| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1045234 = | 135 (1.150) | 99 (0.840) | 75/292 | 0.6 | 58.2% | intergenic (‑34/‑55) | gfcA/insA | O‑antigen capsule production threonine‑rich inner membrane protein/IS1 repressor TnpA |
| ? | CP009273 | = 1973123 | 7 (0.060) | intergenic (‑669/‑111) | flhD/uspC | flagellar class II regulon transcriptional activator, with FlhC/universal stress protein | |||||
GATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1045379‑1045234‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGT < CP009273/1973123‑1972977 GATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAA > 2:81657/1‑149 GCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATAATGCACTAAATGAGTAAGTTGGCAGCAGCACCTAAA > 1:300527/1‑144 CTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAATTCAGTACGTTGGCAGCATCACCTAAAGATAAT < 2:999460/149‑1 CTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAG < 1:633129/144‑1 TGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGGCAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAA > 1:907042/1‑144 TCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATT > 1:119472/1‑144 CGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATAAAATGAATCATTAAGTTGGCAGCATCACCTAAAGATAATTAATCAAT > 2:1844300/1‑149 GGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGACCAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAAT > 1:1817978/1‑144 gcagccCTTTTGCCGTCCCGTACCTCCCCTGCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATC < 1:1430181/138‑1 CAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCA < 1:524680/144‑1 GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAAT > 1:1515038/1‑144 GTGCTTTGGCCGGTACGCACCACCCCGTCACTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTAAAAAAAAAAAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAAT < 1:1096002/144‑1 GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCA < 1:1622648/144‑1 CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCACTCACTCCCG > 2:1924809/1‑149 TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAGATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGA < 2:537941/149‑1 CCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGG < 1:929801/144‑1 CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGGACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGT > 1:1286140/1‑144 TTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCAACTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGA > 1:562694/1‑144 ACGCACCTCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACTCTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGTTC < 1:452437/144‑1 ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAACACACCATCATATTCTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATC < 1:1471060/144‑1 GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGGAACAGAAGCCACTGGAGAACCTCAAAAACACCATCAAACACTAAATCAGTAATTTGGCAGCCTCCCCTAAAGATAATTAATCAGTCACTCCGGCTCATCAT > 1:465993/1‑144 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTT > 2:1019365/1‑149 ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGGGATGATATAATTT > 2:1134312/1‑149 CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGCTCATATAA > 1:1446303/1‑144 CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGACCATATAA > 1:1226801/1‑144 CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAA < 2:1504159/149‑1 CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGCAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAA < 2:555258/149‑1 CAGTATCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTCGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAAT < 2:1335477/149‑1 AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATT < 2:1237053/149‑1 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTA > 1:518521/1‑144 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAAT > 1:1841648/1‑144 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAAGGTAATTATAA > 2:831305/1‑149 TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAGCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTCATTATAAGg > 2:1457934/1‑148 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATA > 1:1580198/1‑144 GGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTA > 2:1576182/1‑149 GACAGCTGAAAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCACCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTAC < 2:1479591/149‑1 CAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTG < 2:385139/149‑1 CAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTG > 1:534767/1‑144 GCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAAATATAAGAAAAAAGAGTA > 1:857975/1‑144 CTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATT > 2:1673890/1‑149 CTGATAGAAACAGAACGCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTAC < 1:461607/144‑1 GATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTG < 1:1695046/144‑1 ATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTC > 2:345245/1‑149 ATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGA > 1:141783/1‑144 TAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCC < 2:1387522/149‑1 AGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATT > 1:1634770/1‑144 AAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCT > 1:1545565/1‑144 CAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCG < 1:674188/144‑1 CAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGAGAACAAAGAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTA > 2:950784/1‑149 AGCCACTGGAGAACCTGAAAAATACCATCATTCACTAAATCAGTAAGTTGGTAGCATTACCTAAAGATAATTAACCAAACACTCCCAGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATT < 1:607659/144‑1 GCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAA < 2:150548/149‑1 GCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTA > 1:1809003/1‑144 CCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATACGAAAATAGTGTACTGATTCTCCGCATTAAACAAG > 2:917959/1‑149 CACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGT > 2:841570/1‑149 CACTGGAGAACCTCAAAAACACCAGCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGT < 2:928398/149‑1 ACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTG < 2:584367/149‑1 ACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTG > 2:910447/1‑149 cttGAGAACCTCAAAAACACCATCATACACTCAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGG < 2:1049678/146‑1 ttGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAA < 1:925683/142‑1 TGGATAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCCTCATGAGAAGATAATTAATCAATCACTCCCGGTGATCATATAATGTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGT < 2:951321/149‑1 GAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGT > 1:797637/1‑144 AACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGT < 1:215988/144‑1 ACCTCAAACACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCTAAAGATAATTAATCAATCACTCCCGGTGATCATATATTTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTTCGCATTAAACAAGTGGTTAATAT < 2:1046802/149‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTA > 1:196705/1‑144 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTACTCAATCACTCCCGGTGATCATATACTTTCAAATGTAATTATAAGAAAATAGGGAACTGATTCTCCGCATTAAACAAGGGGTTAA > 1:458230/1‑144 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATAT > 2:101053/1‑149 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATAT > 2:514969/1‑149 CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAACTGTTTAA > 1:573687/1‑144 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTA > 2:1850479/1‑149 AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAACTAAAGAAATTTAATCAATCACTACCGGTGATCATATAATTTCAAATGTGATTATAAGAAAATAGTGGACTGATTCTCCGCATTAAACAAGTGGTTAGTATATGTA > 2:1367827/1‑149 AAAAACACCATCATACACGAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTA > 2:1455969/1‑149 AAAAAC‑CCCTCATACACTAAAACCGTAAGTGGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATA < 1:1181385/144‑1 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAA > 2:79914/1‑149 CCATCCTACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGAAGATATAATTTCAACTCAAATGATAAGAAAATAGTGTACTGATTCTCCTCATTAAACAAGTGATTAATATATGTAAAACATT < 2:1451679/149‑1 TCATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCA > 2:1700774/1‑149 ATACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGAGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAAactt > 1:996875/1‑140 TACACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCGTATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTAGTTAATATATGTAAAACATTTCATTA > 2:1324950/1‑149 ACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAAaa > 2:734927/1‑147 ACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCAT > 1:81755/1‑144 ACTAAATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCAT > 1:81441/1‑144 AATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAAC > 1:1604051/1‑144 AATCAGGAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAA < 2:1635766/149‑1 ATCAGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAG < 2:210332/149‑1 AGTAAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTG < 2:1700851/149‑1 AAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATT > 2:402501/1‑149 AAGTTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGT > 1:1365898/1‑144 TTGGCGGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGTATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGA < 1:750766/144‑1 TTGGCAGCATCACCTAAAGATAATTACTCAATCACTACCTCTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTT < 2:862978/149‑1 TTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTT < 2:131036/149‑1 TTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTT > 2:984709/1‑149 TTGGCAGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTACGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTT > 2:950135/1‑149 TTGGCAGCATCACCTAAAGATAATTAATCAATCAATCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTT > 2:479251/1‑149 AGCATCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTT < 2:1952241/149‑1 TCACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTT > 2:167651/1‑149 ACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTACAACGTTTCATTAACATTAAGTTGATTGTTGCCTTT < 1:399504/144‑1 ACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGGCTTT > 1:948799/1‑144 ACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTG > 2:1886224/1‑149 ACCTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTGCTTTG > 2:222724/1‑149 CCTAAAGATAATTAATCAATCACTCCCGGGGATCATATCATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACTAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGT < 2:116760/149‑1 GATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1045379‑1045234‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAATATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGT < CP009273/1973123‑1972977 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |