattgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccgccagcggcgtgagcggtgcagggcgAGCATCTGAGTATTGTGGCGGCCGAAGACACCTTACGGa > 1:146357‑M2/105‑143 (MQ=255) ccATAACCCGCTGGTCCGCCGGTAGGACAAAGGCGCCCCGGCGCTGAAAAAGGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGcggcgg < 2:543581/149‑1 (MQ=255) ccATAAACCGCTGGTGCGGATGTATGACAAAGGCGATCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGGCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACCACTTACTGAAAGgcg > 1:5242/1‑143 (MQ=255) cTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCAGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATGTTGGCGACCGAAGACAACTTACTGAAAGGCGCggcggcgcc > 1:277270/1‑140 (MQ=255) gtgcctcgttgccAAAGGCGTTCCGGCGCGGAAAAATGTCGTTGGGCGGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGt < 2:522826/137‑1 (MQ=255) gCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGGTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCgg > 1:431751/1‑143 (MQ=255) aTGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGCCAACTTCCTGAAAGACGCGGCGGCCCAAGCGGTACAGGGAGCCAat > 2:592951/1‑149 (MQ=255) tGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTgcg < 1:10774/143‑1 (MQ=255) attgatgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTgcg > 1:44287‑M2/75‑143 (MQ=255) cAAAGCCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCAGTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTc < 2:534580/149‑1 (MQ=255) aaaGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCg > 2:44516/1‑149 (MQ=255) tgccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGt > 2:431821‑M2/70‑149 (MQ=255) gccgatcttcttgacctcaatcagtggccggtgatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGtt > 2:354237‑M2/69‑149 (MQ=255) aGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGGACAGGGCGCCAata > 1:465144/1‑143 (MQ=255) gCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTc > 2:384335/1‑149 (MQ=255) gCGTCCCGGCGCTGAAAGGGGTTGTGGGGTTGTCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGGCCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTc < 2:478796/149‑1 (MQ=255) gcgcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATGCGTTTCGGCTATGCGGAAACGCAGTCTCtt < 1:67527‑M2/107‑1 (MQ=255) gatcaacgccaccagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACCACTTACTGCAAGGCGCGGCGGCACAAGCGTTACAGTTCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCtt < 1:114174‑M2/107‑1 (MQ=255) tttGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGc > 2:531925/1‑149 (MQ=255) ccaccagcggcgtgagcggtgcagggcgAGCATCCGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACGAGCGGTACAGTGCGCCAATATTCGTTTCGGGTATACGGAAACGCAGTCTCTTCTGTAagt > 1:99779‑M2/29‑142 (MQ=255) cagcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCCATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGc > 1:241520‑M2/25‑143 (MQ=255) tatCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGAGCGGCAAGACGAGCCGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAGACGCAGTCTCTTATGTACGGGTGCa > 1:202566/1‑143 (MQ=255) gcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCCGTCTCTTATTTAAGGATGCAAtgatga > 2:556003‑M2/23‑149 (MQ=255) gcggcgtgagcggtgcagggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAAtgatga > 2:229029‑M2/23‑149 (MQ=255) tCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTACGGGTCCCatgcagaa > 2:300252/1‑144 (MQ=255) tGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACGGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCatta < 2:67404/149‑1 (MQ=255) ttCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTACGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATCAATcaaat < 1:150832/143‑5 (MQ=255) gggcgAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCaaa < 2:6240‑M2/144‑1 (MQ=255) | TCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAAGGGTGCAATGATGAATCCATTAATTATCAAA > CP009273/4145673‑4145964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |