Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,388,2490TC20.7% 259.2 / 32.4 137T93A (ACT→GCT) nuoLNADH:ubiquinone oxidoreductase, membrane subunit L
Reads supporting (aligned to +/- strand):  ref base T (67/40);  new base C (0/28);  total (67/70)
Fisher's exact test for biased strand distribution p-value = 2.20e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 141 total aligned reads displayed.

CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACC  >  CP009273/2388101‑2388397
                                                                                                                                                      |                                                                                                                                                    
ccGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGt                                                                                                                                                      <  2:1423995/149‑1 (MQ=255)
 cGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTg                                                                                                                                                     <  2:1776258/149‑1 (MQ=255)
        catgacgtgctggTCGTCGGCAAGCACCAGACCCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGac                                                                                                                                                   <  1:1657896/133‑1 (MQ=255)
                    gTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGGACATG‑TAAATCAG‑GAAACCCACACCAGTGACCACCAAGAGCAt                                                                                                                                       >  1:1283426/1‑144 (MQ=255)
                    gTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGGTGGTGTAAGCGAAGAAGCGAGAGGAGCCCTCTTCCCCGCGCCTATACCAGGCGGCGTACATG‑TGAATAGG‑GAAAGCCACACCACTGACCCCCGAgcgcct                                                                                                                                       >  1:254924/1‑142 (MQ=255)
                     ttGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAg                                                                                                                                 >  2:1305460/1‑149 (MQ=255)
                          ggCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAACCCCACACCAGTGACCACCGAGAGCATGGTCAg                                                                                                                                 >  1:1022931/1‑144 (MQ=255)
                          ggCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTATTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCATACCAGTGACCACCGAGAGCATGGTCAg                                                                                                                                 >  1:1014184/1‑144 (MQ=255)
                            cAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGCGACCACGGGCcgcg                                                                                                                               >  1:702196/1‑144 (MQ=255)
                             aaGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATCCCAGGAGGCGTACATG‑TGATTTTG‑TTTTCACGCTCCGGCGACCACCGAGAGCATGGTCAGCGa                                                                                                                              <  1:1448116/144‑1 (MQ=255)
                             aaGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGc                                                                                                                         >  2:887666/1‑149 (MQ=255)
                              aGCACCAGAACCACCATGCTGGCGCTGACCAGGTTGGCGTAAGCGACGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGAc                                                                                                                             >  1:1263512/1‑144 (MQ=255)
                                cACCAGAACCACCATGCTGGCGATGGACAGATTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCCCCGAGAGCAGGGTCAGCGACGGGCCGt                                                                                                                      >  2:1029859/1‑149 (MQ=255)
                                cACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGGCAg                                                                                                                           >  1:616686/1‑144 (MQ=255)
                                cACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTCCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAg                                                                                                                           >  1:80217/1‑144 (MQ=255)
                                 aCCACAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCAACAGGCCGTc                                                                                                                     <  2:1238402/149‑1 (MQ=255)
                                  ccAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAGCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTcc                                                                                                                    >  2:197251/1‑149 (MQ=255)
                                  ccAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGc                                                                                                                         >  1:1802161/1‑144 (MQ=255)
                                  ccAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTcc                                                                                                                    <  2:1371815/149‑1 (MQ=255)
                                  ccAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGCCAGCGACAGGc                                                                                                                         >  1:1444284/1‑144 (MQ=255)
                                   cAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTAAGCGACAGACCGcccg                                                                                                                   >  2:69084/1‑148 (MQ=255)
                                     gAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGc                                                                                                                 >  2:1701169/1‑149 (MQ=255)
                                      aaCCCCCATTCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGTTTTTG‑GTTTACTGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTc                                                                                                                     <  1:472140/144‑1 (MQ=255)
                                      aaCCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGTGCATATACCAGGAGGCGTACATG‑TGTATTAG‑TTTTCACGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTc                                                                                                                     <  1:1242370/144‑1 (MQ=255)
                                      aaCCACCATGCTGGCGATGAACAGGTTGGTGTAAGAGAAGAATCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCa                                                                                                                <  2:1038094/149‑1 (MQ=255)
                                        ccaccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGATTTTT‑TTTTACTGCTCCGGCGACCACCGAGAGCATGGTCAGTGACAGGCCGTCCa                                                                                                                   <  1:1265742/144‑1 (MQ=255)
                                        ccaccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCAcc                                                                                                              <  2:1190882/149‑1 (MQ=255)
                                        ccaccaTGCCGGCAATGACCAGGTTGGTGTAACCCAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GATTAACGATCCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCa                                                                                                                   <  1:1483263/144‑1 (MQ=255)
                                         ccccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCa                                                                                                             <  2:74213/147‑1 (MQ=255)
                                         caccaTGCTGGGGATGAACAGGTTGGTGTAAGCGAGTACGAGAGTGTAGCCCTCTTCTCCGCGCATATACCAGGATGCGTACATG‑TGTTTTTGTTTTACCGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAg                                                                                                                  <  1:824972/144‑1 (MQ=255)
                                          cccctGCTGGCGATCAACAGGTTGGTGTAAGCGAAGCAGCGAGAGTAGCCCTCTTCCCCGCGCATGTACCAGGCGGCGTACATGTTTTTTTTT‑TTTAACGATA‑CGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGc                                                                                                                 <  1:560828/140‑1 (MQ=255)
                                           ccgtGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGATTTTG‑TTTTACCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCa                                                                                                                <  1:1292242/141‑1 (MQ=255)
                                           ccaTGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAgg                                                                                                           >  2:701326/1‑149 (MQ=255)
                                              tGCTGGCGATGAACAGGTTGGTGTAAGCGAAGCAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGTTTATG‑GTTTAACGATCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCa                                                                                                             <  1:49582/144‑1 (MQ=255)
                                                 tGGCGTTGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTCCACCGCGCATATACCAGGAGGCGTACATG‑TGATTATT‑GATTACTGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGt                                                                                                          <  1:1180978/144‑1 (MQ=255)
                                                 tGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTaaaa                                                                                                     >  2:376739/1‑149 (MQ=255)
                                                     gATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                 <  2:1179342/149‑1 (MQ=255)
                                                     gATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                 >  2:1167894/1‑149 (MQ=255)
                                                     aacgAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                 <  2:1583214/146‑1 (MQ=255)
                                                      aTGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt                                                                                                <  2:507108/149‑1 (MQ=255)
                                                          acgggTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATTAG‑GTTTCCCGCAACAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGa                                                                                                 <  1:908696/141‑1 (MQ=255)
                                                           cAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTaa                                                                                           >  2:895096/1‑149 (MQ=255)
                                                           cAGGTTGGTGGAAGCGAAGACGCGAGAGTAGCCCTCTTCACCGCGCATATACCCGGAGGCGTACATG‑TTATTTTG‑GTTAACCGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAt                                                                                                <  1:851804/144‑1 (MQ=255)
                                                              gTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTGGACA‑CTTAGAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGt                                                                                        <  2:1942288/149‑1 (MQ=255)
                                                                 ggTGTAAGCGAAGCAGCGAGAGTAGCCCTCTTCACCTCGCATATACCAGGAGGCGTACATG‑TGAATATG‑GAATCCTGCTACGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTaaa                                                                                          <  1:1832965/144‑1 (MQ=255)
                                                                    gtAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGAGGTTAAAGTc                                                                                       >  1:883830/1‑144 (MQ=255)
                                                                    gtAAGCGAAGAAGCGAGAGTAGCCATCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAAGAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGAGAGGCCGTCCAGCACCAGGTTAAAACCGAGGTTAAAgac                                                                                       >  1:619449/1‑142 (MQ=255)
                                                                     tAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGCCCAGCGACAGACCGCCCAGCACCAGGTTAAAAACGaagacaaaggcc                                                                                      >  1:1657251/1‑133 (MQ=255)
                                                                     tAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑GAAGTATG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTAc                                                                                 >  2:1545250/1‑149 (MQ=255)
                                                                      aagcgaggaagcgaggGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGATTAAG‑TTAACATGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGc                                                                                     <  1:221956/144‑1 (MQ=255)
                                                                      aaGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACCGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTAcc                                                                                >  2:810307/1‑149 (MQ=255)
                                                                      aaGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGCTAAAACCGAGGTGAAAGACGc                                                                                     >  1:763847/1‑144 (MQ=255)
                                                                      aaGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGCCCAGCCCCACGGTAAAACCGACGGAAAAGACGc                                                                                     >  1:682921/1‑144 (MQ=255)
                                                                      aaGCAAAGAAGCGAGAATAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTAcc                                                                                <  2:225134/149‑1 (MQ=255)
                                                                       aGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGACACGTACATG‑GGAATAAG‑AAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCGGCACCAGGTTAAAACCGATGGTAAAGTCGCCTACCg                                                                               >  2:1951548/1‑149 (MQ=255)
                                                                         cGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGAc                                                                             >  2:1070573/1‑149 (MQ=255)
                                                                               agCGGGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCAc                                                                       <  2:327754/149‑1 (MQ=255)
                                                                               agCGATAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAACCCGATGTTAAAGTCGCCTACCGACATCCAc                                                                       <  2:1556281/149‑1 (MQ=255)
                                                                                gCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGACCGTCCAGCACCAGGTTAAAACCGATGTTGAGGTCGCCTACCGACATCcgcg                                                                      >  2:418255/1‑149 (MQ=255)
                                                                                    gagTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑GGAATAAG‑GAAACCCACACCAGTGACCACCGGGATCATGGTCAGCGACAGGCCGTCCAGCCCCAGGTTAAAACCGATGTTAAATTCGCCTACCGACATCCACGTcaa                                                                  >  2:596610/1‑147 (MQ=255)
                                                                                    gagTAGCCCTCTTCACCGAGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCca                                                                  >  2:292835/1‑149 (MQ=255)
                                                                                            ctctTCGCCGCGCATAGACCTGGAGGCGTACATG‑TGTATATG‑TTTTCACGCTCCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAg                                                               <  1:348071/144‑1 (MQ=255)
                                                                                            ctctTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGGGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCAACAGCcgct                                                          >  2:91959/1‑149 (MQ=255)
                                                                                             tctTCACCGCGCATATACCAGGCGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCCCCGAGAGCATGGTCAGCGACAGGCCTTCCAGCACGAGGGTAAAACCGAAGTTAAAGACGCCTACCGACATCCACCTCgacccc                                                              >  1:1415414/1‑141 (MQ=255)
                                                                                              ctTCACCGCGCATATACCCGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctgg                                                        <  2:678429/149‑1 (MQ=255)
                                                                                              ctTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctgg                                                        <  2:974637/149‑1 (MQ=255)
                                                                                               ttCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggc                                                       >  2:1592661/1‑149 (MQ=255)
                                                                                                tCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggct                                                      <  2:162445/149‑1 (MQ=255)
                                                                                                 cACCGCGCGTATACCGGGAGGCGGACATG‑TGAATAAG‑GAAACCCGATCCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggct                                                          <  1:737978/144‑1 (MQ=255)
                                                                                                  aCCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGt                                                    <  2:487947/149‑1 (MQ=255)
                                                                                                    gccgctggttccAGTATGCGTACATG‑GGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTAt                                                  <  2:1374414/139‑1 (MQ=255)
                                                                                                     gcgcATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGGTAAAACCGAAGTTAAAGTCGCCTACCGACATCCACGTCCACAGCggctggct                                                      >  1:424835/1‑144 (MQ=255)
                                                                                                            taCCAGGAGGCGAACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTc                                          <  2:1699828/149‑1 (MQ=255)
                                                                                                             aCCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCAAGAGCATGGTCGGCGACAGGCCGTCCAGCACCGGGGTAAAACCGATGTTAAAGTCGCCTACCGACATCCGCGTCCACCGCGGCTGGCTGTATGTGTGCTCg                                         >  2:980301/1‑149 (MQ=255)
                                                                                                              ccAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGc                                        <  2:913844/149‑1 (MQ=255)
                                                                                                               cAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACCTCCACGTCCACAGCGGCTGGCCGTATGTCCGc                                            >  1:269551/1‑144 (MQ=255)
                                                                                                               cAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGcc                                       >  2:130511/1‑149 (MQ=255)
                                                                                                                 ggaggCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGGCCAGCACCAGGTTAAAACCGACGTTAAAGTCGCCTACCGACACCCACGTCCACAGCGGCTGGCCGTacggcggcca                                          >  1:207377/1‑135 (MQ=255)
                                                                                                                 ggagcCGTACATT‑TGAATAAG‑GATACCCGCACCGGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTc                                          <  1:640232/144‑1 (MQ=255)
                                                                                                                       gTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCga                               >  2:1308002/1‑149 (MQ=255)
                                                                                                                       gTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGGCCACAGCGGCTGGCTGTATGTGTGCTCGcgcatagggc                               >  2:340429/1‑140 (MQ=255)
                                                                                                                        tACATG‑TGAATAAG‑TAATCCCGACCCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTa                                   <  1:1031212/144‑1 (MQ=255)
                                                                                                                        tACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCGGGCTGTATGTCTGCTCGCCGTTAGCgaa                              >  2:892710/1‑149 (MQ=255)
                                                                                                                        gaCATG‑TGAATACG‑GAAACCCCCACCAGTGACCACCGGGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTa                                   <  1:813163/143‑1 (MQ=255)
                                                                                                                            tg‑tgAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGCCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGCTAGCga                               >  1:1654724/1‑144 (MQ=255)
                                                                                                                              gttatttcg‑gAATCCCACACCGGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCgaa                              <  1:1204116/136‑1 (MQ=255)
                                                                                                                                gAATAAC‑GAAACCCACACCCGTGACCACCTAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCa                       <  2:585043/149‑1 (MQ=255)
                                                                                                                                 aaTAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCaa                      >  2:1980804/1‑149 (MQ=255)
                                                                                                                                  aTAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAAc                     >  2:1509949/1‑149 (MQ=255)
                                                                                                                                  aTAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAAc                     <  2:1751869/149‑1 (MQ=255)
                                                                                                                                       cgAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGCCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCg                 <  2:490091/148‑1 (MQ=255)
                                                                                                                                          aaCCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGGCGGGAGAGGCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGCTAGCGAAGAAATCAACGc                   >  1:1469952/1‑144 (MQ=255)
                                                                                                                                            cccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAGCGCCg                 >  1:241466/1‑144 (MQ=255)
                                                                                                                                             ccACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAg           <  2:262646/149‑1 (MQ=255)
                                                                                                                                             ccACACCAGGGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAg           <  2:1121480/149‑1 (MQ=255)
                                                                                                                                              cccacCAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGAt               <  1:83420/142‑1 (MQ=255)
                                                                                                                                               acacCAGTGACCACCGAGAGCAGGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCCCGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAACCAACGCCGATAAAGGc         <  2:1254289/149‑1 (MQ=255)
                                                                                                                                                  ccAGTGACCCCCGAGAGCAGGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGt      <  2:460879/149‑1 (MQ=255)
                                                                                                                                                  acAGCGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAg           <  1:870817/143‑1 (MQ=255)
                                                                                                                                                      tGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGTGAAGAAATCAACGCCGATAAAGGCGGTTAcc  <  2:1394944/149‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CCGAGGTACATCAGCAGCAGGTTGTCGGCAAGCACCAGAACCACCATGCTGGCGATGAACAGGTTGGTGTAAGCGAAGAAGCGAGAGTAGCCCTCTTCACCGCGCATATACCAGGAGGCGTACATG‑TGAATAAG‑GAAACCCACACCAGTGACCACCGAGAGCATGGTCAGCGACAGGCCGTCCAGCACCAGGTTAAAACCGATGTTAAAGTCGCCTACCGACATCCACGTCCACAGCGGCTGGCTGTATGTCTGCTCGCCGTTAGCGAAGAAATCAACGCCGATAAAGGCGGTTACC  >  CP009273/2388101‑2388397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑