| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 70061 = | 45 (0.950) | 404 (10.900) +CGCGTACAACT |
85/80 | NT | 91.5% | intergenic (‑13/‑326) | araB/araC | L‑ribulokinase/DNA‑binding transcriptional dual regulator |
| ? | W3110S.gb | 236044 = | 51 (1.070) | intergenic (‑42/‑23) | rnhA/dnaQ | ribonuclease HI, degrades RNA of DNA‑RNA hybrids/DNA polymerase III epsilon subunit | |||||
Only 100 of 631 total aligned reads displayed.
AGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/70130‑70061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGATACCGAAACCA > W3110S.gb/236044‑236112 ||||||||||| AGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGAC < 1:2564438/71‑1 ATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGC < 1:2505039/71‑1 TTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCG < 1:3997496/71‑1 CGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACTCGTAC < 1:1032239/70‑1 GATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAAC > 1:2843352/1‑71 ATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGC < 1:1878874/63‑1 TCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTC < 1:1090039/71‑1 TCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTC < 1:377790/71‑1 CCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACG < 1:922463/60‑1 ACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGT > 1:1174780/1‑71 CTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCT < 1:2554594/71‑1 CTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCT < 1:2934720/71‑1 ACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGA > 1:4185041/1‑70 ACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGA < 1:7243/70‑1 ACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGA > 1:13433/1‑70 ACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGA > 1:3486756/1‑70 ACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAA > 1:688017/1‑59 CGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACA > 1:3316104/1‑71 CGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGA > 1:1784353/1‑69 CTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTC < 1:2428657/59‑1 TTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGAg > 1:1238177/1‑66 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAA > 1:3160198/1‑70 TTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAA > 1:169481/1‑59 TTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA > 1:2633614/1‑70 TTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA > 1:2595170/1‑70 TTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAAT < 1:4258539/70‑1 TTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAAT < 1:4298027/70‑1 TTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAAT < 1:3677874/70‑1 TATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGA > 1:1607213/1‑71 GCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC > 1:1071941/1‑71 ACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTAT > 1:4236301/1‑71 ACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTAT < 1:2219049/71‑1 ACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACAT < 1:476967/58‑1 ACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTAC < 1:4394135/42‑1 CTCTCTACTGTTTCTCCATACCCGTTTTTTTGGTCGCG < 1:1118905/38‑1 CTCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTA > 1:2118193/1‑67 TCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAAT > 1:1933389/1‑58 TCTACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAA > 1:3361574/1‑57 TACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGC < 1:4413075/69‑1 TACTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATG < 1:2010158/57‑1 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTG > 1:3107614/1‑71 CTGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATA < 1:1203623/51‑1 TGTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGC < 1:1988749/59‑1 GTTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGA > 1:2253157/1‑45 TTTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGA > 1:3265555/1‑53 TTCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAAT > 1:1421590/1‑71 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCTCTATGAGCAC > 1:3592803/1‑64 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAAT < 1:237870/70‑1 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC > 1:2156495/1‑64 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAAT > 1:296382/1‑49 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAAT > 1:1516000/1‑49 TCTCCATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAAT > 1:500581/1‑49 TCCATACCCG‑TTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGTACTGCAATTA < 1:2885882/69‑1 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTAC < 1:3569182/69‑1 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTA < 1:449350/68‑1 CATACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTA < 1:4026891/68‑1 TACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGC > 1:3825228/1‑71 TACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAAT > 1:3750445/1‑64 TACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAG < 1:837187/55‑1 ACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCAC < 1:2782040/57‑1 ACCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA > 1:2918157/1‑53 CCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGC > 1:3931188/1‑69 CCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGC > 1:3404727/1‑69 CCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGC > 1:3973277/1‑69 CCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACA > 1:530555/1‑66 CCCGTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCA > 1:4065467/1‑55 GTTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGC > 1:650071/1‑66 TTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGC < 1:3067087/65‑1 TTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCA > 1:1640419/1‑51 TTTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCT < 1:3297478/44‑1 TTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCG > 1:2988389/1‑71 TTTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGA > 1:2335173/1‑47 TTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGT > 1:319238/1‑71 TTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGT > 1:1841241/1‑71 TTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCG < 1:3694498/70‑1 TTTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCG < 1:788234/70‑1 TTTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGT < 1:4203623/70‑1 TTTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTT < 1:1386741/70‑1 TTGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTC < 1:3519260/70‑1 TGGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTC > 1:2688104/1‑71 GGACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTC < 1:3651910/70‑1 GACGCGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc > 1:3907024/1‑70 CGTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTA < 1:1968158/69‑1 GTACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGct < 1:1565404/67‑3 TACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGc < 1:2464659/65‑2 TACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCG < 1:4356132/58‑1 ACAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGc > 1:1294823/1‑69 CAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAA > 1:1002766/1‑71 CAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAA > 1:3219410/1‑71 CAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAA > 1:1441788/1‑71 CAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAA > 1:3863707/1‑71 CAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAA > 1:976820/1‑71 CAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTC < 1:3808708/59‑1 CAACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACA > 1:2736834/1‑46 AACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAAC > 1:1543712/1‑71 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAAC > 1:3022116/1‑70 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAAC > 1:593045/1‑70 ACTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTT < 1:2312770/56‑1 CTCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAACCA > 1:3442602/1‑71 TCAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGCTACCGCAAC < 1:933778/68‑1 ||||||||||| AGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/70130‑70061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGTCTGACATAAATGACCGCTATGAGCACTGCAATTACACGCCAGATCGTTCTCGATACCGAAACCA > W3110S.gb/236044‑236112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |